ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388067 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◣ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Nhsl1
Sipa1l1
Atg4c
Zfp879
Mcf2
Gm4791
Lmo3
Ascl1
Frmd4a
Neurod1
Spp2
Pgk1
Kdm4c
Sema6d
Bambi
Lrmp
Zfp608
Lmo1
Tmem30c
Mpp4
Sytl2
Zfp516
Tmco5
Onecut2
Ypel1
Gnat2
Ttc32
1600014C23Rik
Uts2b
Bsx
Nutm1
Rasl11a
Prkab1
Eml1
Cdh12
Cbx5
Ccdc107
Zcrb1
Pphln1
Zkscan1
Tagln3
Dennd11
Alkbh5
Arhgef33
Ccpg1os
Ccpg1
Wee2
Atp6v0a1
Morf4l1b
Zeb2
Pkdcc
Timm9
2700049A03Rik
Sh3glb2
Acbd5
Kifc3
Knl1
Dennd4a
Arhgap36
Trp53bp1
Gm5165
Ctbp2
Eef1akmt1
Adar
Pdlim1
Raph1
Acadl
Cyp2j12
Myo1b
Zfp3
Stk33
Pdlim3
Mro
Gm14325
Lipm
Gm14410
Dpf2
Hacd4
2510009E07Rik
Prpf40a
Tamm41
Fgfr2
Rgs8
Tnks2
Ptprz1
Asf1b
Chd7
Lig3
Phc1
Zfp931
Trex1
Zdhhc16
Exosc1
Plekhm1
Lix1
Eif4e1b
Angpt2
Cyth1
Etl4
Cnpy1
Abca4
Cyyr1
Gpr1
Tbr1
Ppia
Zfp960
Apbb2
Cul2
Dusp23
Apbb1
Gm38396
Ubiad1
Nol4
Cdh20
Mrpl22
Rexo1
Gm51425
Kcnj16
Sptlc2
Btla
Chmp6
Htr1d
Oasl1
Lama2
Akr1b3
Fgd4
Sacs
Gm11837
Bag4
2210418O10Rik
Gm14296
Epb41l3
Chmp1b
Nr4a2
Bhlhe22
Gm14326
Filip1
Pde4b
Arhgef2
Tyro3
a
Cipc
Zbtb18
Ttc23
Larp4
Smu1
Rhpn2
Impdh2
Fbxo31
Mad1l1
Exoc3l2
Qser1
Ebf2
Slc25a25
Acp6
Phactr2
Cep350
Gnai3
Radil
Krt222
Nkx1-1
Insyn2b
Zfyve26
Rad51b
Myh3
Ubr5
Spns1
Pcbp4
Rgmb
Rdm1
Ankrd50
Olfr235
Nbdy
Nup93
Unc13b
Asmt
Slc9a9
Bscl2
Gng3
Mpzl1
Zfp451
Klf6
Has2
Tsc22d1
Rdh11
Gspt1
Stk38
D7Ertd443e
Ppp6r3
Tcf12
Ssr3
Xrcc6
Desi1
Prtg
Zcchc24
Nars
Ckap2
Rorb
H2-T23
Zfp991
Tbc1d9
Zfp980
Gatad1
Vax1
Optn
Lmo4
Zfhx4
Gm6710
Gm14391
Kcnk2
Prps1
Zfp212
Trim24
Zfp97
Zfp984
Apobec2
Zbtb11
Alk
Ldb1
Pclo
Otx2
Fbxw2
Foxp1
Sspn
Inpp4b
Olfr1240
Rsph4a
Kcnab1
Mest
Kdm1a
Olfr108
Osgin2
Lgals12
Zc3h12c
Ccdc171
Ptpn14
Slc10a4
Inip
Rxrg
Arap2
Atxn7l1
Gm6712
Zmat4
Zfp182
Mbnl1
Pop4
Zfp985
Abcd3
Foxa2
Serpine3
Zfp869
Hesx1
Ap3m2
Arid1a
Zfp988
Laptm4b
Mrps28
Zfp385b
Ccdc12
Ptms
Dct
Tbce
Otop3
Tex2
Snrpc
Gm13030
H3c10
H2ac13
Itgb1
C2cd5
Arhgap11a
Nrep
Tuba1b
Maoa
Hexim1
Scml4
Zranb1
Ttc30b
Cep120
Tfeb
Top3b
Lpar6
Nemf
Runx1t1
Nkx3-2
Cibar2
Bnc2
Ttc34
Eif2b5
Defb10
Nlrp9b
Tpbg
Sertad4
Lrp2bp
Rcor1
Schip1
Tmed1
Sfi1
BC031181
Lrrc57
Haus2
Olfr107
Bms1
Gm2007
Tmem242
Prkrip1
Fbxo16
Acpp
H2bc22
H2ac22
Phlpp1
Ptgs2
Zfp944
Zfp758
Trappc6a
Bloc1s3
Raly
Commd4
AB124611
Slc4a2
Cdk5
Ccdc90b
Bcar3
Baz1a
Fam149a
Elavl2
Marchf9
Rpia
Sh3gl1
Zfp473
Vrk3
Neurog2
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Fmc1
Slco4c1
Prpf18
Fggy
Rpl39
Cpvl
Myt1
Mpc2
Dcaf6
Dpf3
Apela
Rln3
Hnrnpa1
Marf1
Fam222b
Tdg
Anapc15
Mcub
H3c11
4930550C14Rik
Fam110b
Cry1
Taf5
Rbm25
Tesk2
Rs1
Fgf13
Wdr63
Psd3
Crybg1
Tcerg1
Eif5b
Helt
Zfp260
Arid4a
Tmem74
Bod1l
Klhl32
Ranbp9
Slc46a3
Cdv3
Efemp2
Golm2
Ints4
Trappc6b
Mfsd13b
Cdr2
Sema6b
Nucks1
Txndc2
Usp1
Lrpap1
Efna1
Eomes
Gcat
Fabp7
Clasp2
Zmynd11
Plxdc2
Epc1
Yipf5
Pnn
Thsd7a
Chkb
Armc3
Eif3f
Adam12
Ankrd10
AI987944
Nell2
Dbnl
Poc5
Cep57
Cradd
Nkain3
Edem1
Zkscan5
Vps11
Zfyve16
Chn1
Vangl2
Zfp534
Dipk1a
Nup85
Rraga
Gpx1
Shc4
Phox2b
Lingo2
Arfgap2
Gm45871
Robo3
Slc4a8
Samd9l
Il18
Bco2
Polr2m
Zfp995
Mtfr2
Plekhg2
Alyref2
Fam53a
Trafd1
Wls
Dars
Thap4
Gapvd1
Prepl
Selenos
BC107364
Mageh1
Syt16
Ptgr2
Leng8
Rhoq
Sox4
Tcte3
Gm3448
Gm3417
Gm3435
Lrrc9
Ruvbl1
Emc4
Phf21b
Cdk12
Zfp981
Uhrf1bp1
Sptbn1
Urgcp
Gnb2
Cwf19l2
Pdha1
Slc10a6
Nme7
Blzf1
Ush2a
Rad54l
Rps24
Triqk
Erdr1
Cd38
Gtf3c6
Poglut3
Add3
Cactin
Farsa
Uqcc3
Aqp4
Ppp1r12c
C1galt1
Ube2d3
Lrrc23
Itgbl1
Rps5
Gpat4
Sulf1
Espl1
Ilf2
Zfp609
Mcur1
Rbfox2
Clcn3
Zscan30
Ppp1r10
Msantd4
Gm14322
Cnih4
Lsm6
1700024G13Rik
Egln2
Ndufaf4
Mobp
Taar9
Ubap1l
Myo10
Iapp
Dstn
Olfr1532-ps1
Rnase9
Elmo2
Acyp1
Optc
Sec61g
Otx1
Riok3
Asic1
Ncoa4
Atp6v1e2
Hspa8
Cep112
Crppa
Mlc1
Ccng1
Wdr95
Pak2
Rab5b
Galc
Slc19a3
Gm20594
Sall1
Med25
Sox5
Ferd3l
Armc12
Fam32a
Gse1
Lrrtm2
Klhl24
Epha7
Cdh6
Zfp667
Aste1
Sp5
Rufy3
Ndst4
1110032F04Rik
Ppp6c
Gm1604b
Sh2b2
Lrrc4c
Eml2
Fyco1
Kctd16
H2bc8
H2ac8
Neo1
Iqschfp
Iqcj
Eda
Cdk14
Myef2
Fnbp1
Zfp971
Fzd7
Jmjd1c
Stx12
Pum2
Defb2
Fip1l1
Arhgap12
Agk
Tfe3
Tbx6
Agtrap
Prkcq
Slc22a17
Kmt5c
Ptpn3
Grb2
Zbtb32
Sorbs2
Ywhab
Fbxo11
Chodl
Myog
Plcxd1
Tbc1d5
Trdn
Sall4
Mthfd1
Frmpd4
Lgr4
Bco1
Ascc3
Gsc
Susd2
Cdca7
Zfp317
Aqp3
Dusp10
1700056E22Rik
3300002I08Rik
Rnft1
Atg2a
Rapgef6
Dusp4
Rhoh
Pls1
Ngef
Neu2
Galnt5
Rsu1
Zbed4
Hdac9
Prkacb
H3c6
Slain1
G2e3
Lpar1
Lrp6
Pcdhb12
Zfp524
Pcdh15
Fiz1
Omt2a
Zfp946
2410141K09Rik
Rps29
Cass4
Btbd17
Rnpc3
Mrpl15
Adamts10
Tpcn2
H2bc3
Mospd1
Stk11ip
Gxylt2
Cdh10
Zfp521
Slc44a3
Romo1
Pcdhgc4
Nfs1
Trak2
Zmym4
Dclk1
Dcaf15
Dhx32
Smarce1
Elp5
Ctdnep1
Arhgef39
4930583I09Rik
Ermard
Ngdn
Alg8
Tmem119
Scfd1
Nf1
Prkag2
Edn1
Prdm12
Rrm2
Olfm4
Cstf1
Rundc1
Ptges3l
Hoxa2
Gm3667
Zfp943
Zfp942
Eif3h
Evi5l
Pum1
Foxp2
Zfp945
Ergic3
6430550D23Rik
Coa6
Ndnf
Dclk2
Zzef1
Cyb5d2
Osbpl3
Esyt1
Tcp11l1
Ubr2
Gnat3
Upf3b
F8a
M6pr
Lbx1
Ppp2r3a
Sgcz
Trappc2l
Galns
Tsga10
Itgav
Tmcc1
Orc5
Elmo1
Ephb3
Brd2
Rcan2
Ubqln4
Il6st
Gm14305
Rsrc2
Kntc1
Fxr2
Dpy19l3
Tenm2
Arnt
Nudt3
Rftn2
Nfatc4
Gramd1b
Iqsec1
Tex21
Morc3
Dusp6
Car13
Prr14
Aff4
Baat
Zfp867
Mitf
Oser1
Dll3
Maco1
Nip7
Cog8
Col28a1
Il34
Sdhaf3
Rps16
Nedd8
Gmpr2
Pdcl3
Phc2
Adarb2
9030025P20Rik
Mta3
Isy1
Cd200r1
Adk
Mrps10
Krtap3-3
Wwp1
Camsap2
Kmt5a
Osbpl1a
Zfp131
Lemd2
Actl6a
Ank2
Ttc37
Arsk
Dynlt1b
Ptpn4
Anxa4
Lrriq4
Lrrc34
Insig1
Ube2j1
Usp32
Ip6k2
Cln5
Fndc5
Polr2a
Mcts1
Ubp1
Tmx2
Pcx
Med19
Atp5g1
Lrrc28
Mynn
Hoxb1
Smarca5
Morn4
Zfp763
Vps36
Tmem94
Rap1b
Zfp982
Tbcel
Krt23
Ddx27
Stxbp5l
Trhr
Ptprg
Ctif
Tcaf1
Celf3
Veph1
Hdac5
Slc37a4
Nfatc3
Hdac4
Slc12a6
Npc1
Uvrag
Top3a
Smcr8
Fbln5
Emilin1
Coq3
Osbp
Cdc23
Btf3l4
Sgpp1
Lmx1b
Cdk11b
Pxmp4
Esrrg
Psat1
Mfap3l
Gem
Mc4r
Rubcn
Tox2
Tceal8
Mageb3
Ctdspl2
Txnrd1
Vcp
Wdr44
Nupl1
Chmp5
Bag1
Lgi4
Asb4
Aldh9a1
1810058I24Rik
Snph
Endod1
Cox18
Prpf8
Hsd17b7
Lin28b
Itpr3
Coq7
Ticam1
Pik3r4
Cnot3
Capn12
Gpm6a
Ankrd29
Chd9
Ddx55
Tmco3
Slc25a10
Glra3
Dcun1d2
Lrp10
Riox2
Olfr122
Bdh2
Zbtb12
Pitx1
Tma7
Ccdc51
Srsf7
Stra6
Zfp536
Tspyl2
Tomm20
Frzb
Fam161a
Elk1
Cfap126
Imp4
Ccdc115
Ppm1b
Calu
Mmp14
Zfp408
Ramp2
Emp1
Gcfc2
Etv1
Derl1
Mef2c
Spag9
Phf12
Nomo1
Erlec1
Asb3
Tedc2
Frmd4b
Ipcef1
Fam169a
Stoml2
Lars
Il5ra
Zdhhc24
Nt5c3
Gal3st3
Il17d
Opa3
Camk4
Ubqln1
C330007P06Rik
Zfp37
St3gal5
Atg16l1
Porcn
Fam214a
Smtnl1
Smarca4
Map2k7
Plch1
C77080
Adamts9
Zbed3
Hexim2
Dux
Anxa5
1810062G17Rik
Klhl5
Pdia6
CK137956
Arrdc4
Dnajc13
Rgs17
Ppm1k
Gm13212
Anp32a
Tle4
Cpd
Setd1b
Fzd2
Ripor2
Ccn6
Olfr368
Golga7
Gdap1
Senp7
Mlx
Mcc
Plekhb1
C330018D20Rik
Tpp1
H13
Lingo4
Sypl2
Map3k3
Amigo1
Magi2
Hjurp
A730008H23Rik
Soga3
Phospho2
Ino80
Ccdc173
Supt6
Sdf2
Lmbrd1
Hax1
Prr23a2
Prkg1
Kcnj13
Gbx1
Wdr27
1600012H06Rik
Inava
Mtf2
Mkrn3
Grn
Zfp976
Efcab2
Dusp5
Mansc1
Bves
4930453N24Rik
Klhl26
Slc45a3
Ric3
Nfatc2ip
Zc3h18
Trmt112
Prdx5
Nudt18
Kif3b
Lypd1
Get1
Bspry
Timm17a
Prune2
Arxes2
Zfp318