ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745538 | Cortex
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◣ SRX1745538: Cortex

◢ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Tex33
Hbb-bs
Hbb-b1
Cwc22
Atxn7l3b
Hbb-bt
Hbb-b2
Npm2
Pcbp2
Ube2i
Tardbp
Klhl9
Npas4
Odf2l
1110004F10Rik
Usp14
Hdhd2
Mrpl58
Thrap3
Luc7l
Mrpl48
Rbm25
Myl4
Cdc27
Psma2
Mrpl32
Eif4h
Zfp319
Usb1
Rwdd2b
Atp6v1g1
Txnl4a
Gm16286
Rab2a
Rdh14
Glo1
Setmar
Skp1
Atp5g2
0610009B22Rik
Sdhaf2
Cpsf7
Zdhhc1
Trdmt1
Hacd3
Srp54c
Srp54b
Srp54a
Ranbp2
Rmi1
Hnrnpk
Rbm12b1
Zbtb21
Atg4c
Taf8
Rpgrip1l
Fto
Ric8b
Eif2s2
Dis3l
Zfp438
Amfr
Vcp
Gm39773
Zfp112
Actr8
Tmem141
Pex7
Pskh1
Kat7
Ythdf2
Tbc1d32
Gosr1
Rab11b
Fbxw5
C8g
Rpl19
Srsf11
Lrrc40
Rbm7
Gm5617
Zc3h18
Pank3
H4f16
Capn7
Ube2l3
Nbr1
Brca1
Ibtk
Cd81
Hps5
Gtf2h1
Nup214
Ammecr1l
Rnf14
Amz2
Elavl1
Mrps28
Cdip1
Psmd14
Rbbp6
Chtop
Cacng2
Hsd17b12
Mapk8ip3
Tcea1
Snx4
Vamp3
Plaa
Fbxw4
Magoh
Smarcb1
Fam120b
Ythdf3
Exo1
Orc4
Mbd5
Zfp963
Zscan25
Psmc6
Prpf39
Nrd1
Akap8l
Nxf1
Hnrnpul1
Pink1
Trim27
Zfp87
Ube3a
Actr3
Amn1
Pja2
Cnbp
Armh3
Zfp866
Psmd12
Fam98b
Oxsm
Ngly1
Zmat5
Uqcr10
Psma3
Pafah1b1
Hnrnph1
Dhx30
Utp11
Nupl2
Smu1
Sod1
Sugp1
Mau2
Pura
Clk3
Prcc
Tax1bp1
Ola1
Rnf8
Supt6
Sdf2
Tnpo1
H2bu2
Clpx
Hectd1
Pdcd6ip
Zdhhc20
Mlf2
Actr1a
Ambra1
Mcl1
Mib1
Rptor
Stk16
Glb1l
Sf3a1
Ccdc157
Ncl
Sike1
Sik2
Smarce1
Plpp7
Ssr3
Agtr1a
Sharpin
Maf1
Mettl25
Ccdc59
Stx18
Nalcn
Serinc1
Exoc6b
Nudt19
Tmprss5
Sun1
Sf3a2
Plekhj1
Tdrd3
Dennd6a
Gm3448
Gm3417
9030025P20Rik
Napepld
Tm2d1
Mkln1
Uqcrc2
Psg23
Usp5
Cdca3
Btbd9
Napa
Itgb1
Pdcd6
Pfn4
Fam228b
Usp47
Dennd10
Slc25a36
Cox14
Tbce
Med23
Prmt6
Mtpn
Mfn2
Leng8
Zyg11b
Crtc2
Clk1
Pttg1ip
Ptrhd1
Cenpo
Zmynd11
Gdap1
Glra1
Zfp12
Psma1
Tmem175
Gak
Trim41
Qtrt2
Ccdc191
Btrc
Endov
Mff
Wdr34
Patj
Kdm3b
1810013L24Rik
Tmem17
Thap3
Naa38
Cyb5d1
Hnrnpll
Dele1
Ubr3
Vdac1
Dzip3
Cip2a
Fam174a
Eef1akmt2
Eral1
Sf3b1
Zfp74
Top2b
Dnm1l
Ndel1
Oxnad1
Dph3
Hipk3
Recql4
Lrrc14
Tusc3
Bclaf1
Mdm4
Sf1
Casd1
Brk1
Smndc1
Zdhhc21
Rock1
Rcn2
Psmd7
Tor1aip2
Tor1aip1
Rabl6
Zfp868
Gpr75
Khdc4
Galnt11
Polr2m
Rps29
Naa30
Vps26b
Ncapd3
Trit1
Hnrnpm
Ndufb2
9430015G10Rik
Lysmd4
Atp5g3
Rnf138
Gm10509
Mlh1
Epm2aip1
Dcaf5
Ube2o
Sem1
Phrf1
Vps4a
Scaf8
Nup205
Ddx50
Tspyl1
Saraf
Mgrn1
Rbsn
Copb1
Iba57
Ndufa8
Morn5
Cherp
Map4k5
Atl1
Dennd4c
Ogfr
Sltm
Srsf6
Nacc1
Gdf3
Ythdc1
Rab18
Rpl27a
Mrps26
Api5
Larp1
Sugct
Mplkip
Trak2
Snrpd1
Rbm12b2
Nek4
Ipo7
Far2
Ubxn8
Gnpat
2810004N23Rik
Nenf
Pitpna
Rab3a
Trrap
Zcchc7
Tarbp2
Calr3
1700030K09Rik
Rraga
Smarcad1
Psph
Cct6a
Trim44
Zfp871
Nckipsd
Zkscan8
Pomp
Zfp26
Tcp1
Mrpl18
Ssrp1
Zfp606
Gnas
Gpd2
Cbll1
Ttc21b
Tmem43
Chchd4
Anapc4
Gne
Lins1
Fbxo21
Eif2ak4
Srebf1
Nepro
Cd300e
Xpo5
Polh
Bnip3
Rbm39
Setd5
Zfp637
Entpd7
Tmem135
Sugp2
Armc6
Ankrd17
Ubn2
Cwc27
Gm3435
Eaf2
Iqcb1
Pdia3
Catsper2
Kdm4c
Mtdh
Sp2
Pfn1
Rab11fip2
Atp6v0a2
Rps23
1700066M21Rik
Arf4
Rnf10
Opa1
Crppa
Tmem33
Fth1
Borcs7
Mrpl17
Ist1
Rbm6
Akr1b3
Trmt10a
Mttp
Snw1
Rab5b
Anapc10
Abce1
Smim11
Gm33989
Npepps
Caml
Yipf4
Gpr89
Got2
Ube2d3
Capns1
Scamp2
Zfp263
Mettl9
Psmb2
Hdac4
Afg3l1
Cfap20
Serp1
Eif2a
Zfp607b
Map3k10
Snx17
Eif2b4
Rsrc1
U2surp
Lrrc51
Mtpap
Ldah
Ttc9c
Hnrnpul2
Myadm
Nfx1
Zfp869
Schip1
Sod2
Lrrc58
Pcmt1
Lats1
Atp5b
Prkacb
Ubap1
Wbp11
BC049715
Ifi47
Rab11fip5
Septin2
Hdlbp
Cycs
Wdr41
Ccnt1
Ep400
9530077C05Rik
Safb2
Safb
Pan3
Hnrnpa0
Snrpe
Brd3
Zfp358
0610030E20Rik
Zfyve27
Rpl14
Pgap4
Hsf1
Bop1
Ankle2
Inpp1
Nfkbia
Rbm27
Rbm18
Mrrf
Atp6v1c1
Exosc3
Rbl2
Pcna
Sdad1
Dock7
Usp24
Actb
Zfp148
Wdr43
Aarsd1
Gtf3c4
Canx
Tpra1
Tdrd7
5031439G07Rik
Dlst
Map3k3
Eif3e
Uqcrh
Lrrc41
Slc45a1
G3bp2
Tspyl5
Slc25a3
Reep3
Rplp0
Wasf3
Gyg
Dph6
Epc1
Pdcd7
Nfxl1
Smg5
Pkd1
Ccnt2
Mynn
Ccnl2
Gps2
Tmem70
Tubd1
Rps6kb1
Elp1
Abitram
Hexim2
Aco1
Vps13c
Fam122a
Gpam
Bmt2
Rnmt
Fam210a
Prorp
Stx16
Rpl18a
Rp9
Chd1l
Sec16a
Lsm2
Med17
Ddx6
Gpx7
Zfp689
Ccar1
Mbd3
Washc3
Mkrn1
Rai1
Rbm22
Fam76b
Cep57
Pxmp4
Fhit
Lrrc57
Haus2
Setd7
H4c1
Med15
Cops3
Apc2
Dhx15
Exoc2
Arl5a
Arl14ep
BC048403
Drap1
AI837181
Pmm1
Pebp1
Rc3h1
Inpp5b
Zdhhc13
Oxa1l
Smim10l1
Rrp1
Pdss2
Utp3
Pak2
Phf5a
Aco2
A430033K04Rik
Tlk2
Tm9sf2
Ptpn23
Ddx23
Aatf
Tet3
Ppme1
C2cd3
Fus
Fam168a
Ppp5c
Atp9b
Rfx7
Ncor2
Dnajb6
Rft1
Dnajb9
Rplp1
4932438A13Rik
Hspa4
Narf
Herpud2
Larp4
Pcm1
Fam193a
Uchl5
Ro60
Mtarc2
Tmx4
Pcbp1
Hspa8
Zzef1
Cyb5d2
Zc3h6
Cisd1
Rangap1
Srprb
Pcyox1l
Tmbim6
Dennd4a
2700097O09Rik
Surf4
Stkld1
Mapk9
Rplp2
Herpud1
Abhd12
Ier3ip1
Hspe1
Hspd1
Dusp11
Tia1
Hps3
Xrn2
Idh3a
Imp3
Mvk
Mmab
Lmbr1
Washc1
Kif5b
Cep83
Trmo
Suco
Lman2
Phf7
Bap1
Mob4
Pnpla8
Fbxl5
Slc22a5
Dtwd2
Smap1
Dnaja2
Csnk1d
Zfp157
Pum2
Aplp1
Glg1
Sel1l
Stard3nl
Agbl3
Zbtb11
Cnot1
Kcmf1
Itprid2
Iqce
Mapre2
Zfp638
Crk
Slf2
Rhot1
Rragc
Zfp334
Tdg
Phkb
Itfg1
Krba1
Whamm
Actr5
Uxs1
Rccd1
Stambpl1
Vps37a
Cnot7
Pgp
Zbp1
Rap1b
Paip2
Peli1
Setx
Qrich1
Triqk
Stx5a
1700092M07Rik
Klhl42
Ice2
Katnbl1
Bub3
Arl8a
Zfp113
Nup153
Klhl24
Iqsec3
Mrps15
Pusl1
Acap3
Dyrk1a
Srsf4
Pnisr
Tent2
Eef1a1
Ddrgk1
Zbtb8os
Rbbp4
Ankrd13c
Rtl6
Eif4g2
Tmem115
Slc35d1
Lypla1
Tomt
Lamtor1
Arnt
Acbd5
Clpp
Txn1
Fastkd1
Txndc15
Ppig
Vps51
Atp5l
Arhgap39
Tra2b
Arhgef7
Adar
Pkm
Ptdss1
Mterf3
Tmx3
Birc6
Pef1
Ift52
Rab28
Arl2
Zfp592
Atl3
Brwd1
Rps13
Vps35
Fam32a
Sap130
Fbxl4
Ncoa4
H13
Gatd1
Akr1a1
Ccdc50
Cc2d1a
4930432K21Rik
Fip1l1
Raf1
Lyrm1
Dcun1d3
Urgcp
Psmb5
Atxn2
Ahcyl1
Uqcrq
Pik3ca
Agfg1
Med21
Gmps
Erc1
Psap
Ankzf1
Vmn2r105
Olfr822
Tmem231
Ccnl1
Atp6v0e2
Lipo2
Smarcc1
Setd1a
Mfsd14a
Spg20
Dynlrb1
Rab30
Ap1m1
H3c15
H3c14
H2ac19
H2ac18
Zfyve9
Dcaf11
Tomm20
Rnf215
Zfp386
Ccny
Ypel5
Pnn
Rsl1d1
Dgke
Sde2
Suz12
Ndufa10
Usp22
Hif1a
Cdadc1
Ddx42
Ccdc47
Pced1a
Nacad
Cox5a
Ptpn2
Tex10
Eri3
Rpl30
Pla2g15
Cox6c
Zfp943
Zfp942
Gtpbp8
Sesn1
Upf1
Stk25
Snrpa1
Clk4
BC049762
Wtap
Poc1b
Galnt4
Zfp251
Cog2
Bphl
Cndp2
Cdkn2c
Rtcb
Ilkap
Zfp398
Pcid2
Cul4a
Zfp655
Son
Inpp5f
Tmed10
Manbal
Cntrl
Hint1
Med11
Kpna6
Nupl1
Xkr7
Kifap3
Crtc3
Actr1b
Osgin2
Tomm70a
Tnks2
Cibar1
Twf1
Scarb2
Malsu1
Ccdc90b
Drg1
Cplx2
Tcaim
Calr
Cpd
Hmgcll1
Oser1
Gabarapl2
Srxn1
Smn1
Rubcn
Fyttd1
Clock
Gtf2i
Dido1
B3galnt1
Gpx4
Ugcg
Hnrnpu
Fem1b
Cox8a
Galk2
Cops2
Ubr2
Kdelr1
Arhgef9
Sacs
Mthfsd
Dars
Get4
Gspt1
Tnip2
Slf1
2210408I21Rik
Zc3h4
Acot6
Zfp282
Syt14
Cstb
Iffo2
Rnf208
Wdr77
Atp5pb
Dnal4
Unc50
Coa5
Bnip3l
Dag1
Gdf1
Cers1
Rnaseh2c
Hacd2
Sec22a
Tmem168
Map2k2
Setd2
Ccser2
Dennd6b
Rhbdd2
Ndufc2
Fis1
Egln1
Zfp612
Ppp1cb
Acap2
Acaa1a
Rsbn1
Cd36
Ankrd54
Srsf1
Fbxo3
4931422A03Rik
Tmem167b
Enox2
Tarsl2
Wdr26
Mtr
Tmem199
Poldip2
Ccdc181
Cbr4
Eif4a2
Sult4a1
Usp36
Ndufb1
Cpsf2
Tomm34
Tomm7
Itsn1
Cryzl1
Smyd2
Acat1
Atg16l1
Clip3
Pom121
Pdia6
Pgap2
Nup98
Zkscan1
Cnih1
Ntmt1
Tada1
Pomt2
Gstz1
Adam10
Npm1
Fbxo25
Tcte3
Ermard
Cox7c
Snx30
Uqcr11
Bpnt2
Gpatch8
Jakmip3
Gbe1
Nsfl1c
Ankrd40
Zfp174
Yipf2
Timm29
Mfsd12