ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706974 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◣ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Zfp879
Kdm4c
Frmd4a
Sema6d
Zfp516
Mcf2
Gm4791
Sipa1l1
Spp2
Dct
Atg4c
Eml1
Dennd4a
Tagln3
Myt1
Olfr1532-ps1
Chmp1b
Prkab1
Ppia
Cdh12
Zkscan1
Ypel1
Etl4
Uts2b
Wee2
Cipc
Lmo3
Zfp608
Timm9
2700049A03Rik
Alkbh5
Lix1
Acyp1
Slc10a4
Apbb2
Apbb1
Lrmp
Ubiad1
Gnat2
Ubap1l
Vax1
Trp53bp1
Bhlhe22
Myo10
Mpp4
Rasl11a
Ush2a
Trex1
Fgd4
Sytl2
Bscl2
Knl1
Ankrd50
Tmem30c
Cibar2
a
Kifc3
Scml4
Igbp1b
Myh3
Arhgap36
Cdh6
Atxn7l1
Zfp869
Pkdcc
Cbx5
Zdhhc16
Exosc1
Fam149a
Iapp
Gm14325
Sacs
Lingo2
Lmo1
Dstn
Olfr122
Ccdc107
Commd4
1600014C23Rik
Dusp23
Ferd3l
Ppp6c
Raph1
Neurod1
Eef1akmt1
Clasp2
Ttc32
Alk
Fam110b
Arhgef33
Cep120
Oasl1
Kdm1a
Cdk14
Xrcc6
Desi1
Bco1
Tamm41
Fbxo31
Inpp4b
Acadl
Inip
Cyyr1
Chd7
Ctbp2
Rxrg
Sspn
Tsga10
Elmo2
Filip1
Atp6v1e2
Zfp97
Ccdc171
Nhsl1
Pgk1
Ascl1
Bambi
Bsx
Zcrb1
Pphln1
Tmco5
Angpt2
Ccpg1os
Asmt
Acbd5
Dennd11
Onecut2
Atp6v0a1
Abca4
Morf4l1b
Pdlim3
Gm5165
Gm51425
Btla
Zfp3
Rgs8
Ptprz1
Hacd4
Cyp2j12
Gm14410
Olfr107
Nol4
Laptm4b
Ndufaf4
Zeb2
Zfp960
Myo1b
Nutm1
Sh3glb2
Zfhx4
D7Ertd443e
Asf1b
Zfp931
Lama2
Tnks2
Plekhm1
Cnpy1
Mest
Foxp1
Phc1
Zfp260
Adar
Cdh20
Gm6710
Gm14391
Klf6
2510009E07Rik
Akr1b3
Tbr1
Stk33
Nup93
Zbtb18
Fgfr2
Slc25a25
Prpf40a
Mro
Lig3
Kcnj16
Zfp991
Mobp
Cul2
Olfr108
Mad1l1
Optn
Uqcc3
Gm38396
Gm14326
Chmp6
2210418O10Rik
Lipm
Prtg
Arid1a
Bnc2
Trafd1
Arhgef2
Rorb
Insyn2b
Zfyve26
Rad51b
Cyth1
Gspt1
Lpar6
Rln3
Mpzl1
Dpf2
Impdh2
Sfi1
Nr4a2
Foxa2
Pdlim1
Mrpl22
Eif4e1b
Taar9
Gm11837
Ranbp9
Gm14296
Lgals12
Fam222b
C2cd5
Ttc30b
Ubr5
Zfp984
Tbc1d9
Lrp2bp
Mrps28
Pcbp4
Rexo1
Krt222
Zfp473
Vrk3
Arap2
Slc9a9
Txndc2
Pclo
Pde4b
Otx2
Mageh1
Armc3
Kcnk2
Rnase9
Gm6712
Zc3h12c
Rdm1
Ccpg1
Ppp6r3
Bcar3
Osgin2
Fbxw2
Radil
Trim24
Olfr1240
Elavl2
Chn1
Tsc22d1
Vangl2
Acp6
Tyro3
Ttc23
Optc
Ebf2
Rdh11
Sec61g
Stk38
Bms1
Prps1
Pop4
Zfp980
Gcat
Sptlc2
Apobec2
Otx1
Riok3
Has2
Hesx1
Asic1
Ncoa4
Phlpp1
Spns1
Zbtb11
Ints4
Cep350
Neurog2
Thsd7a
Ptpn14
Unc13b
Nbdy
Rraga
Zfp985
Plekhg2
Fabp7
Hspa8
Zfp385b
Zmat4
Usp1
Gatad1
Cep112
Bag4
Ttc34
Lrpap1
Rgmb
Zcchc24
Tcf12
Tdg
Runx1t1
Crppa
Mlc1
Cep57
Tfeb
Selenos
Ccng1
H2-T23
Acpp
Gpr1
Arid4a
Mcur1
Tmem74
Wdr95
Cry1
Sulf1
Nkx3-2
Pak2
Tex2
Nars
Mcub
Rab5b
Sox4
Galc
Polr2m
Tcerg1
Rsph4a
Slc19a3
Gng3
Tesk2
Gm20594
Ccdc12
Sall1
Zranb1
Zfp212
Tuba1b
Med25
Gnai3
Gpx1
Sox5
Epb41l3
Abcd3
Gm13030
Rs1
Rcor1
H3c11
Serpine3
Schip1
Armc12
Fgf13
Bod1l
Fam32a
Anapc15
Wdr63
Eif3f
Gse1
Gm2007
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Msantd4
Lrrtm2
Rbfox2
Fmc1
Klhl24
Epha7
Marchf9
1700024G13Rik
Top3b
Tmem242
Zfp667
Aste1
Zfp534
Rpia
Maoa
Tbce
4930550C14Rik
Ccdc90b
Zfp981
Ldb1
Gapvd1
Sp5
Rufy3
Slco4c1
Ndst4
1110032F04Rik
Zfp995
Gm1604b
Snrpc
Sh2b2
Adam12
Ankrd10
Lrrc4c
Eml2
Arfgap2
Syt16
Slc10a6
Exoc3l2
Fyco1
Kctd16
Zmynd11
H2bc8
H2ac8
Poglut3
Neo1
Eif2b5
Iqschfp
Iqcj
Eda
Slc46a3
Ssr3
Nme7
Blzf1
Taf5
Myef2
Mbnl1
Fnbp1
Larp4
Zfp971
Add3
Trappc6b
Fzd7
Jmjd1c
Stx12
Pum2
Defb2
Nkx1-1
Ptgr2
Zfp182
Phactr2
Tcte3
Gm3448
Gm3417
Fip1l1
Ckap2
Arhgap12
Agk
Tfe3
Tbx6
Agtrap
Defb10
Prkcq
Slc22a17
Nkain3
Kmt5c
Nlrp9b
Ptpn3
Grb2
Edem1
Zbtb32
Sorbs2
Ywhab
Fbxo11
Chodl
Myog
Psd3
Prpf18
Plcxd1
Tbc1d5
Nrep
Trdn
Qser1
Nemf
Sall4
Rbm25
Mthfd1
Frmpd4
Thap4
Lgr4
Zfp944
Zfp758
Zfp451
Ascc3
Gm14322
Prkrip1
Gsc
Susd2
Plxdc2
Cdca7
Uhrf1bp1
Zfp317
Arhgap11a
Trappc6a
Bloc1s3
AB124611
Mpc2
Dcaf6
Lrrc9
Gm3435
Aqp3
Cnih4
Dusp10
1700056E22Rik
Lrrc57
Haus2
Ptms
3300002I08Rik
Rnft1
Triqk
Atg2a
Rapgef6
Marf1
Dusp4
Rhoh
Pls1
Ngef
Neu2
Galnt5
Rsu1
Zbed4
Hdac9
Leng8
Mfsd13b
Cdr2
Smu1
Prkacb
H3c6
H2bc22
H2ac22
Slain1
G2e3
Lpar1
Htr1d
Raly
Lrp6
Pcdhb12
Nucks1
Itgbl1
Klhl32
Gm45871
Zfp524
Pcdh15
Fiz1
Omt2a
Zfp946
Fggy
Vps11
2410141K09Rik
Robo3
Rps29
Cass4
Btbd17
Rnpc3
Mrpl15
Adamts10
Tpcn2
Tpbg
Ap3m2
Wls
H2bc3
BC107364
Mospd1
Stk11ip
Gxylt2
Cdh10
Zfp521
Slc44a3
Romo1
Pcdhgc4
Nfs1
Shc4
Trak2
Crybg1
Eif5b
Zmym4
Dclk1
Dcaf15
Helt
AI987944
H3c10
H2ac13
Dhx32
Ruvbl1
Smarce1
Elp5
Ctdnep1
Arhgef39
4930583I09Rik
Ermard
Cd38
Nell2
Efna1
Rad54l
Olfr235
Ngdn
Efemp2
Alg8
Tmem119
Scfd1
Slc4a8
Nf1
Prkag2
Rpl39
Zfp988
Sptbn1
Edn1
Prdm12
Rrm2
Olfm4
Cstf1
Rundc1
Ptges3l
Hoxa2
Gm3667
Zfp943
Zfp942
Eif3h
Dpf3
Evi5l
Pum1
Foxp2
Fbxo16
Zfp945
Ergic3
6430550D23Rik
Coa6
Otop3
Epc1
Ndnf
Dclk2
Cpvl
Zzef1
Cyb5d2
Cwf19l2
Osbpl3
Esyt1
Tcp11l1
Ubr2
Gnat3
Upf3b
F8a
Zfyve16
M6pr
Lbx1
Ppp2r3a
Itgb1
Sgcz
Trappc2l
Galns
Itgav
Tmcc1
Sh3gl1
Apela
Orc5
Elmo1
Ephb3
Brd2
Rcan2
Ubqln4
Il6st
Pdha1
Kcnab1
Gm14305
Rsrc2
Kntc1
Fxr2
Dpy19l3
Tenm2
Arnt
Nudt3
Cradd
Rftn2
Dars
Nfatc4
Dipk1a
Dbnl
Cdv3
Clcn3
Gramd1b
Iqsec1
Tex21
Morc3
Dusp6
Car13
Prr14
Farsa
C1galt1
Aff4
Baat
Zfp867
Mitf
Oser1
Dll3
Maco1
Nip7
Cog8
Col28a1
Chkb
Il34
Sdhaf3
Rps16
Nedd8
Gmpr2
Pdcl3
Phc2
Adarb2
9030025P20Rik
Mta3
Isy1
Cd200r1
Alyref2
Zkscan5
Adk
Mrps10
Krtap3-3
Wwp1
Rhpn2
Camsap2
Kmt5a
Samd9l
Osbpl1a
Zfp131
Lemd2
Actl6a
Ank2
Ttc37
Arsk
Dynlt1b
Ptpn4
Emc4
Anxa4
Lrriq4
Lrrc34
Insig1
Gtf3c6
Ube2j1
Usp32
Ip6k2
Cln5
Fndc5
Polr2a
Mcts1
Ubp1
Tmx2
Pcx
Med19
Atp5g1
Poc5
Lrrc28
Mynn
Hoxb1
Smarca5
Morn4
Zfp763
Vps36
Tmem94
Rap1b
Zfp982
Tbcel
Krt23
Ddx27
Stxbp5l
Trhr
Ptprg
Ctif
Tcaf1
Celf3
Veph1
Phf21b
Hdac5
Slc37a4
Nfatc3
Hdac4
Slc12a6
Npc1
Espl1
Uvrag
Top3a
Smcr8
Fbln5
Emilin1
Coq3
Osbp
Cdc23
Btf3l4
Sgpp1
Lmx1b
Cdk11b
Pxmp4
Hnrnpa1
Esrrg
Psat1
Phox2b
Mfap3l
Gem
Lmo4
Mc4r
Rubcn
Rps5
Tox2
Tceal8
Mageb3
Ctdspl2
Txnrd1
Vcp
Wdr44
Urgcp
Nupl1
Chmp5
Bag1
Lgi4
Asb4
Aldh9a1
1810058I24Rik
Snph
Endod1
Cox18
Prpf8
Hsd17b7
Lin28b
Itpr3
BC031181
Coq7
Ticam1
Pik3r4
Cnot3
Capn12
Gpm6a
Ankrd29
Yipf5
Golm2
Chd9
Ddx55
Tmco3
Slc25a10
Glra3
Eomes
Dcun1d2
Lrp10
Riox2
Bdh2
Zbtb12
Pitx1
Tma7
Ccdc51
Srsf7
Stra6
Zfp536
Tspyl2
Tomm20
Frzb
Fam161a
Elk1
Cfap126
Imp4
Ccdc115
Ppm1b
Calu
Mmp14
Fam53a
Zfp408
Ramp2
Emp1
Gcfc2
Etv1
Derl1
Sema6b
Mef2c
Hexim1
Spag9
Zfp609
Phf12
Nomo1
Erlec1
Asb3
Tedc2
Frmd4b
Ipcef1
Fam169a
Stoml2
Lars
Il5ra
Aqp4
Zdhhc24
Nt5c3
Gal3st3
Il17d
Pnn
Opa3
Camk4
Ubqln1
Slc4a2
Cdk5
C330007P06Rik
Zfp37
St3gal5
Atg16l1
Porcn
Fam214a
Smtnl1
Smarca4
Map2k7
Plch1
C77080
Adamts9
Zbed3
Hexim2
Dux
Anxa5
1810062G17Rik
Baz1a
Klhl5
Pdia6
CK137956
Arrdc4
Dnajc13
Rgs17
Ppm1k
Gm13212
Anp32a
Tle4
Cpd
Setd1b
Fzd2
Ripor2
Ccn6
Ppp1r12c
Olfr368
Lrrc23
Golga7
Gdap1
Senp7
Mlx
Mcc
Plekhb1
C330018D20Rik
Tpp1
H13
Lingo4
Sypl2
Map3k3
Amigo1
Magi2
Hjurp
A730008H23Rik
Soga3
Ppp1r10
Phospho2
Ino80
Ccdc173
Supt6
Sdf2
Lmbrd1
Hax1
Prr23a2
Prkg1
Kcnj13
Gbx1
Wdr27
1600012H06Rik
Inava
Mtf2
Mkrn3
Lsm6
Grn
Gpat4
Zfp976
Efcab2
Dusp5
Mansc1
Bves
4930453N24Rik
Klhl26
Slc45a3
Ric3
Nfatc2ip
Zc3h18
Trmt112
Prdx5
Nudt18
Kif3b
Lypd1
Get1
Bspry
Timm17a
Prune2
Arxes2
Zfp318
Tdrkh
Naa10
Tubb4b
Nras
Evl
2310033P09Rik
Tafa1
Rap2b
Plod2
Cdc20b
Ints9
Hmbox1
Tial1
Il10rb
Zswim1
Tcf3
Cln6