ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Hoxd9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◣ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Prdm13
Hoxc6
Hoxc5
F11r
Hoxa4
Map4k5
Atl1
Gpr84
Slc37a3
Rab19
Notch1
Ubl4b
Pcnx3
Map3k11
Ngdn
Synpo
Alb
Atp1b4
Speer4a
Pkdcc
C1ql3
Hoxb4
Hoxb3
Hoxd8
Hoxd4
Hoxd3
Riox2
Efnb2
Zfp503
Zc2hc1c
Maml2
Rnf165
Zfp473
Vrk3
Sptssa
Hoxc4
Tmem268
Atp6v1g1
Hoxb6
Hoxb5
Ccdc182
Rbp2
Hdx
Rbm25
Pomc
Cxxc4
Ffar4
Arfgef1
Otp
Gm973
Acsf2
Mmrn1
Elf5
Hoxa2
Hoxa1
Hoxc8
Sv2b
Hoxb7
Csrp3
Nkx2-2
Crb1
Lpgat1
Icmt
Hes3
Grap2
Nkx6-1
Arhgap28
Hoxa6
Hoxa5
Hoxa3
Ifrd1
Dpyd
Meox1
Gm527
Kif13b
Gcnt2
Hoxa7
Zadh2
Tshz1
Rab30
H4c11
H2bc14
Slc5a12
Ttc30a1
Baalc
Calcrl
Dhx8
St3gal2
Trim59
Itgb8
Csrnp3
Ttc39b
Dph5
Rarb
Prkar2b
Gtf2h4
Khdc4
Prickle1
Mbnl1
Kank1
Mab21l2
Gpatch2l
Clasp2
Irx1
Sqor
Gpc6
Skap2
Scn1a
Slc9b2
Gnat3
Crlf2
Myo1d
Olfm2
Dll1
Trio
Ociad2
Tcstv3
Tox3
Alox5ap
Sox21
Neurod4
Tlk1
Ece1
Thumpd3
Mllt3
Wt1
Prkar2a
Cbfb
Cox7a2l
Ccdc136
Tjp2
Acyp1
Cacnb2
Rab27a
Epha5
Osbpl9
Tshz3
Psd3
Crkl
Olfr71
Ncoa7
Ptprd
Psmd12
Pitpnc1
Ttll11
Srpx
Bahcc1
Dtx4
Foxf2
Tbc1d22a
Crp
Kmt5c
Cpsf1
Foxp2
Myo10
Dap3
Cux1
Ccdc174
Slc31a2
Oxnad1
Dph3
Tmem156
St8sia2
Apcs
Nkx2-9
Iqca
Foxn3
Phox2b
Rara
Map4
Pdlim5
Zfp703
Elmo2
Cemip2
Plcd3
Galnt14
Acbd4
Mecom
Nrg1
Hhip
Hsdl2
Plxnc1
Dmrt3
Ccnd1
Stox2
Wdr7
Ccn1
Gfra3
Vta1
Cubn
Iigp1
Zfp330
Gm4737
Ascl1
Hipk3
Pex5l
Olfr646
Olfr572
Olfr571
Btg2
Vamp9
Dnajb13
Cmtr1
Rtn4rl1
Egr2
Mdm2
Gm4791
E4f1
Pold3
Prdm6
Hoxb8
Hand1
Dnm2
Dst
Rnf220
Iglon5
Fbxo28
Tmem97
Cdca8
9930104L06Rik
Cep128
Rpgrip1
Rhbg
Adipor2
Copz1
Tnfsf13b
Sumf1
Trib2
Rtl1
Stxbp6
Lpp
Ntn1
Gask1b
Lysmd3
Zfp423
Tnrc18
Lyrm9
Wdr18
Zfp945
Susd1
Kbtbd13
Glrp1
Mad2l2
Draxin
Lemd2
Smim8
Smug1
Efcab5
Th
Got2
Olfr298
Itch
Col4a2
Col4a1
Higd1c
Poc5
Pcnx
Phc2
Adtrp
0610009B22Rik
Rhcg
Meis2
Gprc5d
Acot1
9430069I07Rik
Aff3
Cited4
Oacyl
Vapb
Fam174a
Actn4
Phgdh
Sgpp1
Ermn
Rabl2
Atg4c
Ccdc33
1700010B08Rik
Galk2
Cops2
Skida1
Mllt10
Fam181a
Pdia5
C330018D20Rik
Ebf1
Foxp1
Zfp143
Tob1
Phactr3
St8sia4
Lmbr1
Ip6k3
Rnase12
Rnase11
Gucy1b2
Cfap58
Clmn
Galr3
Fyn
Rps10
Nacc2
Mycl
Tmigd1
Ivd
Eif2s3x
Tti2
Nap1l1
Slc9a9
Cxcl12
Gm18905
Gm15517
Acp4
Kdm8
Hnrnpa1l2-ps2
Toe1
Mutyh
Hpdl
Sox6
Kifc3
Fzd8
Aktip
Zfand3
Cradd
Skil
Dach2
Tbc1d10b
Septin1
Mylpf
Srgap3
Slc7a1
Lrrtm2
Fbxo16
Krt9
Tox2
Plpp6
4430402I18Rik
Scube2
Tspan14
Smg9
Smad1
Kcnip1
G2e3
Pth1r
Lta4h
Dach1
Poglut3
Phpt1
Mamdc4
Ajm1
Map1b
Cyp19a1
Slc44a3
Radil
Bend4
Sall4
Nol4l
Cntnap2
Nudt1
Mrm2
H4c8
H3c8
H2ac10
Pax8
Ric8b
Ppp2r5b
Cryzl2
Atg2a
Mthfd2
Mob1a
Fbxw7
Etv6
Adgrv1
Krt222
N4bp2l1
Tmem53
Tubb6
Ppp1ccb
Rps23
Megf10
Grem2
Meis3
Iffo2
App
Men1
Map4k2
Cnr1
Etv3
Zc3h12c
Ndnf
Chst12
Ttr
Tmem255a
Fmo2
Hnrnpl
Ech1
Erdr1
Tom1l2
Pum1
Drc3
Lin28a
Tmem132b
Hhat
Fgd3
Fgl2
Best3
Wnk1
Vmn1r53
Asic4
Dynll1
Ppp1r9a
Kcnk4
Gpr137
Esrra
Catsperz
Ttc1
Tcerg1
Thrb
Drd2
Rabep2
Tle3
Mbp
Rragd
Prmt3
Cldn34d
Pik3r4
Palld
Pla2g2d
Bmp7
Scarb2
Dip2b
Zc4h2
Ncam1
Ss18l2
Sec22c
Nktr
Med25
Fuz
5730409E04Rik
Chchd5
Lrrn3
Sf3a2
Plekhj1
Amh
Tpm3
Ror2
Hibadh
C1qtnf4
Vmn2r23
Cit
D6Ertd527e
Tmem260
P4ha3
Dock3
Tmem167b
Mfsd9
Cyp2s1
Mpv17l
Cd83
Cbfa2t3
Txndc11
Spata7
Kif2c
BC051142
Tcim
Flrt1
Atrn
Lck
Trim23
Trappc13
Shld3
Upk3bl
Tle4
Cda
Lrfn2
Prtg
Celf3
Cachd1
H6pd
Pou3f3
Col6a4
Smarcal1
Zfp41
Tnks2
Ajuba
Lrg1
Ppp2r2a
Mrpl33
Evi5l
Slc25a42
Thsd4
Sema6b
Fmc1
Dusp5
Bbs2
Scrn1
Ivl
Slc6a1
Nup107
Cnot3
Slc4a8
Ripor2
Ppp3ca
Chrna4
St6galnac1
Lrrcc1
Ift46
Ccdc171
Arcn1
Akap6
Emcn
Mapk9
Asf1b
Ubqln2
Spen
Ing3
Gm38499
Caml
Slc27a4
Epb42
Pacrgl
Pgm2
Man1a2
Cyren
Setd4
Cbr1
Psmg2
Cep76
Purb
Slc5a6
Cad
Atraid
Hpf1
Uncx
Lin28b
Rab18
Pdxdc1
Tnfaip8l2
Sirt4
Mfng
Inka2
Ddx20
Zdhhc2
Utp4
Snca
Rhob
Derpc
Chtf8
Pabpc4l
Cpa5
Atp5g2
Fam78b
Arpp21
Cbx2
Tatdn2
Kbtbd8
Vps29
Rad9b
Muc6
Bzw1
BC107364
Dennd5a
Spp2
Asxl3
Xpr1
Dad1
Abhd4
Ptger2
H4c2
H4c1
H3c2
H3c1
H2ac4
H1f1
Dbx2
Prkd3
Garre1
Vps41
Esrrg
Pex2
Sp9
Lhfpl2
Tmem200b
Prrxl1
Mrpl23
Ubp1
Zfp628
Ssc5d
Nat14
Gm36210
Gja10
Casp8ap2
Vkorc1
Prss53
Bckdk
Tph2
Nsg2
Percc1
Mtcl1
Ccdc88c
Hivep2
Rptor
Scmh1
Gtf2a1
E130308A19Rik
Ccdc187
Zkscan1
Olfr1441
Nkx2-6
Dus1l
Lpar4
Wnt10a
Metrn
Fbxl16
Tjap1
Gm14092
Ppp1r15b
Rag2
Pik3r1
Iftap
Cnga4
Angpt4
Mnx1
Ell
Rora
Marveld3
Cntf
Lipo4
Aven
Map6
Rnf44
Foxn4
Gfod1
Spock2
Ccdc154
Nme6
Epsti1
Josd1
Gtpbp1
Gbx2
Ifna9
Nr3c2
Wfdc6a
Tceal7
Pias4
Eppin
Mrps36
Gucy1a1
Egln2
Cyp2t4
Ccbe1
Asap1
Nr4a2
Lpo
Kansl1l
Pigm
Stk33
Mapre1
Agfg1
Mrps33
Mpl
Osbp
Pyroxd1
Hes1
Add2
Tubg2
Plekhh3
Tbc1d9
Ythdf3
D630045J12Rik
Cnn2
Abca7
Sos1
1700122O11Rik
Mafb
Glp1r
Lhpp
Gm21698
Gm21680
Zfpm1
Postn
Nipsnap1
Atic
Gse1
Grpel2
Enpp3
Tub
Pakap
Emp3
Ccdc114
Fzd3
Znrf4
Slc22a1
Mybpc1
Ncoa5
Slc22a22
Mgat5
Lrrc4
Aqp8
Adcy2
Zswim5
Mfsd10
Rps26
Zfp775
Xaf1
Repin1
Gm5111
Gpn3
Fam216a
Adora2a
Rprml
Lyzl6
Sertad4
Pfas
Ctc1
Tbl1x
Ndufc2
Alkbh5
Coq7
Capn8
Iqsec1
Pou3f2
Robo2
Ccdc60
Tex14
Lama5
Tshz2
Barhl1
Nebl
Tmem178b
Pkd2l1
Gcc1
Arf5
Evx1
Acvr1b
Wdr6
Sema6d
Jund
Iqcn
Dipk1a
Pik3r5
Elavl4
Dhx16
Rab28
Lrrfip1
Fbxw15
Traf1
Srpk2
Aebp1
Dalrd3
Zfp672
Sh3bp5l
Ormdl3
Lrrc3c
Gtf2ird2
Cd9
Nell2
Mvb12a
Bst2
Sh3bp5
Il3
Csf2
Mob3b
Ifnk
LTO1
Cdhr3
Srprb
Sh3pxd2a
Dpt
Abr
Manbal
Sc5d
Ksr1
Dip2c
Zfp608
Prdm10
Gm7244
Syt2
Hmox1
Bicd1
Kcnip2
Mtss2
Wdyhv1
Syne4
Sdhaf1
Atad2
Mcub
Pou1f1
Fam135b
Trpc7
Kif21a
C1qc
C1qb
Rgs5
Gab2
Dnajb2
A630095N17Rik
Primpol
Casp3
Nms
Hoxa9
Hoxa10
Ehbp1
Trrap
Tmem130
Ctif
Ttc41
Rab11fip5
Hsp90b1
Gga2
Wbp11
Smco3
Mia3
BC049715
Rusf1
Il5ra
Nedd9
Fgd4
Galnt9
Zfp689
Snap25
Cnot2
Slc25a25
Naif1
Gas1
Foxj2
Slc43a1
Arhgap8
Ctsf
Fer
Tgif1
Zdhhc16
Exosc1
Ankrd40
Ndufb4c
4930550C14Rik
Ankrd6
Nrxn1
Dbx1
Slc38a2
Olfml1
Hapln1
Eef1akmt1
Crmp1
Rrp15
Myl7
Vdac2
Ogfod3
Mrfap1
Hexdc
Sox1
Plaa
Gm12657
Fbxw25
Dnajb5
Crybg3
Cacna2d1
Spred3
Narf
Gng2
Ggn
Epha8
Cybc1
Marchf10
Dcaf11
Rufy3
Nr0b1
Dhrs7b
Eif3c
Zfp593
Grrp1
Gm30191
Kmt5a
Nr2f1
Fgfrl1
Gm5544
Elavl2
Rack1
Cables1
Hpgd
H2bc6
H1f4
4933424G06Rik
Nop53
Schip1
Selenoi
Rbm5
Actr3b
Pou4f3
Hlcs
Rec114
P4htm
Nr2f2
Kbtbd6
Gpx2
Apela
Rtcb
Mpp7
Gphb5
Pbx1
Zfp334
Mup5
Nrp2
Nr4a3
Mki67
Casp7
Shh
Tdgf1
Sall1
Lrrc2
Gm14137
Gchfr
Gm21663
Supt6
Sdf2
Prkn
Bcap29
2810006K23Rik
Wnt1
Sgca
Ppp1r9b
Ddn
Dennd5b
Art3
Eps8
Olfr1385
Shisa3
Snrpc
Exoc5
Ap5m1
Hdhd2
B3galt1
Cacna1c
Ctbp2
4933402D24Rik
Fam222a
Urm1
Megf9
Nrcam
Btbd3
Slc2a10
Rprm
Qrfp
Erich6b
Cacng5
Cd96
Atp5l
Arg1
Uts2b
Stra6
Dcaf12
Ttc7b
Ret
Snx30
Ngef
Neu2
Mpp3
Ebf3
C2cd4a
Taf12
Gmeb1
Spag9
Gm3448
Gm3417
Eif4g2
Pnoc
Plekha6
Il20rb
Lypd10
Engase
Angptl7
Rnf169
Vamp1
Tcf4
Dyrk3
Rnf4
Adam12
Pdpn
Msh5
Clic1
Ciao3
Aqp6
Sox5
Shd
Scrt2
Manea
Fsd1
Slitrk6
Nol6
Crtam
Ccl26
Zc3h3
Srbd1
Lgi1
C2cd5
Ptprj
Rps29
Eci1
Tmem100
Bco1