ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416203 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◣ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Slc25a1
Tfrc
Phc2
Atp4a
Prss1
Lpar1
Gm5771
Rprm
Lrrn2
Fgfr3
Arhgap10
Zkscan1
Chrna9
Klhl5
Zfp33b
Nf2
Krt39
Fem1al
Tmcc1
Scn1a
Upp1
Serinc5
Rdx
Hoxa4
C2cd5
Arfgef1
Aven
Zfp64
Cped1
Greb1
Tcp11l1
Trim2
Herc2
Adk
Myh13
Akap9
Hoxc5
Xrn2
Ank2
Dnah5
Hoxb4
Zeb2
Map2k6
Mgat4c
Dact1
Zcrb1
Pphln1
Pdlim3
Slc39a14
Fam214a
Rbm12
Cpne1
Ostc
Rbm14
Gm21992
Mtss1
Hoxb8
Olfr126
Fhdc1
Abcg2
Med12
Slc25a36
Snrpn
Snurf
Dennd2c
Ifitm1
B3gat3
Nsg2
Gid8
Dido1
Foxd3
Pcdhgc4
Ndp
Rnf43
Zfp148
Cpsf4l
Arhgap12
Spock3
Gm7244
Krtap29-1
Stra6l
Mtmr7
Cdc42ep4
Erc2
Defb10
Hyi
Nid2
Wdr47
AB010352
Nr6a1
Hoxc4
Cdca7
Stk32b
Atf7ip2
Krtap3-3
Rassf1
Dusp4
Gm12789
Kif3c
Wdr49
Ankrd61
Etv1
Cdh20
Rif1
Tmco5
BC107364
Gjc1
Rrp36
Ccdc194
Xlr3b
Srbd1
Ptprz1
Hoxd3
Foxred2
Helt
Ero1a
Slc9a9
Smim11
Ifna4
Fzd10
Zmat5
Uqcr10
Cysltr1
H4c11
Lrrtm4
Katnal2
Usp53
Synm
Bod1l
Slc35f5
Tex26
Ccdc33
Acrbp
Sulf1
Sult6b2
Shisa2
Smoc2
Tle3
Txndc5
Fmo6
Prkcq
1700067K01Rik
Coq10a
Sdr42e1
Edem3
Inpp5k
Anxa11
Smc4
Ift80
Eya1
Ralbp1
Rbm28
Timm23
Parg
Zdhhc7
Fzd2
Tas2r135
Dnah8
Lsm11
Grpel1
Minar2
Tex55
Vamp9
Kcnip2
Gabra2
Dyrk3
Smndc1
Rpl34-ps1
Rpl34
Scd1
Gm14393
Hoxc6
Thtpa
Atxn7l1
Rps12
Srsf2
Mfsd11
Ttc23
Zfp580
Bclaf1
Ndst1
Pitrm1
Zfp663
Gcnt2
Olfr304
Lrguk
Cep112
Dgke
Trps1
Ppp1r15b
Srrm2
Chtop
Snph
Wdr45b
Dusp5
Prickle1
Mcub
Reep3
Slc46a3
Stat4
Gpr146
Tll1
Tmed6
Adgrg1
2410141K09Rik
Selenop
Rnase2b
Plac1
Cnr1
Mastl
Nus1
Supt6
Sdf2
Fgf15
Runx1t1
Defb11
Slc25a53
Meis2
Enpp2
Papss1
Plcxd1
S100g
Fbxl2
Krtap7-1
Wwp1
Ncald
Il17d
Tpd52l2
AI413582
Pde1a
Timm9
2700049A03Rik
Psd3
Pltp
Aktip
Agfg1
Ccdc60
Sesn1
Phc1
Vwa8
Ltbp1
Mapk6
Rfx4
Daxx
Taar9
Rbpj
Grm8
Olfr298
Nt5c
Zcchc13
Adam12
Thegl
Eif4e3
Lnpk
Ifit1bl2
Lpar4
Plin3
Esrrb
Sgcg
Wdr41
Taar2
Cfc1
Upf3b
Mapre3
Mmp15
Slc30a4
Slc25a17
Arhgef3
Zfp951
Fbxl3
Gnb1l
F2rl2
Entpd1
Pcbp2
Dis3l
Rhpn2
Per3
Mid1
Lars
Myo10
Aunip
Fmn1
Vrtn
Faah
Sil1
Peli1
Macroh2a1
Hesx1
Ajuba
Shc4
Apoo
Ndufs3
Kbtbd4
Uck2
Lrrn4
Defb6
Acp6
Sipa1l1
Susd6
Cpa2
Zfp87
Gapvd1
Ahctf1
Cep162
Nucks1
Zfand6
Dkk4
Fgd4
Prune2
Cdhr1
Uts2b
Sephs1
Slc25a24
Anxa2
Syncrip
Lysmd3
Degs1
Nsun6
Il10
Tti2
Slc44a3
Tbce
Olfr52
2410137M14Rik
Igsf1
Samhd1
Pla2g4a
Acta2
Fam169a
Emb
Smim13
Sec22b
Vwa5a
Dennd4a
Iigp1
Trak2
Ints14
Efs
Pgghg
H2bc14
Dst
Slc39a2
Kdm4a
Prss23
Lrrc8d
Tmem45b
Zscan10
Tmem92
Adamdec1
Gjb3
Mrps18c
Helq
Csn3
Tmem230
Epb41l3
Pbld2
Mtf2
Snx13
Clec12a
Defb39
Trip4
Csnk1g1
Tab2
Calcrl
Cyp2ab1
Pdpk1
Dag1
Rffl
4931417E11Rik
Zfp111
Grip1
Ccpg1os
Cnot2
Rit2
Zc3h12c
Ptprg
Pcm1
Tm9sf2
Frg1
Has3
Wipf1
Tox
Trp73
Knl1
Dhrs3
Odam
Med13l
Thbs2
Wdr6
Zfp182
Rimbp2
Dapk3
Lrpap1
Prl3d1
Cdkn2b
Unc13a
Elavl4
Kif3b
Casp9
Mttp
S100a3
Gm5148
Olfr1437
Mat2b
Slc26a5
Rgs12
Dhx32
Dusp23
Srrm4
Lefty1
Agmat
Atp8a1
Ccnl1
Rxrg
C6
Htr2c
Apold1
Ccdc6
Smap2
Htra4
St3gal2
Kcnip4
Sms
Kctd1
Tiparp
Scd2
Thra
Zfp219
H2bc3
Fam107a
Insyn2b
Trpm3
Iapp
Pth1r
Naa60
Radil
Lrrc4c
Borcs5
H2bc8
H2ac8
Npas4
Tcim
Gpn3
Fam216a
Gspt1
Mcf2
Fbxo5
Pmf1
Gm12248
Cnot8
Ankrd22
Ampd3
Msl3
Wwtr1
Frzb
Cgnl1
Hoxb1
Tdrd7
Alg8
Stk33
Trp53bp1
Nrarp
Mad1l1
Gmnc
Thap4
Zfp473
Vrk3
Sdc4
Mettl9
Phactr2
Mapre1
Casp8
Celf4
3300002I08Rik
Ehmt1
Mcidas
Alyref2
Sertad2
Cmc1
Pou2f1
Serpinb13
Slc35f2
Ing3
Foxo1
Relch
Cytip
Spg7
Hes6
Dusp6
Urgcp
Tex14
Zfp945
Arpp21
Selenov
Snx6
Wdr95
Bmpr1b
Pcnx4
Dapk1
Glipr1
Map1lc3b
Trim33
Mnd1
Ffar4
Cxcl9
Grid2
Sumf1
Smoc1
6330403K07Rik
Bdnf
Triml2
Pgk1
Ptpn6
Cmas
Tlr3
Itgb8
Sptb
Rasgef1a
Trim37
Ldlrad4
Timm8a1
Pls3
C130073F10Rik
Zfp931
Lxn
Creb5
Traf3ip2
B4galt3
Slx1b
Prdm8
Idh1
Pikfyve
Cyp4f17
Trp53bp2
Gtf3c6
Tph1
Tnrc6a
Etv3
Aox1
Vwde
Myadml2
Rbm41
D130040H23Rik
Nsmce3
Klhl32
Zfp946
Hdx
Atg10
Lrrc20
Nxph2
Pxk
Ccz1
Pcdhb16
Gm11565
Ercc5
Bnip3
Lpcat1
Zfp820
Prrxl1
BC049352
Gnat3
Skap2
Nin
Defb1
Olfr1037
Zmynd8
Tulp3
Rab7
Rsph4a
Slc6a12
Gjb6
Il18
Bco2
Ttc30a2
Slc16a13
Fam13c
Zfp329
Lrrtm3
Hoxb2
Mbtps1
Dsc2
Ptk2b
Actn4
Pcnx3
Map3k11
Trim29
Cep41
Gm17359
Kdm4c
Ogfod3
Hexdc
Lrriq4
Lrrc34
Phf21b
Gpx7
Gm14410
Kcnk13
Pan3
Zfp786
Dtna
Ccrl2
Arrdc3
Pde4b
Adap1
Gadd45g
Dnaja3
Gstcd
Hint1
Nell2
Ccng2
Zfp9
Zfp688
Ly6g6d
Nup107
Tbc1d15
Rab21
Pde10a
Scoc
Zfp870
Rcl1
Btla
Tmem100
Prdm16
Cd38
Tlk1
Sgpp1
A2m
Srp68
Shroom3
Olfm3
Dusp12
Zfp428
Krt222
Slc1a1
Mgat5
Cdc20b
Ywhaz
Senp2
Fam118a
Gbp9
Gm5165
Trim71
Trpv6
Anapc10
Abce1
Mrpl45
Rnf115
Polr3c
Reep5
Aph1b
Hoxc12
Defb26
Lin7a
Arfgap2
Gm29802
Pnrc1
Ubr7
Ppm1f
Epc1
Clasp2
Tm7sf2
Lrrc8b
Lrp10
Mllt10
Slc27a2
Trim3
Fign
Dtnbp1
Zfp608
Mycbp2
Cad
Ugt1a9
Cbfa2t2
Abcb4
Galnt5
Tbx18
Capn3
Bola3
Metap1
Maf
Mfsd4b4
Eif5
Vil1
Rbm25
Wdr1
Emx2
Rabl2
Rnf180
Sftpd
Susd2
Etaa1
Slc23a2
Sypl2
Trim7
Terf1
Tmem154
Rnf13
Astn1
Mybl1
Fam13b
Lrrc15
Rbm47
Plekha1
Tcerg1
Evl
Large1
Atrip
Dennd1b
1700016H13Rik
Psmc4
Csnk1a1
Cdhr3
Efhc2
Alkbh6
Gmip
Scn3a
Tfeb
Rnf220
Tmem274
Srgap3
Bcl7b
Zfp78
Tbca
Bcat1
Asb8
P4ha2
Vstm5
Tle4
Larp4
Sprr2a3
Tank
Arhgap24
Odc1
Fam76a
Chchd2
Sarnp
Ormdl2
Cenpv
Stra6
Nhsl1
Rnf4
Cer1
Gja1
Zfp54
Sc5d
Snx16
Cox7b
Cald1
Tafa3
Cep250
Dsc1
Slc12a4
Mctp2
Zswim1
Fut10
Sepsecs
Rps11
Zfp712
Cd160
Prxl2b
Itgb6
Hvcn1
Aqp6
Kcnj8
Gsap
Hacd4
Pgap6
Zfp62
Phf24
Rpl14
Zfp707
Serpina3i
Mocs3
Dpm1
Tbx22
Pdp1
Vamp1
Dync1i2
Elf2
Tmem181a
Sdk1
Calml4
Rcan1
Lox
Birc6
Adipor2
Kcnmb2
Schip1
Sprr2a2
Sprr2a1
Clic5
Ecpas
Tent2
Hes1
Trappc3
Smarca2
Tmem220
Tmem156
Jak1
Abca8b
Cd200r1
Gnpnat1
Trappc3l
Gm14326
Cfap53
Hook2
Xlr3c
Mmp27
Hbq1b
Dppa4
Flvcr1
C330018D20Rik
Liph
Tatdn2
Lbx2
Ubtd1
Mms19
Pou5f1
Pik3r1
Unk
C77080
Adgra2
Sugt1
Arhgap32
Zfp654
Mib2
Prox2
Srxn1
Msantd3
Pcdhgc3
Rerg
Gypa
Cxcl10
Ctbs
Car3
Phospho2
Ccdc173
Gcnt1
Fam111a
Cxcl11
Rhot2
Dipk1c
Calcb
Adamts12
Rxra
Il7
Gdpgp1
Cib1
Reln
Csrnp3
Mosmo
Arl15
Prdm13
Tshz3
Ncoa7
Dedd
Arhgef39
Slc30a5
A2ml1
Shroom2
Kcmf1
Tmx4
Abca12
Thap2
Sntb2
Mlip
Mast2
Olfr808
Lrrc19
Olfr1158
1700037H04Rik
Tent5d
2610002M06Rik
Rsbn1
Agpat4
Spag9
Sgk1
H2bc6
Slc28a3
Syk
Zc3hav1l
Zfp106
Fbxo40
Smim19
Slc20a2
Vps36
Prkacb
Hdac9
Mob3b
Ascl1
1700001P01Rik
Spryd4
Nrg1
Fkbp7
Tmem143
Nipal2
Dcn
Gpr137b
Myl3
Gm14325
Ubtd2
Arhgap42
B4galt1
Baz1a
Ctxn3
Uckl1
Abca4
Rara
Scg5
Rab43
Celf2
Ddx60
Txlnb
Per1
Mlh3
Dab1
Tpd52
Kmt5c
Usp20
BC005624
Cd300lg
Hand2
Lcmt1
Tmem11
Chaf1a
Taf5
Nsd1
Gm51425
Czib
Fyb2
Bid
Kbtbd12
Mrpl15
Sgo2a
Stard3
Rgs5
Lrrc23
Slc40a1
Nepn
Tbata
Nt5c3
Mta2
Opa1
Zfp385c
Dmkn
Dgkb
Terb2
Patl2
Chd7
Cdk15
Alcam
Zfp3
Nmd3
Cdh7
Phtf2
Crls1
Kmo
Rtkn2
Zmat1
Tmem98
Zdhhc21
Cdsn
Yjefn3
Bri3bp
1810010H24Rik
Vapa
Olfr222
Sptssa
Mtus1
Cd244a
Olfr898
Adam26a
Tom1l2
Drc3
Pfdn2
Tbc1d16
Ccdc40
Snx21
Klhl34
Med1
Bcar3
Nol4
Castor1
Zfp282
Tmem74
Mgat4a
Btbd7
Hoxd8
Oga
T2
Ngdn
Srpk2
Gchfr
Rps6ka2
Sgtb
Nln
Rapgef1
Mpp4
Marveld2
Cnpy1