ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5576459 | E8.5 embryos
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◣ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Txndc11
Nfat5
Tcstv3
Brox
Aida
Hnrnpa0
Nfyb
Kat6a
Ctnna1
Cldn34d
Zfp341
Pxmp4
E030030I06Rik
Hsp90aa1
Stat3
Vangl2
Sspn
Stat1
Hspe1
Hspd1
Syp
Tlx2
Pcgf1
Mob4
Prr14l
Depdc5
Pfdn4
Cyp24a1
Il31ra
Nkx2-6
Slc35b2
Hsp90ab1
Alx3
Dmbx1
Abca3
Abca17
Cd209a
Gpr84
Fabp4
Ski
Slc14a2
Smc2
Pou3f1
Ssbp2
Dnajb7
Xpnpep3
St13
Arl4d
Pdgfrb
Cdx1
Skor2
Tbc1d14
Amotl2
Kif2c
Fbxw4
Slc32a1
Slc35e2
Greb1
Lyl1
Kpna1
Six2
Ttc28
Sim2
BC107364
Tal1
Gtf3c6
Dlx1
Hmx3
Hmx2
H3c6
H2bc8
H2ac8
H1f3
Prepl
Camkmt
Hsph1
Kifc1
Tex14
Gm4312
Gm4307
Gm4305
Gm4303
Gm4302
Gm4301
Zbtb4
Slc35g3
Polr2a
Tmem125
Hspa8
Fam90a1b
Apoo
Kifc5b
Egr1
Taf12
Gmeb1
Ssbp3
Eapp
Mafa
Six3
Prdm14
Zcwpw2
Azi2
Uspl1
Pitx1
Foxe1
Tmem107
Asmt
Abhd6
Foxd4
Otx1
Acot7
Bub3
Runx3
St3gal4
Nr5a1
Cerk
Raet1e
Raet1a
Pde10a
Tbx2
Tfap2c
Ubc
Ubb
Fam53c
Cdc25c
Sirt4
Vax1
Lhx6
H3c15
H3c14
H2ac19
H2ac18
Serpinh1
Alx1
Tlx1
Taf4
Hdac2
Gad1
Foxi3
Dnaja1
Pradc1
Cct7
Treml4
Setx
Lhx2
Prdm16
Mecom
H2bc6
H1f4
Fcgr3
Evx1
Sim1
Gm4981
Dux
Hoxc10
Irx3
Hoxc11
Fus
Ubfd1
Ears2
Calm1
Hspa1b
Sox9
Pura
Hnrnpa2b1
Cbx3
Fermt1
Mnd1
Dlx4
Csrnp2
Zfp536
Isl2
Hoxb3
Stap2
Mpnd
Hoxb2
Gtf2a1
Actb
Tfrc
Barhl1
Nabp1
Polk
Cert1
Prkra
Pjvk
Rnaset2b
Rnaset2a
Hoxb8
Hoxb7
Hoxb6
Tlx3
Flt1
Id4
Aldh1a2
Shisa3
Stip1
Pik3r2
Barx1
Hoxd3
Hoxd8
Slc41a3
Mettl1
Eef1akmt3
Cyp27b1
Tma7-ps
Ccdc134
Tmem18
Etfrf1
Casc1
Foxl2
Dnajb1
Vax2
Rita1
Ddx54
Rnf220
Napepld
Ube2b
Cdkl3
Zfp523
Tmem50a
Syf2
Rsrp1
Ppig
Ttc39d
Srsf7
Magohb
Plau
Pcif1
Osr2
Zpbp2
Ifnz
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13277
Gm13276
Gm13272
Ikzf3
H4c2
H4c1
H3c2
H3c1
H2ac4
H3c3
H2bc3
Srsf3
Rax
Hnf1b
Dnajb9
Zc3hav1l
Aasdh
Poldip3
Chordc1
H4c14
H3c13
H2bc18
Stag1
Ccdc194
Vipas39
Pdgfra
Cct8
Ahsa1
Ncl
Scd4
Commd1
Cct4
Guf1
Zfp959
Wt1
Vsx2
Tspan13
Lbx1
G3bp1
Atox1
Hmgn2
H2bc4
H2ac6
Alx4
Ntn1
Zfp146
Jtb
Eef2
Dapk3
Nkx2-4
Ssu72
Tti2
Pts
Extl3
Hmx1
Tubgcp6
Hdac10
Osbpl9
Sphk2
Spaca4
Rpl18
Fam83e
Satb2
Hddc2
AW549877
Eif4g3
C1ql1
Samd10
Prpf6
Zfp512b
Adk
Ap3m1
Prdx1
Tmem163
Tbx5
Ralyl
Btbd6
Dhh
Zfp568
Pax5
Hoxc12
Gbe1
Fkbp4
Bmpr1a
Tubb2b
Ccdc117
2410002F23Rik
Paip2b
Cyp2d34
Pctp
Ube2q1
Chrnb2
Aars2
Phf6
Dnajb12
H4c11
Zfp873
Rpl22l1
Nr2e1
Mrpl2
Klc4
Cul7
Hoxc6
Hoxc5
Rrp1
Pnpla8
H4f16
H2aj
Trim27
Gm10499
Trim39
Mylip
Btbd9
Ndufs1
Eef1b2
Xrn2
Selenot
Onecut2
Gsx2
Emx1
Slc25a29
Mafb
Foxf1
Tdrp
Itgb1
Sgf29
Anks1b
Aunip
Zdhhc3
Wdr4
Thumpd1
Tfap2e
Pxt1
Plod2
Ndufv3
Klf14
Kctd20
Hmgb2
Exosc7
Sp6
Slc25a38
Prdm13
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Gdf7
Eomes
H3c11
H2bc22
H2ac22
H1f5
Ero1a
Odc1
Kctd9
Cdca2
Snrnp70
Pax7
Dnm2
Ciart
BC028528
Rdm1
H60b
Cenpv
Slc9a1
Slc30a3
Mvk
Mmab
Jund
Iqcn
Ahsa2
Deaf1
Tmem80
Speer4f1
Ubxn7
Ier5l
Carmil1
Unk
H3f3b
Nup153
Txn1
Ncaph
Itpripl1
Hpse2
Cul5
Acin1
1700123O20Rik
Olfr890
Tsc22d1
Tmem70
Eloc
Utp15
Ankra2
Stmn1
Stag3
Gpc2
Gal3st4
Gpam
Nup133
Dennd6a
Prox1
Mto1
Dlx3
Cpe
Cgas
Vcpkmt
Gorasp2
Asxl1
Mtx3
Cbr3
H2bc14
H1f2
H4c18
H4bc24
H2bc23
H2ac24
H2ac23
Mcph1
H3c10
H2bc13
H2ac13
Hand1
Yap1
Fam174c
Cirbp
Shc3
Map2k2
Ebf1
Creb3l3
Cfl1
Caprin1
Seh1l
Dusp1
Specc1
Otp
Pcnp
Trmt10c
Tbx4
Rps20
Rps19bp1
Mthfsd
Foxl1
Foxc2
Atf4
Sfi1
Eif4enif1
H4c4
H3c4
H2bc7
H2ac7
Oaz1
Rxylt1
Gnal
2700062C07Rik
Umps
Plcg1
Elavl2
Ankrd60
Rbm47
Crot
Tmed3
Tiparp
Hnrnpab
Dars
Teddm1a
Idh3b
Glul
Foxc1
Hoxa13
Hoxa11
9130401M01Rik
Khdrbs1
Mfsd14a
Pigz
Ccdc62
Asph
Mllt3
Secisbp2
Cks2
Trim2
Nhlh2
Tmem30b
Npy
Nefl
Myl4
Cdc27
Phox2b
Gm3739
Lmx1b
Ebf2
Dmrt1
Haus4
Zfp24
Cck
Spata24
Wbp4
Elf1
Mzb1
Prob1
Esrrb
Eif4b
Hmbs
H2ax
Dpagt1
Ywhaq
Nfyc
Rae1
Mta2
Txnrd3
Pax2
Nkx3-2
Spata13
Polg2
Ddx5
Cep95
Akap8
Prex2
Olig2
Nkx6-1
Mios
Ddx59
Maff
Gabpb1
Hoxa7
Hoxa9
Rft1
Cers2
Anxa9
Zfp800
Ppwd1
Cenpk
Hoxa10
Zglp1
Tmem131l
Prpf19
Nipa2
En1
Dennd6b
Rasgrf1
Fbxo46
Bhmg1
Mtf2
Ubqln1
Cacnb4
Bcl6
Kbtbd6
Cwc22
Zfand2a
Sidt1
Prdm6
Mrps28
Rabep2
Nufip2
Cbln1
Maml3
Ppdpf
Gjb2
Esyt2
Wac
Zic4
Srrd
Hps4
Flywch1
Cnpy1
Bves
Zfp518b
Onecut3
Ikzf1
Arpp21
Dmrt3
Acan
Irx5
Rrp1b
Hsf2bp
Irx2
Tmem39b
Tdp2
Rps3a1
Acot13
Wtap
Pou6f1
Sox14
Usp40
Rbm6
Nt5c3
4930453N24Rik
Ptgfrn
H2-Ab1
Fgf5
Atp6v0c
Stard6
Amdhd2
4930503L19Rik
Rap2a
Tmtc1
Gmnn
Rpl23
1700001P01Rik
Ebf3
Zfp513
Snx17
Eif2b4
Tbr1
Edn1
Hsf1
Grin2b
Bop1
Rbmxl2
Larp4
Wnt1
Tfap2b
Rcor1
Hikeshi
Gata5
Fgf15
Irx1
Tbc1d5
Pax1
Senp8
Myo9a
Slc16a14
Spata18
Sgcb
Pacsin1
Acvr1b
Kmt2a
Peli3
Cldn7
Olfr433
Ifi205
Hoxb4
Tanc1
Lss
Zc3h11a
Zbed6
Mfap1b
Trem1
Bex3
Themis3
Mrpl23
Sema6a
Ubl4b
Cxcl12
Kdm5a
Ccdc77
Hoxd4
Ppp1r7
Pask
Fsbp
Ddah1
Tfip11
Gm1673
Tmem231
Gabarapl2
Ankrd37
Sp4
Prxl2a
6430548M08Rik
Ndfip2
Lrrc18
Atp1a2
Sync
Plet1
Slc44a3
Map3k20
Pgam2
Tmem114
Prss50
Prss46
Trio
Nat8l
Gm13271
Morc4
Stard10
Atg16l2
Lhfpl5
Lpp
Cystm1
1700029F12Rik
Gabarapl1
Cdrt4
Smim3
Cflar
Arid5a
Cipc
Gtf2ird2
Zmpste24
Tmco2
Surf6
Slc46a1
Ugt1a1
Mroh2a
Lmo4
Fndc7
Cebpa
Unc80
Ubr3
Olfr535
Serpinb1a
Ncoa5
Urgcp
Vgll1
Bglap2
Bglap
Aspa
Saa4
Saa3
Fzd10
Smim8
Prcc
Cd46
Zfp7
Zfp251
Olfr263
Lpar6
Olfr1252
Hexb
Ms4a1
Hltf
Slc25a17
Rin3
Olfr1412
Olfr1411
Ddi2
Oas1g
B3gnt7
Ppp2r3d
Celf1
Zcchc2
Stambp
Olfr1368
Hoxc4
Scara5
Ido1
Sox5
Aqp7
Slc25a20
Arih2
Trmt6
Mcm8
Etfbkmt
Lax1
Otud4
Zfp446
BC048403
Stfa1
Arhgap32
Tlr3
Dut
Wdr72
Gm3604
Wdr91
Stra8
Ccdc89
Bard1
Zfp382
Thbs1
Bmp8b
Gm34653
Fbxw2
Slc22a29
Mb
Mettl27
Hpd
Wwp2
Rnase2b
Olfr826
Tom1
Hmgxb4
Plekha3
Fkbp7
Olfr806
Scgb1a1
Rnf165
Lin28a
Bcat1
Ctsf
Depdc1a
Plekha7
Ube2h
Cltc
0610010F05Rik
Wnt6
F11r
Pomp
Paip1
Nwd2
Ets1
Eif2d
Dyrk3
Slc35f5
Fhl2
Enc1
Gpr161
Thrap3
Inpp1
Fem1al
Erfl
Mtmr3
Agpat4
Stra6l
Olfr648
Reep3
Lin52
Aldh6a1
4930486L24Rik
Cited2
Defa6
Defa24
Vcpip1
Pkdcc
Hes1
Rsph3a
Serpinb9e
Cd300e
Frrs1
Epha1
Fbxo21
Hoxa6
Garnl3
Rnf214
Pcsk7
Klhl22
Ptpn18
Zfp1
Slc39a2
Armc12
Gas7
Eif2s2
Aqp9
Tor3a
Fabp12
Slc14a1
Zkscan17
Slc5a11
Gm13212
Glra4
Drd3
Gramd1a
Olfr414
Mfge8
Tbce
Rdh7
Kifc3
Uaca
Olfr1229
Spatc1
Hoxa4
Cdca7
Gm7244
Ppef2
9430069I07Rik
Dennd1b
Ly6i
Defb11
Zbtb10
Abca8b
Rnf157
Arsa
Plcd1
Flacc1
Aplp1
Gstm2
Gm5622
C7
Wwox
Spred2
Drc7
Pramel30
Zfp996
Cyp2d12
Rab32
Ifi209
Tceal9
Slc30a1
Mrgbp
Grhl3
Apol10a
Usp6nl
Rsph3b
Klf9
Ankrd1
Tceal3
Olfr960
Septin1
Ccdc171
Zfp111
Naglu
Pbp2
Gsg1
Tango6
Tor1a
Exoc5
Ap5m1
Zfp820
Hoxd9
Hoxd10
Adar
Snrpn
Hat1
Gm525
Smad5
Gm29802
Gm10100
Fhit
Gm1070
Ccm2
Ncf2
Adamts7
Zfp553
Lrfn2
Uba5
Acad11
Mrvi1
Olfr725
Phc2
Mbnl2
Gm14444
Usp20
BC005624
Cldn3
Vwf
Rtp2
Olfr1396
Amer3
Zfp449
Myh9
Il17rd
Sod3
Sos2
Rffl
Apobec3
Utp25
Zer1
Tbc1d13
Ly6a
Avl9
1700123K08Rik
Slc44a4
Aadacl2fm1
Rp2
Rps6ka2
Pramel31
Smarcad1
Smap1
Tmsb10
Gm6551
Zfp984
Ceacam2
Glo1
Dnah8
Cdk18
Prl6a1
Kcng2
Oasl1
Rpgrip1
Hnrnpc
Cd300a
Zfp280c
Igsf3
Hoxb9
Gip
Dguok