ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416204 | Embryoid Bodies
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◣ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Cacna1c
Slc25a1
Atp4a
Phc2
Tfrc
Lpar1
Abca16
Fhdc1
Krtap3-3
Gm5771
Rai14
Scn1a
Serinc5
Zkscan1
Arhgap10
Tmcc1
Prss1
Fgfr3
Fem1al
Plcxd2
Arfgef1
Rprm
Nf2
Lrrn2
Rdx
Plin3
Krt39
Klhl5
Hoxa4
Cpsf4l
Greb1
Slc9a9
Mgat4c
Zfp33b
Hoxc5
Dennd2c
Acrbp
Smim11
C2cd5
Map2k6
Mtmr7
Hoxb4
Tcp11l1
Zfp580
Olfr126
Upp1
Zcrb1
Pphln1
Trim2
Ifitm1
Rnf43
Adk
Pdlim3
Herc2
Stra6l
Dact1
Hoxb8
Ankrd61
Erc2
Dnah5
Plac1
Defb10
Nr6a1
Tex55
Aven
Etv1
Med12
Coq10a
Gpr146
Mtss1
Rrp36
Hoxc4
Zfp64
Foxd3
Abcg2
Zeb2
Gm12789
B3gat3
Slc25a36
Krtap7-1
Minar2
Ptprz1
Synm
Rbm12
Cpne1
Nsg2
Wdr47
Tmco5
Mcub
Lrguk
Ank2
Ccdc33
Stk32b
Cdca7
AB010352
Eya1
Faah
Fzd10
Papss1
Defb11
Srbd1
Chrna9
Tex26
Snrpn
Snurf
Wdr49
Arhgap12
Tmem92
Pitrm1
Pcdhgc4
Slc39a14
Cdc42ep4
Smap2
BC107364
Rif1
Tle3
Lnpk
Syncrip
Ifna4
AI413582
Susd6
Cdh20
Ccdc194
Vamp9
Spock3
Gm7244
Meis3
Agmat
Meis2
Ero1a
Taar9
Esrrb
Mapre3
Defb26
Smc4
Ift80
Stox2
Hoxd3
Prkcq
1700067K01Rik
H4c11
Nid2
Helt
Thegl
Mmp15
Foxred2
Sesn1
Zfp148
Cfc1
Hyi
Ndufs3
Kbtbd4
Crnkl1
Krtap29-1
Gjc1
Timm23
Parg
Slc30a4
Grpel1
Smndc1
Ostc
Mapk6
Atxn7l1
Rpl34-ps1
Rpl34
Lrrtm4
Myo10
Rassf1
Mastl
Usp53
Inpp5k
Zfp663
Grip1
Frzb
Agfg1
Cysltr1
Dnah8
Atf7ip2
Slc6a12
Sulf1
Dusp4
Gid8
Dido1
Supt6
Sdf2
Tdrd7
Shisa2
Nrarp
Tas2r135
Smoc2
Tgm6
Taar2
Tmed6
Fgf15
Runx1t1
Trps1
Apoo
C6
Uck2
Fbxl2
Zdhhc7
Cped1
Dkk4
Cpa2
Dnah6
Anxa11
Naa60
Fzd2
Stat4
Prickle1
Slc35f5
Vwa8
Txndc5
Nus1
Snph
Nucks1
Dusp5
Fam107a
Gcnt2
Fbxl3
Olfr304
Rfx4
Ralbp1
Prss23
Wdr6
Fmo6
Reep3
Bclaf1
Edem3
Thtpa
Srsf2
Mfsd11
Hoxc6
Ifit1bl2
Cnr1
Defb39
Cep112
Ltbp1
Lrrn4
Odam
Wwp1
Rps12
Siah1a
Mapre1
St3gal2
Akap9
Rbm28
Scd1
Zmat5
Uqcr10
Rnase2b
Ugt1a9
Gnb1l
Zfp111
Fgd4
Kif3c
Plcxd1
Defb6
Sdr42e1
S100g
Dennd4a
Per3
Pltp
Dis3l
Rhpn2
Slc25a53
Srrm2
Ercc5
Sephs1
Kcnip2
Thbs2
Timm8a1
Olfr808
Tll1
Pcbp2
Sipa1l1
Med13l
Spg7
Phc1
Dtna
Itgb8
Csn3
Slc25a24
Phactr2
Adgrg1
Calcrl
Olfr1437
Ints14
Mrps18c
Helq
Rbpj
Pde10a
Knl1
Daxx
Acp6
Msl3
Myh13
Dgke
Fmn1
Iigp1
Nt5c
Rffl
Slc25a17
Arhgef3
Arxes2
Uts2b
Ccrl2
Trpm3
Scg5
Nsun6
Gnat3
Lrrc4c
Cxcl9
Cnot2
Kdm4c
Cyp2ab1
Efhc2
Zfp951
Tmem274
Tm9sf2
Pde1a
Snx6
Wdr45b
Glipr1
H2bc14
Ehmt1
Ncald
Pcm1
Nxph2
Aktip
Gabra2
Xlr3b
Dhrs3
Sec22b
Prdm8
Mtf2
Vrtn
Etv3
Cdhr3
Hes6
Pmch
Olfr1037
Aunip
Rbm41
Rgs12
Enpp2
Trp73
Ndst1
F2rl2
Cyp4f17
Igsf1
Hesx1
Shc4
Traf3ip2
Lig3
Pla2g4a
Esrrg
Macroh2a1
Lsm11
Bod1l
Zfp9
2410137M14Rik
Scn3a
Wdr41
Ccdc60
Lrrc8d
Tpd52l2
Iapp
Lrrc8b
Selenop
Tab2
Epb41l3
Cox7b
Dusp12
Alg8
Adamdec1
Zc3h12c
Efs
Tmem45b
Zfand6
Kcnip4
Lrriq4
Lrrc34
Sgpp1
Lamp2
Samhd1
Atp8a1
Degs1
Adam12
Snx13
Kif3b
Pik3r1
Lrrc15
Srgap3
Serpina3i
Cep162
Prdm13
Cdkn2b
Has3
Dusp6
Ajuba
Pdpk1
Sertad2
Olfr52
Mttp
Grm8
Psd3
Rabggtb
Pth1r
Pgk1
Zfp182
Ptprg
S100a3
Ing3
Gja1
Arhgap15
Pls3
Alkbh6
Unc13a
Chtop
Gsap
Alyref2
Ccpg1os
Zmynd8
Zfp428
Gmip
Gspt1
Gtf3c6
Lefty1
Stat3
F2rl1
Cst9
Lrrtm3
Urgcp
Mtfr1
Kctd1
Tph1
Dsc2
Cxcl11
Pbld2
Sntb2
Dyrk3
Emb
Mrpl45
Pcnx3
Map3k11
Cyp2c39
Hk3
Tex14
Gmnc
Dusp23
Smim13
Tmem230
Tfeb
Sp5
Slc44a3
Arpp21
Alcam
Wipf1
Radil
Cmas
Gm12248
Cnot8
Tti2
Ahctf1
Dhx32
Fbxo5
Sms
Sc5d
Olfr957
Slc26a5
Zfp473
Vrk3
Evl
Creb5
Il17d
Jak1
Zscan10
Gjb6
Rgs5
Pcnx4
Vwa5a
Casp9
Rnf13
Lpar4
Lypla2
Nmnat3
Gm14393
Tulp3
Rsph4a
Rit2
Dapk1
Reep5
Celf2
Trappc3
Phf24
Pde4b
Gadd45g
Phf21b
Prkacb
Cbfa2t2
Kdm4a
Dag1
Abca12
Tm7sf2
Trip4
Csnk1g1
Trp53bp1
Rsbn1
Frg1
Tcim
Slc30a5
Gjb3
Dtnbp1
Slc39a2
Htr2c
Ptpn6
Kbtbd12
Prrxl1
Sumf1
Ecpas
Arrdc3
Atg10
Map1lc3b
1700093K21Rik
Skap2
Itgb6
Sp2
Peli1
Dapk3
Trappc3l
Tafa3
Borcs5
Stra6
Nsmce3
Actn4
Ccng2
Dst
Rimbp2
Mcidas
Cgnl1
Il12a
D130040H23Rik
Trim29
Snx16
Maf
Anapc10
Abce1
Gstcd
Wwtr1
Idh1
Pikfyve
Zfp870
Rcan2
Ttc23
2410141K09Rik
Bola3
Tbce
Cep41
Scd2
Klhl32
Ffar4
Mnd1
Tox
Slc46a3
Ccnl1
Gpx7
Dennd6a
Stk33
Adam26a
Tbata
Ogdhl
Srrm4
Ccdc6
Zcchc13
Abca8b
Gm5148
Ptger2
Kcnj8
Thra
Siva1
Prune2
Srsf7
Trak2
Ubtd1
Mms19
Thsd4
Rasgef1a
Cplane2
Polr3gl
Selenoh
Hsd17b11
Celf4
Insyn2b
Cytip
Fam76a
Nt5c3
Tlk1
Tyr
Nin
Anp32b
Lars
Abcb4
Trim37
Per1
Upf3b
C130073F10Rik
Flvcr1
Phospho2
Ccdc173
Senp2
Nfkb1
Tiparp
Aff2
Acta2
Mgat5
Bdnf
Mbtps1
H2bc3
Timm9
2700049A03Rik
Ubtd2
Cyp2j12
Gm11565
Lrrc19
Hdx
Pcdhgc3
Gpn3
Fam216a
Ubr7
Thg1l
Nipal2
Mat2b
Sptssa
Rbm47
Bcl7b
6330403K07Rik
Mcf2
Mctp2
Pmf1
Slc23a2
Rln1
Pxk
Zswim1
Slc35f2
BC049352
Ppm1f
Slc10a3
Gm44504
Selenov
H2bc8
H2ac8
Krt222
Il18
Bco2
Cox20
Btbd8
Trp53bp2
Porcn
Lrpap1
Ttc30a2
Pgghg
Vps36
Agtrap
Trim3
Mllt10
Mgat4a
Cer1
Cep57l1
Wdr1
Unk
Pdp1
Tle4
Fkbp4
Srebf1
Prl3d1
Zfp931
Crls1
Dnajc6
Ascl1
Yjefn3
Sult6b2
Kcnk13
Lims1
Msantd3
Dpp6
Apold1
Cep250
Hvcn1
Olfr1158
Tmc5
Sdr16c6
Trim33
Mtus1
Gm5165
Larp4
Pou5f1
Nhsl1
Kcmf1
Btbd7
Plekhf2
Aox1
Tent2
Htra4
Slc16a13
Trpv6
Clasp2
Entpd1
Foxo1
Casp8
Zfp945
Pacrgl
Poldip3
Grid2
Nup107
Hoxd9
Gypa
Dsc1
Tapbp
Stk38l
Elavl4
Trim71
Sil1
Hoxb1
Trim7
Bnip3
Mycbp2
Nepn
Marveld2
P4ha2
Ctbs
Zfp707
Ctps2
Pcdhb16
Gab3
Thap4
Ampd3
Cmc1
Fign
Eapp
Fam169a
H4c3
Usp20
BC005624
Cad
Relch
Ptk2b
Arl15
Fam13b
Fam32a
1700037H04Rik
Myl3
Lrrc36
Kctd19
Mast2
Triml2
Chaf1a
Epc1
Tmem181a
Otoa
Agtpbp1
Pccb
Bmpr1b
Pfdn2
Srp68
Cmtr1
T2
Arhgap42
Mlh3
Gpr21
Smoc1
Gcnt1
Rhot2
Cd300lg
Ccz1
Robo2
Myrfl
Zdhhc21
Cdh7
Kmt5c
Raet1e
Raet1a
4931417E11Rik
Myc
Armcx4
Jmjd1c
Fam13c
Sik3
Pafah1b2
Metap1
Olfr298
Lta4h
Kmo
Slc12a4
Cryba4
Cited4
B3gnt5
Reln
Psmc4
Pou2f1
Csnk1a1
Slc28a3
Dab1
Hand2
1700034E13Rik
Cables1
Rab43
Tmem154
Sdc4
Mrps36
Rnf220
Zfp820
4930402H24Rik
Myadml2
Abca4
Rbm25
Il1rn
Zfp329
Il10
Chchd2
Opa1
Nell2
Ctnnd1
Focad
Dnaja3
Rab7
Srsf11
Tbca
Etaa1
Smim19
Slc20a2
Srp19
Mad1l1
Clip4
Cldn4
Tshz3
1700016H13Rik
Psmg4
Vapa
Sgms2
Mynn
Vstm5
Arhgap32
Ubr5
Pnrc1
Atad2
Car3
Dcaf11
0610009B22Rik
Sgcg
Fam111a
Sptb
Mgst1
Cald1
Trim23
Trappc13
Shld3
Fam240b
Oxnad1
Dph3
1700001P01Rik
Lgalsl
Selenos
Cd300ld3
Vwde
Krt84
Cdhr1
Prdm16
Rnf115
Polr3c
Hars2
Hars
Tex50
Mcts1
Slc7a1
Tmem143
Schip1
Nedd9
Prkar2b
Spag9
Zmat1
Mettl9
Cd38
Rin2
Slc2a13
Ankrd22
Tbx18
Tstd2
Ncbp1
Apod
Tbc1d15
Mlip
Zbtb8a
Nacc2
Npas4
Fam118a
Eprs
Psme1
Gm3173
Adh1
Kif13a
Mocs3
Dpm1
Rcan1
Arhgap24
Ywhab
Sfn
Rab15
Rplp1
C330018D20Rik
Tgif1
Set
Mobp
Tbc1d1
Olfm3
Cd200r1
Rbms2
Calml4
Vmn2r117
Arfgap2
Wdr93
Pex11a
Tbc1d16
Ccdc40
Dbndd1
Elf2
Cdc20b
Lxn
Phax
Aldh7a1
E130308A19Rik
Eif5
Rcl1
Krtap17-1
Ercc6l
Bves
B4galt3
Rpl14
Sdk1
Armcx1
Elovl4
Enpp3
Ogfod3
Hexdc
Tatdn2
Ddx60
Nabp1
Lin7a
Tmem100
Slx1b
Adap1
Pakap
Gm8439
Xrn2
Gask1b
Taf5
Tcea3
Bpifb9a
Tcerg1
Hoxb2
Zfp786
Mpp4
Golga3
Atp13a3
Tvp23b
Garre1
Rerg
C77080
Dennd2a
Aldh6a1
Zfp608
Rbms1
Zfp712
Kcnv2
Tmem98
Galnt5
Cd320
Gm20939
Ctbp1
Dock2
Apol7e
Izumo4
Zp2
Ythdf1
Slc15a3
Mob3a
9930104L06Rik
Ngdn
Adipor2
Spryd4
Hnrnpab
Cd244a
Usp1
Habp4
Srgap1
Wee1
Erg
Phtf2
N4bp2
Dynll1