ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rai1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◣ Rai1: Average

◢ SRX1745538: Cortex

◢ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Tex33
Cwc22
Npm2
Ube2i
Atxn7l3b
Hbb-bs
Hbb-b1
Dux
Hbb-bt
Hbb-b2
Pcbp2
Thrap3
Tardbp
Odf2l
1110004F10Rik
Mrpl48
Rbm25
Npas4
Klhl9
Hdhd2
Eif4h
Atp6v1g1
Sdhaf2
Cpsf7
Myl4
Cdc27
Usp14
Mrpl58
Vcp
Ube2l3
Rab2a
Ranbp2
Agtr1a
Trdmt1
Gm39773
Rdh14
Elavl1
Ric8b
Srsf11
Lrrc40
Setmar
Zfp112
Pskh1
Atg4c
Rbm12b1
Skp1
Vmn2r105
Cnbp
Sfi1
Atp5g2
Zbtb21
Zdhhc1
Wdr41
Txnl4a
Gm16286
Psma2
Mrpl32
Psg23
Rmi1
Hnrnpk
Prpf39
Glo1
Tbc1d32
Orc4
Mbd5
Taf8
Luc7l
Kdm3b
Kat7
Eif2s2
Sharpin
Maf1
Rptor
Psmd14
Mapk8ip3
Hnrnph1
Rpgrip1l
Nxf1
Fto
Fbxw4
Psmd12
Copb1
Prcc
Mkln1
Tcea1
Pura
0610009B22Rik
Armh3
Srp54c
Srp54b
Srp54a
Ythdf2
Rnf14
Dis3l
Mlf2
Rcn2
Zfp319
Usb1
Rbm7
Gm5617
Rab11b
Tmprss5
Nbr1
Brca1
Fbxw5
Cd81
C8g
Sf1
Dhx30
Rwdd2b
Atp5g3
Crtc2
Actr8
Dennd6a
Tnpo1
Gosr1
Tmem141
Nenf
Snx4
Pank3
Utp11
Zfp438
Dnm1l
Rbbp6
Pex7
Mfn2
Mrps28
Hacd3
Fam120b
Glra1
Pja2
Hectd1
Smarce1
Ogfr
Tomm20
Sun1
Fam98b
Nupl2
Endov
Sem1
Exo1
Actr1a
Psph
Hps5
Gtf2h1
Cct6a
Leng8
Zc3h18
Gpam
Pdcd6ip
Ibtk
Zfp638
Ube3a
Psmc6
Ythdc1
Casd1
Slc25a36
Amfr
Zmat5
Uqcr10
Tmem135
Amz2
Nup214
Zfp963
Chtop
Tlk2
Clk3
Cacng2
Tent2
Hsd17b12
Uqcrc2
Snrpd1
Smu1
Zfp12
Tax1bp1
Rbm39
Ammecr1l
Sf3a1
Ccdc157
Hnrnpul1
Brk1
Slc30a5
Rpl19
Vamp3
Rp9
Ndel1
Dele1
Sltm
Pink1
Magoh
Rpl14
Hnrnpm
Eaf2
Zscan25
Smndc1
Capn7
Oxsm
Ngly1
Fip1l1
Zfp866
Plpp7
Zdhhc21
Pitpna
1810013L24Rik
Bclaf1
Galnt11
Akap8l
Tmem17
H4f16
Psmd7
Rbm12b2
Mettl25
Ccdc59
Birc6
Sertad2
Rraga
Cdip1
Usp5
Supt6
Sdf2
Clpx
Cdca3
Rnf138
Prmt6
Eef1akmt2
Mtpn
Usp47
Ubr3
Pkd1
Hspe1
Hspd1
Psma3
Polr2m
Ncl
Naa38
Cyb5d1
Rab5b
Scamp2
Tor1aip2
Tor1aip1
Osgin2
Rab18
Cox14
Tomm70a
Trim27
Tmx4
Smarcb1
Gmeb2
Ssr3
Srsf6
Map2k2
Oxnad1
Dph3
Apc2
Sike1
Serinc1
Hnrnpll
1700071K01Rik
Nek4
Btbd9
Slc36a2
Rc3h1
Lrrc58
Ipo7
Sugp1
Ppig
Napa
Mau2
Arih1
Smarcad1
Rps29
Ythdf3
Pgap4
Ppp3cb
Ptrhd1
Cenpo
Hsf1
Bop1
Pafah1b1
Mff
Fsd1l
Wdr34
Eif3a
1700066M21Rik
Vps4a
Rabl6
Itgb1
2300009A05Rik
Vdac1
5031439G07Rik
Stx18
Clk1
Chd1l
Mfsd14a
Scaf8
Kifbp
Actr3
Rab11fip2
Iqcb1
Dusp11
Vps37a
Sod1
Rsbn1
Cnot7
Zfp26
Zbtb44
Tnks2
Serp1
Ola1
Napepld
Eif2a
Tia1
Sf3a2
Plekhj1
Eef1a1
Tspyl1
Tnrc6a
Scaf4
Pcmt1
Lats1
Slc25a3
Dennd10
Crk
Klhl42
Farp2
Tcp1
Mrpl18
Mcl1
Dock7
Zfp87
Trim44
Eri3
Qtrt2
Pan3
Dhx15
Ccdc191
Dlst
Tbce
Gm3448
Gm3417
Exoc2
9030025P20Rik
Zdhhc20
Hipk3
Exoc6b
Nudt19
Lmbr1
Cibar1
Tmem43
Thap3
Pdcd6
Ndufb2
Chchd4
Psma1
Rtcb
Naa30
Lman2
Gpd2
Eral1
Cacul1
Anapc10
Abce1
Zfp871
Iba57
Cd300e
Wdfy3
Tubd1
Sf3b1
Setd2
Rps6kb1
Inpp5b
Fam174a
Reep3
Plaa
Nup205
Map3k3
Hspa4
Fam168a
Eif5b
Phrf1
Fhit
Washc1
Osbpl2
Zmynd11
Ica1
Ccnt1
Nacc1
Dzip3
Cip2a
Aplp1
H2bu2
Eif2ak4
Rnf215
Rai1
Saraf
Uhrf2
Ndufa10
Ice2
Opa1
Amn1
Hmgxb4
Hmgn1
Dtwd2
9430015G10Rik
Srebf1
Mios
Rpl27a
Nrd1
Katnbl1
Nalcn
Gm10509
Dido1
Ccser2
Tm9sf2
Ptpn23
Elp1
Eif3e
Crppa
Ambra1
Abitram
Strn3
Hps3
Ap4s1
Pdia3
Hnrnpa0
Catsper2
Smap1
Btrc
Zfp74
Zdhhc13
Twf1
Tm2d1
Ppp5c
Lrrc57
Haus2
Ddx50
Dnajc25
Ckap5
Ube2e1
Phf7
Pcbp1
Bap1
Ankle2
Ilkap
Rab1a
Arf4
Tbca
Ssrp1
Rplp0
Med23
B3galnt1
Arl2bp
Stk16
Glb1l
Top2b
Scmh1
Rgl1
Ddx23
Vps51
Pttg1ip
Zfp868
Setd5
Narf
Zfp263
Usp24
Ptpmt1
Dnajc1
Cd36
Zfp637
Scoc
Pef1
Snrpe
Uqcrh
Slf2
Rab43
Lrrc41
Glg1
Recql4
Lrrc14
Gdf3
Atp5b
Aatf
Wbp11
Ube2w
Slc15a4
BC049715
Slf1
Mib1
Larp1
Guf1
Coq2
2210408I21Rik
Txndc11
Snap91
Ifi47
Ube2o
Sugct
Mplkip
Inpp1
Gpr75
Brwd1
Atp5l
Tspan3
Dennd4c
Mettl9
Kdm4c
Far2
Bmt2
Rab3a
Pgp
Oxa1l
Mrps26
Mlh1
Epm2aip1
Lysmd4
Gpx4
Cfap410
Zfp607b
Uqcrfs1
Rfxap
Map3k10
Ldah
Hexim2
Ugcg
Trpc4ap
Patj
Olfr822
Mtdh
Zc3h4
Rnf10
Raf1
Prkacb
Nfkbia
Ddrgk1
Cbll1
Zbp1
Nckipsd
Cpsf1
Zkscan8
2700097O09Rik
Rpsa
Mgrn1
Dcaf6
Actr2
Sugp2
Gdap1
Ccnt2
Armc6
Zfp62
Ubxn8
Smg1
Setd7
Rnf8
Pgap2
Pfn4
Nup98
Fam228b
Ep400
Vps26b
Tmem267
Ncapd3
H4c1
Arfgef1
Zfp398
Btf3
Ankrd17
Tet3
Snx17
Rab11fip5
Herpud2
Haus1
Eif2b4
Brd3
Atp5a1
Arf2
2510009E07Rik
Zyg11b
Zfp386
Trrap
Scarb2
Sacm1l
Hnrnpu
Cfl2
Anapc4
Bub3
Borcs7
Atp9b
Tmem175
Rsrc1
Rps13
Gak
Zkscan1
Spg20
Sel1l
Rasgrp3
Rab5if
Msh6
Med15
Gnpat
Cyld
Ankrd54
2810004N23Rik
Smim11
Slc25a27
Prrc2c
Cyp39a1
Zfp606
Ubn2
Tdrd3
Stambp
Slc25a42
Pdik1l
Lyrm1
Gnas
Dcun1d3
Api5
Trak2
Rbm27
Khdc4
Jagn1
Ift52
Herc2
Cwc27
Pcid2
Fubp1
Dnajb4
Cul4a
Zcchc7
Ttc9c
Tarbp2
Hnrnpul2
Psmb2
Fbxl3
Dcaf5
Zbtb8os
U2surp
Trim41
Rhot1
Rbbp4
Arl5a
Mynn
Gm33989
Eif4g2
Zfp358
Tmem231
Sec16a
Rhob
Kpna6
Cbr4
Wasf3
Myadm
Mdm4
Calr3
Arl14ep
1700030K09Rik
Rbm22
Ddx39b
AW549877
Tmem115
Rbm18
Mrrf
Ints8
Micos10
Malsu1
Wdr77
Vps35
Npepps
Nepro
Ndufa8
Morn5
Atp5pb
Abca5
Dnajb13
Uri1
Uhmk1
Fbxo42
Dus4l
Cog5
Ccny
Caml
Acot6
Smim10l1
Rgmb
Iars2
Ehmt1
Cherp
Trit1
Map4k5
Atl1
Rnmt
Fam210a
Eif4a2
Ccnl1
Ccdc117
Urgcp
Ubap1
Slc45a1
Frs2
Yipf4
Lsm2
Gpr89
Zfp598
Ulk2
Surf4
Stkld1
Actb
Ypel5
Rtf1
Hspa8
Gm3435
Ywhab
Med17
Gyg
Gne
Ccdc149
Usp22
Tusc3
Slc36a1
Sik2
Rfx7
Mrpl17
Fem1b
Ccnl2
Atp6v1c1
App
Zfp655
Zc3h12c
Xpo5
Polh
Picalm
Lig3
Golm2
Zswim8
Mapk9
Lins1
Entpd7
D5Ertd579e
Cops3
BC048403
Arhgap39
Nae1
Fam32a
Drap1
Car7
Aco1
AI837181
Wdr33
Srsf1
Sp2
Socs6
Psmd2
Pmm1
Smg9
Sap130
Rfc4
Katnal1
Chchd6
Arl8a
Rragc
Rplp2
Rpl30
Gps2
Ankrd13c
Zzef1
Zfp113
Ttc7b
Scamp1
Rab22a
D2hgdh
Cyb5d2
Ccdc90b
Arcn1
Trim24
Tgfbrap1
Psmb5
Pnn
Mapk14
Maml1
Klc1
Kansl1
AI597479
9530077C05Rik
Zc3h6
Nadk
Mob4
Fbxo4
Zmym5
Senp6
Rrp1
Rexo1
Nup153
Bpnt2
Zfp422
Naa25
Gnl2
Slc35a3
Nek9
Ncor2
Nckap1
Ddx6
Atp9a
Klhl24
Iqsec3
Hdac4
Tmem33
Rhbdd1
Phc3
Ist1
Cul5
Cnih1
Tra2b
Slc35d1
Rap1b
Ptpn9
Ntmt1
Zfp334
Slc25a4
Rcbtb1
Pdss2
Lrrc51
Spindoc
Fbxl4
Cers2
Appl1
Anxa9
Wac
Ube2q2
Pla2g15
Phc2
Paip2
Got2
Fam76b
Cep57
Atp6v0a2
Ube2d3
Srsf10
Snx2
Rb1cc1
Lnpk
Gpatch8
Fbrs
Etv3
Afg3l1
Son
Sec13
Rock1
Repin1
Kif5b
Fbxo21
Dnajb6
Stard3nl
Srm
Septin2
Rsl1d1
Rft1
Rbm6
Hdlbp
Capn2
Zfp148
Tbc1d19
Sult4a1
Opa3
Mrps15
Mfsd12
Maz
Inpp5f
Gpx7
Fbxo7
Fbxo41
Dynlrb1
Cox6c
Cisd1
Cct2
Akr1b3
Tada1
Sspn
Smim7
Prorp
N4bp1
Magohb
Dph6
Dnal4
Atxn2
Ahcyl2
Utp3
Rps23
Prnp
Prn
Ehbp1
Dnaja2
Cpsf6
Wasf1
Usp13
Srf
Rbsn
Peli1
Larp4
Zkscan3
Zfp943
Zfp942
Zfp622
Rab28
Pak2
Marchf5
Hif1a
Epc1
Dennd6b
Cycs
Cpeb3
Cbl
Arl2
Zfp592
Zfp551
Ttc21b
Tmed10
Tdg
Pgrmc2
Wapl
Pcm1
Ncoa4
Hddc2
Fam193a
Wdr43
Ubxn7
Selenok
Nupr1l
Map1lc3a
Hagh
Fahd1
Esyt2
Dnajb9
Cnnm3
Brd1
Atp6v0e2
Ruvbl1
Hnrnpf
Drg1
0610030E20Rik
Uimc1
Stau1
Spag9
Secisbp2l
Pomt2
Pip4p1
Gtpbp8
Gstz1
Efr3a
Chmp3
Atxn2l
Akt1
Ahcyl1
Usp36
Slc30a1
Senp8
Selenot
Rab30
Phlpp2
Phkb
Nfx1
Ndufb1
Myo9a
Lsm6
Jak1
Itfg1
Cpsf2
Cbfa2t2
Xrn2
Uqcrq
Cct5
Atrn
Atpsckmt
Unc50
Tmem87b
Srp14
Ino80d
Cox8a
Coa5
Clcc1
Smim13
Polr3e
Ociad1
Krba1
Ift22
Galk2
Exosc3
Csnk1d
Cops2
Cnot3
Bnip3l
Zfp689
Sec61a2
Cep170b
Arf5
Ahctf1
Uvrag
Trmt10a
Rpl3
Pusl1
Mttp
Ldlrad4