ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499143 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◣ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Nup153
Tprn
Tmem203
Ndor1
Usp3
Hdac2
Sde2
Idh1
Pikfyve
Usp4
Gpx1
Pard6a
Acd
Carmil2
Psmg1
Zfp513
Snx17
Eif2b4
Odc1
Susd6
Srsf2
Mfsd11
Mettl23
Ppp1r1b
Sertad3
Scamp3
Fam189b
Nfyc
Rpia
Pcbp1
Uba2
Prkrip1
Etfbkmt
Myh10
Ccdc126
Crx
Lrch4
Fbxo24
Cdkn1a
Tma7
Ccdc51
Atrip
Asns
H4c12
H2bc15
H2ac15
Abi2
St3gal2
Nfkb1
Rhobtb3
Ube2z
Insr
Rundc3a
Kcnc3
Cdkl4
Phf13
Thap3
Zfp280d
Anapc15
Tomt
Lamtor1
Casq1
Igsf8
Zdhhc22
Mga
Rptor
Gna11
Tle5
Zmynd19
Dda1
Mrpl34
Abhd8
Dnajb12
Unc45a
Hddc3
Pcif1
Adnp
Hnrnph1
Caprin1
Cic
Ubxn7
Ubqln1
Dclre1b
Ap4b1
Alkbh5
Gm12248
Cnot8
Zfp979
A4galt
Rbm4b
Morf4l1
Ptpru
Mecr
Ttc38
Alpl
Rnh1
Ralgds
Chfr
Elf1
Wbp4
Acacb
Cdk12
Med1
Park7
Kmt2c
Yeats2
Ubr5
Actr1b
4933424G06Rik
Pcbp4
Abhd14b
Gpr62
Klhdc8b
Ccdc71
Gpr84
Ccne2
Rac1
Mcf2l
Cfl1
Id1
Pfdn1
Arl8b
Ilf3
Cfap44
Msl2
Fscn1
Trim23
Trappc13
Shld3
Phf12
Mthfr
Clcn6
Arl15
H4c9
H2bc11
H2ac11
H2bc12
H2ac12
H2-T24
Csrp1
Tm9sf4
Cngb1
Tepp
Plin3
Tpp1
Taf10
Yjefn3
Tssk6
Ndufa13
Ncor2
Rbm39
Catspere2
Phf21a
Srrm2
Eif5
Lzts1
Elf2
Csk
H4c11
Hbp1
Zfp775
Repin1
Gm5111
Zfp768
Erbb3
Cpz
Tmpo
Trim17
H3f4
H2bu2
H2aw
Cbx8
Amotl2
Ramac
Mpp2
Ppy
Abhd10
Tcstv3
Zbtb8a
Mcl1
Oplah
Wdr78
Mier1
Smpd3
Sav1
Raly
Arnt
Glrx3
Ube2g1
Fam107a
Mbd2
Slc16a4
Dalrd3
Wdr6
Pard6b
Trim59
Hesx1
Rpl32
Ppig
Ppp1ccb
Ppp1cc
Mapkapk2
Miga1
Atp1b2
Vps37d
Dnajc30
Bud23
Il4ra
Pbld2
Hnrnph3
Sec14l1
Wbp2nl
Srsf1
Teddm1a
Glul
Smarca4
Hsd11b2
Ddx50
Eif3h
Usp9x
Scd2
Ankrd10
Ywhag
Cuedc1
Igf2bp1
Ano6
Npepps
P4htm
Rtn2
Cma2
Trim6
Kifc2
Cyhr1
Foxh1
Ppp1r16a
Rsl1d1
Cyrib
Zfp689
Usp40
Ppp1r36
Ubb
Cyb561d1
Atxn7l2
Clec12a
Slc6a7
Pkm
Ythdf2
Lag3
Prdx2
Junb
Daxx
Zbtb22
Tapbp
Smim40
Fbxl20
Hnrnpr
Slc22a18
Cdkn1c
Cst3
Kbtbd3
Aasdhppt
Zfp600
Igf2bp3
Oga
Mycl
Tarbp2
Map3k12
Baz1b
Csad
Zfp740
Tmem38b
Hvcn1
Slc38a8
Fam71e2
Il11
Tmem190
Marchf6
Cars2
Zfp1
Ube2i
Kat6b
Rb1cc1
Trh
Uspl1
Khdrbs1
Pabpc1
Pcnp
Trmt10c
Pdgfc
Zfp988
Cbx5
Jund
Iqcn
Cfap70
Tbck
Aimp1
Slc3a2
Lin28a
Aftph
Abcb7
Crem
N4bp2l2
Pds5b
Mob1b
Desi2
Rabep2
Kat6a
Zbtb26
Rabgap1
Ms4a4d
Ppard
Dut
Bcar1
Dnah8
Mzf1
Ccdc85c
Esyt2
Kcnn1
Ccdc124
Ppp1r13b
Ap1g1
Srek1
Lasp1
Nt5m
Cops3
Pip4p2
Rasl2-9
Ccar2
9930012K11Rik
Coro2b
Rfpl4
Apbb1
Gmfb
Cgrrf1
Tsc2
Nthl1
Slc9a3r2
Pla2g6
Actl6b
Mbd5
Orc4
H2-M5
2410137M14Rik
Smbd1
Mos
Tsku
Cep41
Hk1
Pycr1
Tmem250-ps
Myadml2
Nacc2
Tmem50a
Rsrp1
Syf2
Dnajb7
Wdr86
Tenm4
Mtss2
Atg10
Bcat2
Gpi1
Gabpa
Atp5j
Ak3
Jph3
Zfp62
Ssbp4
Lrrc25
Atxn2l
Sumo3
Ctsc
Slc25a5
Ift74
Ptma
Slc12a1
Tmsb10
Nrf1
Hmga1b
Hmga1
Tfrc
Ptbp1
Ssh2
Npas1
Nabp2
Slc39a5
Vipas39
Ahsa1
Cdk5r2
Efnb2
Kpna2
2010003K11Rik
Hspb6
U2af1l4
Psenen
Lin37
Igflr1
Hes5
Pank4
Etl4
Erdr1
Crip2
Dazl
Ncaph2
Lmf2
Med21
Tm7sf3
Calml4
Zc3h11a
Zbed6
Rnf5
Agpat1
Vps28
Slc39a4
Cpsf1
Mog
Kctd9
Cdca2
Septin7
Pdp2
Anxa2
Pnpla6
Tspan9
Tgif2
Tac4
Tal2
Rassf7
Lmntd2
Gnai2
Lyve1
Cltc
Tdpoz8
Rnf212b
Traf4
Hdgf
Mrpl24
Stk38l
Lhx4
Abhd2
1700094D03Rik
Ubap2l
4933434E20Rik
Castor2
Orai3
Setd1a
Tti1
Rprd1b
Zfp24
Nedd4
Ptms
Ccdc174
Ypel4
Malsu1
Sowahb
Pbx3
Pknox2
Phyhd1
Mllt10
Neo1
Itpk1
Pfkfb3
Pou5f1
Ckb
Cux2
Galnt16
Irf2bpl
Dync1i2
Syn1
Tatdn2
Gpr19
Cldn10
Rsc1a1
Prkar1b
Dnaaf5
Tlk2
Mpdu1
Eif4a1
Ubxn2a
Atad2b
Hnrnpl
Vsir
Zfp534
Cdc14b
Zfp987
Gm3448
Gm3417
9030025P20Rik
Tcte3
Gm3435
Cdkn2b
Olfr1371
Slc4a10
Tnfrsf12a
Cldn6
Thoc6
Hcfc1r1
Mmp9
Foxj2
Efemp1
Plekhb1
Setd5
Prr14l
Depdc5
Lcor
Sash1
Mtmr12
Rgl3
Slc22a8
Gcsh
Kdm5b
Alg14
M6pr
Rere
Rmi1
Hnrnpk
Topors
Smim27
Aak1
Tnik
Timeless
Apon
Fut7
Abca2
Bclaf1
Tmem106b
Dmkn
Dyrk1a
Slc35b2
Hsp90ab1
E2f8
Ppm1a
Ptpn6
Grcc10
Enkd1
4933405L10Rik
Unc119
Asxl1
Hspa8
Ppef2
Kncn
Galk2
Cops2
Glrx5
Ino80c
Nsmce4a
Stk3
Ankrd39
Sema4c
1700037H04Rik
Epb41
Mex3a
Rab25
Tnrc6c
Zfp980
Psmc2
Dnajc2
Dnmt3b
Nr2f6
Llgl1
Pcdhgb8
Pcdhga12
Sptan1
Smug1
Cyb5r4
Grn
Ripply2
Hoxc12
Rbmxl1
Slc10a7
Cbx7
Gas1
Hsd3b4
Gm4450
Dhx9
Ephb4
Inpp5f
Tcea3
Setdb1
Ube2l3
Rimbp3
Nanog
Dipk1a
Nol3
Hsf4
Sez6
Fhod3
Src
Def8
Stip1
Laptm4a
Vmp1
Ptrh2
Pfkl
Prorp
Ptp4a2
Ksr2
Ing1
Mid1ip1
Fyco1
Patz1
Hspa9
Ypel3
Tbx6
Opn5
Phax
Aldh7a1
Mif
Ube4b
Nrep
Cep350
Ube3b
Kctd10
Rab1a
Nckap5l
Wwc2
Ermard
Dctd
Clpsl2
Clps
Psd4
Lax1
Tbc1d13
Zer1
Fam120c
Gm527
Rdh8
Col5a3
Nt5c2
Ina
Samd10
Prpf6
Zfp512b
Cacnb3
Dusp22
Csrnp1
Tbkbp1
Flvcr2
Epha2
Rell2
Hdac3
Btg1c
Mrps23
Ttc5
Tfpi
Ms4a10
Bhlhe41
Kank1
Mapk4
Tmem9
Fbxo47
Ajuba
Clic4
Ddx58
Mdm4
Tvp23a
Rab40c
Trim25
Fzd7
N4bp3
Qrich2
Eci2
Dag1
Dmbx1
Ints6
Osgin1
Necab2
Ythdf3
Erf
Gga2
Klf16
Twnk
Lzts2
Tnnt1
Tnni3
Mnt
Rnf19b
Vdac1
Peak1
Hmg20a
Stk24
Itpkb
Igip
Zfp687
Msantd3
Synpo
Dgkh
Nup50
H2-DMa
Brd2
Rbpj
Rbm38
Snap47
Jmjd4
Zfhx3
Mtmr3
Pnrc1
Usp13
Rad23b
Ctdsp2
Ncdn
AU040320
Tfap2e
Rsbn1
Rtbdn
Mast1
Cluh
Hp1bp3
En2
Tubb2a
Asic1
Hes1
Zfp628
Nat14
Itpka
Gm36210
Rev3l
Mrpl10
Lrrc46
Osbpl7
Upf2
Dhtkd1
Cbfa2t2
Abhd14a
Kdm3a
Trim65
Gm19345
Trps1
Trip10
Gpr108
Susd3
Slc9a7
C2cd2l
Dpagt1
Hic2
Fam163b
Chpf2
Abcf2
Slc23a4
Mknk2
Grhl3
Tet3
Cabyr
9530068E07Rik
Smarcd3
Piwil1
Inppl1
Folr2
Tfdp2
Hmgb1
Ankrd40
Ago1
Braf
Bahcc1
Urm1
Slc25a53
Rnf24
Zfp946
Matr3
Akap13
Limk2
Hnrnpdl
Enoph1
Rhov
Duxbl3
Duxbl2
Duxbl1
Hmga2
Gpat3
Tnnc2
Gsk3b
Ube2c
Snap91
Ftl1
Bax
Mybl2
Fbxo15
Ranbp6
9930021J03Rik
Man1a2
Gnb3
Slc26a1
Cdca3
Egln2
Ap3m2
Dynll2
Itm2b
Pdlim2
Isoc2a
Espnl
6820408C15Rik
Zcchc3
Mad2l2
Fbxo44
Fbxo6
Bcorl1
Pura
Ptprs
Hps5
Gtf2h1
Gjc1
Usp49
Dse
Gm10681
Prrg2
Nosip
Zfp3
Prr12
Arap3
Stat1
Tcf7l1
Plekha1
Xpo1
Cplx3
Cpsf6
Usp47
Tril
Arid3b
Sync
Sp1
Ptpn9
Krtcap3
Olfml3
Ddx42
Ccdc47
Rbbp6
Birc6
Syt2
Map3k2
Ccnd3
Ccdc171
St7
Ggact
Myh7
Ppp2ca
Tgfbr3l
Slc37a2
Map2k7
Unc13b
Tjp2
Prph
Fbxw21
Arhgef12
Etv5
Zfp981
Zbtb32
Kmt2b
Nbn
Cfap300
Nup62
Il4i1b
Atf5
Setd1b
Rhof
Plec
Parp10
Grina
Fads1
Rusc2
Hdlbp
Septin2
Pcdhgc4
Pcdhgc3
Pcdhgc5
Scg3
Exoc3l
E2f4
4931428F04Rik
Tob1
Sox12
Ercc2
Vamp8
Gdap1l1
Gm9573
Rcan3
Slc25a3
Kcnk9
Sirpa
Slc44a2
Zfat
Art5
Art1
Eef1akmt1
Olfr93
Nf2
Ndufab1
Fgfr1
Rnf214
Pcsk7
Zfp788
Usp46
Dpf3
Pafah1b2
Phf7
Bap1
Utf1
Sumo2
Insm1
H3f3a
Tnrc6a
Srsf10
Ninj2
U2af2
Ccdc106
Ripor2
Zfp580
Pfkm
Rlim
Anp32b
Adgrv1
Msrb2
Rnd3
Rcn2
Zfp212
Rfx2
Ccdc30
Zmynd12
Ppcs
Zfp704
Ulbp1
Sntb2
Slc16a9
Raver1
Vmn2r23
Zc3h12a
Lama5
Pde8a
Atad5
Crlf3
Dio3
Znhit2
Mrpl49
Fau
Tm7sf2
Havcr1
Vav2
Cdc25c
Fam53c
Pcbp2
Gnao1
Apoc1
Apoe
Setd2
Mettl27
Tbl1x
Cldn4
U2surp
Lrp2bp
Ier2
Terf2
Coro1c
Rps8
Yeats4
Gpr21
Tbl1xr1
Col6a2
Bmp10
Phyh
Gpa33
Dusp27
Samm50
Zbtb11
Rpl24
Irf1
Tbx18
Skp2
Lmbrd2
Memo1
Ubl3
Sh3glb1
Polg2
Ddx5
Cep95
Nek6
Trim71
Prnd
Casp8ap2
Tle6
Kcnj12
Bnip1
Abca1
Ube2o
Phgr1
Ccdc9b
Bmerb1
Slc34a3
Rnf224
Tubb4b
Fam166a
Tmco4
Slc36a3
Slc25a19
Tgfbr3
Osbpl1a
Tdpoz4
Esyt1
Zfp467
Sspo
Plxnb2
Mrtfa
Prtg