ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21482114 | Ganglion cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◣ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Tal2
Eipr1
Ms4a10
Rgl3
Cryzl2
Tcstv3
Zc3hav1l
Txndc11
Enpep
Kcng3
Rbmxl1
Slc10a7
Rtn4rl1
Dph1
Msra
Dhx32
Sp1
C2cd2l
Hinfp
Zfp979
2610528J11Rik
Zfp638
Aqr
Smim8
Gpn1
4930548H24Rik
Eomes
Lemd1
Slc45a3
Rspry1
Psme3ip1
Stx3
Pmvk
Wdr89
Phc2
Polr3k
Stk11ip
Scap
Bmerb1
Ifitm7
Zfp980
Setd1b
Rhof
Fam50b
Zfp600
Neurog1
Zbtb8a
Otop1
Cryba2
Cbx4
Snrpn
Snurf
Thap4
Frzb
Tex12
Il18
Bco2
Usp28
Trim24
Anp32e
Irf1
Homer3
Kpna1
Glod5
Brox
Aida
Pou5f1
Mreg
Zfp623
Sugct
Mplkip
Vkorc1l1
Gbx2
Nuak2
Gm815
Adnp
Mex3a
Rab25
Lin28a
Tec
Septin4
Mindy4
Nufip2
Epb41l5
Rps6ka2
Tac4
Sacs
Dedd
Ero1b
Slc16a3
Dnmt3a
Npas2
Greb1
Zfp960
Cyp51
Cacna2d4
Lrtm2
Zfp658
Syce3
Gpx4
Sash1
Gdf5
Cep250
Fgf6
Ttc41
Hsp90b1
Stk38
Sox2
Rabl3
Gtf2e1
Khsrp
Slc25a41
Myo10
Calr3
1700030K09Rik
Klf2
Cstf1
Aurka
Esrrg
Prelp
Optc
A330070K13Rik
Alpl
Phc1
Lypla1
Trh
Scaf4
Tmem154
Clec12a
Foxd4
Rex2
Pim2
Ccdc194
Sfxn1
Myh9
Mbtps2
Hsbp1
Usp37
Plcd4
Hnrnpr
Pgap6
Mrpl28
Pcyt1b
Nifk
Gmnc
Prr14
Slc22a18
Cdkn1c
Setx
Asb1
Gm7932
Ccdc85c
Nkx2-6
Tomm20
Mtcl1
Irgm2
Frem2
Tdh
Gm10634
Bcl2a1d
Plekhg1
Olfr1058
Tdgf1
Lrrc2
Hscb
Chek2
Ptpn18
Ell2
Kat7
Zfp219
Tmem253
Glra1
Mcidas
Ccno
Nfkbiz
Pdgfra
Skil
Nfkb1
Cngb1
Tepp
Zbtb38
Lrrn2
Nanog
Ear10
Tdrd12
Fgf15
Prex1
Ifitm1
Plekhb2
Fgd2
Zfp142
Bcs1l
Mtch1
Etfbkmt
Fzd8
Kif21a
B4galnt2
Chpf2
Abcf2
Fam25c
Fbxw4
Olfr1431
Mllt6
Nudt13
Surf6
Rpl7a
Med22
Plcd1
Zcrb1
Pphln1
Tmem218
Cxxc5
Lima1
Olfr883
C1qa
Gpr1
Cd37
Rps19
Lypd4
Dmrtc2
Shmt2
Nxph4
Polr2e
H2bl1
Zmym4
Myrf
Myd88
Acaa1a
Abca4
Car14
Tmem143
Syngr4
Slc2a1
Trim2
Mphosph8
Olfr1339
Cnot1
Sap30bp
Recql5
Tet2
Twf2
Itga5
Ankrd36
Ppfia1
Zfp180
Sgk1
Dmtn
Ankrd6
Prcc
Dpp6
Ppp2r2d
Mapk1ip1
Fsbp
Gba
Jakmip1
Ska2
Prr11
Slc24a5
6720489N17Rik
Rab43
Lefty1
Mmut
Cenpq
Virma
Plch2
Lce6a
Trp73
Nrf1
Zyg11b
Slc39a7
Rxrb
Ring1
H2-Ke6
Gm3604
Zfp9
Ncoa2
Mansc4
Gm5165
Hip1
Ing2
Zfp574
Grik5
Cplx3
Ulk3
Ear1
Eif5a2
Srek1
Sfi1
Eif4enif1
Phyhd1
Hesx1
BC107364
Spata20
Epn3
Sufu
Actr1a
Soat1
Macroh2a1
Gse1
Naa80
Ifrd2
Hyal3
Lsmem2
Gtf2ird1
Defb11
Rif1
Cotl1
Ugt8a
Arhgef18
Xkr4
Mcf2
Tstd1
Usf1
Schip1
Cma2
Tma7
Ccdc51
Atrip
A930007A09Rik
Tspan9
Fgf5
Hoxc13
Nhlh1
Tmeff1
Bhlha15
Apol7e
Gtpbp6
Plcxd1
Zfp605
Fgl2
Gpc6
Otud7a
Shroom3
Prss30
Ogn
Dhrs7b
Ccm2
Tm9sf4
Myo18a
Ptma
Prickle1
Cdk5r2
Epp13
Zfp791
Odaph
N4bp2l2
Pds5b
G6pc2
Cdh1
Casq2
Galnt16
Bub1
Tgfb3
Ift43
Epop
Ptrhd1
Cenpo
Zfp97
Kcnj12
Commd7
Pla2r1
Tor3a
Arhgap32
Zfp988
Kctd7
Ppp2cb
Fgfr2
Sulf1
Mtf2
R3hdm4
Kiss1r
Med16
Palmd
Lrrc4c
Bcl9l
Txlng
B4galt6
Eif1ad
Banf1
Hoxb1
Eloa
Gsn
Podxl
Magi1
Rnf207
Rpl22
Pifo
Nfat5
Trim35
Itgb8
Ypel2
Foxa1
Zfp386
Dtx2
Hvcn1
Vrtn
E030030I06Rik
Tle6
Pde1b
Poc5
Tap2
Psmb8
Tap1
Cpsf6
Slc29a1
Wnt7b
Id3
Tef
Rbm44
Calml4
Irgm1
Zfp946
Fabp12
Zfp622
Tmem88
Naa38
Cyb5d1
Cox7a2l
Zfp36l1
Mdm4
Myc
Supt6
Sdf2
Tdpoz7
Tdpoz5
Trp63
Adgrv1
Slc35b1
Cgnl1
Mrps28
Raet1e
Raet1a
Hs6st1
Trpm7
Tcf7l1
Trim33
Ctdsp1
Morc3
Zfp972
Alg8
Npcd
Cbx6
Pkdcc
Leap2
Uqcrq
Gdf9
Kazn
Arhgef26
5430403G16Rik
Apod
Slc19a3
BC052040
Olfr1388
Olfr1387
Gm5796
Inppl1
Folr2
Igf2
Ins2
Cybb
Cldn34d
Men1
Map4k2
Ephx2
Col6a6
Sall4
Slc7a3
Ift140
Cramp1l
Rab1a
Tefm
Ctxn2
Heatr1
Invs
Erp44
Rpl35a
Lmln
Iqcg
Tnrc6b
Olfr995
Tprgl
Megf6
Sdk1
Ppp1r1a
Tbc1d25
Znfx1
Rps23rg1
Klf3
Tmem52b
Cd300e
Os9
Dlx1
Cwc25
1700001P01Rik
Pes1
Xxylt1
Nfrkb
Lclat1
Tcf20
Tbc1d5
Prrx1
Fzd10
Vps25
Ramp2
Pklr
Oas1g
Cdc42ep3
Vmn2r23
Kdm2b
Pcdhgc4
Pcdhgc3
Pcdhgc5
Rpl32
Rgs22
D7Ertd443e
Vps8
Slc9a9
Polr3b
Riok2
Tmem125
Gpr142
Btbd17
Zfp729a
Hk1
Smim7
Dusp6
Kcnj9
Sox12
Fhl3
Sf3a3
Neurog2
Snx11
Cbx1
Anxa11
Rfx4
Car5a
Banp
Nipbl
Cep170b
Qser1
Fxn
Krt12
Krt20
2410141K09Rik
Gm38396
Zfp58
Mthfs
Pnpla6
Rere
Zfp871
Pdlim2
Fam120a
Olfr1358
Ccnd2
Qrich1
Qars
Olfr1312
Gm51425
Zkscan14
Zkscan5
Sdhb
Rcn3
Ccn2
Gm13212
Pik3r4
Klf16
Dtd1
Smim26
Aqp2
Pbx3
Nkx3-1
Zscan22
Mettl15
Kif18a
Lhx9
2310009B15Rik
Akr1c21
Amotl2
Irf2bpl
Ubtf
Sgce
Peg10
Per2
Abcc4
Fev
Fgd4
Fgf4
Dusp4
Barhl1
Marchf9
Cdk4
Cyp27b1
1810013L24Rik
Ppp1ccb
Ppp1cc
Tuba1b
Foxi3
Mab21l1
Parp10
Grina
Ctcf
Zfp428
H4f16
H2aj
Olfr57
Efnb2
Camk2n1
Fam110a
Nynrin
Mettl3
Rnf32
Imp4
Ccdc115
Ddb2
Tigd2
Crb2
Gja1
Sirt4
Pla2g1b
Sall2
Zfp93
Chmp4b
Otub2
Tmem159
Dnah3
Add1
Hspa9
Lsm4
Lrrn1
Pip4k2a
Smad7
Tob2
Arfip1
Drosha
6030458C11Rik
Srxn1
Stoml2
Pigo
Olfr806
Ppp1r16b
Vmn2r12
Zfp317
Porcn
Miga1
Ralgds
Il17rd
Usp33
Prtg
Thyn1
Acad8
Ssbp3
Psd3
Pitx2
Kcnmb2
Pax5
Lef1
2810021J22Rik
Yipf1
Dio1
Idh1
Pikfyve
Cstf3
Lta4h
Vmn2r85
Tmem145
Prr19
Pafah1b3
Plxdc1
Nlgn3
Zfp990
Armcx1
Hnrnph2
Gla
Chp2
Igsf10
B3gnt7
Mcl1
Mmp9
Il25
Cmtm5
Efs
Plin3
Cep120
Ube2h
Stk35
Laptm4b
Gng13
Rpusd1
Chtf18
Mslnl
Rp2
Mis18bp1
Npepps
Npc1
Tomm7
Rdh12
Cdan1
Rin2
Nmur1
Rbbp7
Grasp
Caprin2
Slc39a14
Dock1
Srsf11
Lrrc40
Enpp3
Cyp2d12
Smim19
Slc20a2
Mars1
Tjp2
Oscar
Ndufa3
Mecp2
Bbs1
Nupl1
H2bc6
H1f4
Ldlrap1
4932438A13Rik
Phf23
Gabarap
Dvl2
B4galt1
Cdiptos
Cdipt
Duxbl3
Duxbl2
Duxbl1
Sh3bp4
Bcar3
Ptpn4
Slc36a3
Actr3b
Smchd1
Thoc3
Lrp2
Chrna1
Prdm10
Gm7244
Pex14
Dffa
Snx6
Zc3h11a
Zbed6
Gm3696
Osr2
Usp3
Tarbp2
Map3k12
Hexb
Sft2d1
Ets1
Npff
C1qb
Hsd3b4
Gm10681
Zfp36l2
Gm21693
Gm21677
Gm21704
Spata24
Sobp
Epb41l1
Ccz1
Pole3
Alad
4933430I17Rik
Sv2b
Hnrnph1
P2rx7
Fam78b
Gm4450
Med6
Rrs1
Adhfe1
Dcaf12
Rbmy
Gm21708
Slc38a9
Ddx4
Cdyl
Coq8a
Emc7
Tmem255b
D1Pas1
Prss48
Sp2
Arnt
Rnf157
Pax6
Gbp6
Ptp4a2
Mideas
Ucn2
Pla2g7
Pcdhgb8
Pcdhga12
Serinc5
Stk3
Dennd2a
Tmco6
Cd14
Tmem131l
Glrx2
Gng2
Cux2
Nectin1
Hsd11b2
Gnmt
Igfbp2
Galntl6
BC030500
Gm3173
Zfp36
Plekhg2
Bod1l
Ubxn6
Hdgfl2
C1qtnf12
Akr1e1
Ptpn13
Zfp808
Pias1
Ifitm5
Ifitm2
Ogdh
Asic4
Defb1
Htr2a
Slc44a5
Zbtb7b
Pten
Zfp987
Zfp985
Pdk1
Gripap1
Kdm4c
Tor4a
Olfr1065
Cd209a
Cnn3
Gcnt2
Dbn1
Olfr794
Slc4a5
Klhl18
Kif9
Ago2
Plcd3
Acbd4
Fbxo11
Ppp2r1a
Myh14
Ctdsp2
Cd160
Pdzk1
Ptch1
P2rx1
Pank2
Lmo2
Gdf15
Naaa
Rps27a
Clhc1
Mas1
Mrgprh
Fbxo22
Dapp1
Cs
Snx9
Gas1
Dpp10
Snrpc
Ncor1
Olfr339
Cltb
Diaph1
Gm3558
Atp6v1fnb
Atp6v1f
Gucy2g
Car2
Nt5e
Zfyve1
Dmbx1
Bbs4
D8Ertd738e
Zswim4
Abcd2
Wrap53
Trp53
Mbp
Sult2a3
Fam178b
Plxnc1
Gm36712
Cds2
Wdr5
Utp6
Tmem230
Pcna
Dnase2a
Srgap2
Fam72a
Bphl
Acin1
1700123O20Rik
Gamt
Dazap1
Aatk
Trir
Get3
Slc5a11
Best2
Lrrc18
Scg2
Gng8
Aqp4
Ptgir
Naf1
Dspp
Ubp1
Grhpr
Ptgr2
Dusp1
Ndufs8
Mycn
Tcirg1
Kng2
Chd9
Plxnb1
Hells
Meis2
Sephs1
Sgk2
Ppif
Olfr1263
Olfr1262
Tmem231
Gabarapl2
Zfp934
Erbb4
Atp5mpl
Tdrd9
Gsc2
Ess2
Nr6a1
Gm10778
C130073F10Rik
Ankrd24
Grm4
Parp9
Dtx3l
Spef1l
Ccdc30
H2-M5
2410137M14Rik
Fam214b
Osbpl2
Cipc
Ppp1r15b
Zfp128
Smim43
Ctbp2
Trim62
Rnh1
Memo1
Slx4ip
Mkks
Tspan31
Zfp955a
Agap2
Brdt
Tmem79
Tescl
Glmp
Hint3
Btg4
Pcnx3
Map3k11
Slc47a2
Exosc6
1700001C19Rik
AI661453
Ppp1r10
Mrps18b
Atat1
Slc30a6
Il31ra
Flt4
AB010352
Slc7a7
Mettl8
Dcaf17
Hspa1b
Hspa1l
Hspa1a
Tmem107