ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11593784 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◢ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◣ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Ifi205
Hoxc5
Kmt2a
1700029F12Rik
Hoxd4
Trim2
Cltc
Hoxb4
Zc3hav1l
Rnase2b
Rnf214
Serpinb9e
Cdk18
Zfp996
Fem1al
Stard10
Cdca7
Tbce
Gm13212
Stra6l
Fzd10
Nck2
Prl6a1
Slc40a1
Shmt1
Dennd1b
Gm29802
Tmem11
Saa3
Itprip
Pccb
Mtf2
Ogdhl
Tnnt3
Upp1
Tfrc
Rin2
Upk1a
Dsc2
Fgd4
Zfp982
Atp6ap1l
Zfp512b
Ptprs
Tmod3
Hoxb9
Stag3
Gpc2
Traf3ip2
Ift46
Rnf128
Hoxc4
Gm829
Nlrc3
Tbc1d2
Fasl
Smarcad1
Mllt1
Rpe
Sema4d
Utrn
Efna4
Reep3
Rock2
Grip1
Hdac2
Ffar4
Lrrn4
Ints6
Ogt
Eif2b5
Micu2
Smagp
Dao
Mdfic
Sgms1
Xntrpc
Snx24
Gsdma3
Klhl24
Pdik1l
Mid1
Pth1r
Nr6a1
Exoc6
Rgs5
C130073F10Rik
Meis1
Vps37c
Fbp2
Slco1a6
Tsen54
Caskin2
Sh2d4b
Mgat4b
Serpinb9g
Tmem40
Neto2
Tmem185b
Ccl20
Cst9
Olfr368
Pou5f1
Terf1
Morc3
Prl7d1
Bmp4
Tpd52
Kbtbd6
Pygb
Gid4
Scmh1
H2az2
Atf7ip2
D630023F18Rik
Arpc2
Arg1
Trp53bp2
Gabpb2
Zdhhc21
Hsd17b2
Dppa1
Abcg2
Zfp91
Lpxn
Tdrd7
Arhgap12
Zfp280d
Atl3
Sycn
Dnm2
Rrm2
Zyg11a
Sh2d5
Dusp6
Mmp27
Zcwpw1
Mepce
Slc25a24
Olfr52
Gcnt3
Gcnt2
Slc7a9
Tex14
Chac2
Cwc22
Tspan9
Morc2a
Tes
Zfp821
Ist1
Ube2q1
Gtf3c6
Gm12789
Acp6
Amt
Cd38
Zbtb39
Ly6c1
Ak1
Foxo1
Foxred2
Osbpl9
Ehbp1l1
Cep97
Eif5a2
Zfp568
Arhgap32
Bpifc
Plin3
Ehd4
Wnt11
Tgif1
Sdf4
B3galt6
Trim44
Tasor
Zfp408
Zfp976
Necap2
Mcm3
Olfr1342
Rbbp8nl
Phf11d
Ciart
Pogk
Otx1
1700067K01Rik
Dmtn
Hes1
Knl1
H4f16
Atp5mpl
Vrk1
Oas3
Hoxa4
Tti2
Rbm47
Cldn4
Tkfc
Ddb1
Specc1
Agfg1
Alpk3
Alyref2
A430005L14Rik
Olfr222
Tnfrsf9
Eci3
Gchfr
Praf2
Iftap
Eid2b
Kcnip2
Gse1
Nuak2
Pcbp4
Sfi1
Hacd2
1700008O03Rik
Sfn
Taf5
Zfp28
Fem1a
Cyp2g1
Brf2
Zscan20
Rabep2
Lama3
Cradd
Mcrip1
Cd47
Krtap2-4
Hdgf
Dlst
Myo18a
Cacnb2
Krt9
Pcnx3
Map3k11
Tex19.1
Eif3f
Abcf3
Pcyox1l
Sumo1
Mief2
Flii
Rnf130
Ivns1abp
Anapc11
Alyref
Vamp9
Sptbn1
Gsto1
Nlrx1
Elf5
Prkd1
Olfr298
B9d1
Zcchc7
Ifnz
D630045J12Rik
Cd2bp2
Tafa3
Calu
Lpp
Hibadh
Usp1
Gpr4
Pitpnm2
Trmt44
Ptk2
Snx12
Tlr4
Mageb16
Ccdc120
Chst2
Mrps23
Art5
AU018091
Rcan1
Zfp975
Zfp78
Plet1
1110002E22Rik
Pus3
Ddx25
Cmc1
Tmcc1
Psap
Usf3
Asb8
Depdc7
Per3
Kmt5c
Lgsn
Syt8
Lin28a
Thpo
Triml2
Nr1h3
Herpud2
E2f4
Ptpdc1
Serf1
Zkscan5
Vav3
Ldb1
Znrf1
Zfp87
Hoxa7
Nrde2
Ltbr
Tmem59
Pcbp2
Nans
Tceanc2
Wsb2
Tpbg
Cutc
Cox15
Pcnx4
Abhd17a
Cdsn
AW549877
Baz1a
Plekhg3
Tph1
Fhit
Morc1
0610009B22Rik
Eapp
Sdc4
Zfp984
Trip4
Csnk1g1
Duoxa2
Duox2
Rbm25
Insl3
Zmynd8
Trim6
Urgcp
Agrp
Slc7a1
Ctla2b
Gjb3
Rdm1
Hook1
Plaur
Acot11
Cd86
Slc28a3
Plag1
Chchd7
Rasgrp4
Ccpg1os
Ccpg1
Ppat
Zfp518b
Paics
Cop1
Arhgef2
Supt7l
Slc4a1ap
Klf16
Capns1
Uqcc2
Stk25
Eif2ak4
Ttc5
Nppb
Eomes
Tcea3
Dusp23
Lcmt2
Adal
Ccdc90b
Mtap
Cavin3
Aven
Commd1
Nudcd3
Rhox4g
Hbp1
Plin2
Ppp2r5a
Ndst1
Ttll11
Lmo4
Ccdc166
Gnas
Poldip3
Srf
Yy1
Rrn3
Kctd5
H4c11
Hoxd3
Gm11545
Vwa5a
Tent5d
Ncoa7
2610002M06Rik
Dyrk3
Aip
Tbx3
Tmem245
Adipor2
Larp1
Exosc10
Scd1
Mink1
Ccdc33
Fam107a
Dynll1
Mga
Tufm
Smad6
Deptor
Mgat5
Cdc42ep4
Rnpep
Ubxn2a
Cabcoco1
Zfp281
Nes
Prim1
Atg10
Sumf1
Tatdn2
Hspe1
Hspd1
Raver1
Pira7
Pira6
Pira4
Pira11
Gm14548
Nanp
Relch
Tomm7
Fubp3
Rnf157
Mfge8
Cpne3
Mta2
Kdm3a
Epc2
Mgat4c
Sgo1
Zfp148
Adnp
Usp47
St6galnac6
Ano8
Cysltr1
Dag1
Epb41l5
Trim55
Ascc1
Smarcd2
Grhl2
Adora1
Agpat1
Zfp689
Mrpl11
Gm3776
Eif1ad
Banf1
Trim29
Grpel2
Zfp523
Nmi
Swsap1
Gm973
Kif2a
E2f6
Usp38
Nfkb1
Aox1
Fbxo15
St3gal2
Cecr2
Pemt
Dnajb1
Bid
Dapk3
Timp2
Setdb1
Noct
Slc16a5
Zfp524
Fiz1
Ube2f
Faf1
Cc2d1a
4930432K21Rik
Ccdc194
Rtn2
Etv2
Rack1
Ank1
Abcc1
Pih1d1
Aldh16a1
Erbb3
Ythdf1
Mr1
Prnp
Prn
Amd2
Amd1
Sertad2
Tctex1d4
Csnk1a1
Btbd19
Slc45a3
Mlana
Nptx2
Zfp385b
Gas2
Fancf
Ak2
Gm13285
Gm13275
Gm13287
Epcam
Tdrd1
Slc33a1
Asf1a
P2rx4
Tssk6
Ndufa13
Glce
Dph5
Zfp143
Tdrkh
Klhdc4
Ddx5
Cep95
Smarcal1
Ptpn12
Nhsl1
Pcsk1n
Synb
Eloc
Echdc3
Znrd1as
Znrd1
Rhox4e
Ndufs7
Cenpj
Pou2f1
Thg1l
H1f3
Akap17b
Agfg2
Vil1
Speg
Gpr180
Stx4a
Madcam1
Hdac7
Tmem101
Gpn3
Fam216a
Eef1aknmt
Jmjd1c
Luzp1
Mllt6
Phlpp2
Sdr39u1
Retreg2
Cnppd1
Trub2
Rbm46
Poglut3
Frrs1
Adora2b
Fancd2os
Mon1b
Rpl37a
Cnih3
Rbbp5
Iars2
Triobp
Hps5
Gtf2h1
Atg16l1
Ajuba
Nae1
Car7
Cdk6
2310030G06Rik
Sae1
Nin
Atp5l
Rab5b
Gpx1
Bhmg1
Zfp37
Tmem126a
Alms1
H3c15
H3c14
Tmem144
Taf15
Zfp54
Tspan14
Shc1
Cks1b
Cluap1
1700037C18Rik
Abca8b
Ypel1
Tram1
Nt5c2
Lta4h
Ina
Ifi204
Brd3
Dpysl2
Uggt1
Nrarp
Plec
Ccne2
Utp15
Ankra2
Rps11
Ezh2
Gm2a
Zfp977
Trmt2a
Snx5
Ranbp1
Mgme1
Sec23a
Nup107
Oacyl
Wdr45
Tbc1d10c
Ppp1ca
Dennd2c
Gm13290
Gm13289
Rgs3
Prorp
Pus10
Pcf11
Mrpl44
Diaph3
Ap1g1
Dhrs13
Efr3a
Hnrnpa1
Rnf8
Tgfbrap1
Hrh1
Ank3
AI597479
Rybp
Gli2
Arhgap29
Tmem138
Cyb561a3
Tmem109
Haus6
Clta
Clic4
Zdhhc23
Slc35e4
Plekhm3
Mrpl45
H2ac21
Tinagl1
Vax2
Smad7
Rpia
Rabl6
Nfkbil1
Etv6
Clasp1
Ccnj
Atp6v1g2
Cited4
Pdzrn3
Bnip3l
Tmem69
Gpbp1l1
Ankrd37
Kmt2d
Hmgn2
Tfpi
Kxd1
Bud13
4931408C20Rik
Ier5
Cfap20
Pdp2
Ttc21a
Trip12
Fbxo36
H4c18
Fryl
Zpbp
Rab15
Dad1
Abhd4
Maf
Sil1
H3c6
Ube3c
Snrnp35
Arap3
Zfp612
Lilra6
H2-Eb2
Syne3
Pcgf5
Tiam1
Ppil3
Nif3l1
Chchd5
Fam135a
Mat2a
Rab8a
Vps4b
Trappc5
Top3a
Smcr8
Dst
Bend6
Kctd9
Cdca2
Timm17a
Daam1
Rtn4
Acot7
Jag2
Gm13276
Mdk
Hoxa5
Gpr19
Mrs2
Rmi1
Hnrnpk
Psors1c2
Lair1
Rnf125
Ovol1
Nup54
Zfp947
Cntln
Rasd2
Tmem181a
Clns1a
Arhgef3
Vps36
Igsf9
Cyb5r1
Tsc22d1
Rnf185
Kin
Atp5c1
Piezo1
H4c14
Acvr2a
H1f2
Kbtbd7
Kmt2b
Zbtb24
Tead1
Kntc1
Tyw1
Sbds
Rab24
Prelid1
Grb2
Snai3
Ing4
Incenp
H4c8
Grcc10
Mpc1
Snx18
Enkd1
4933405L10Rik
Acp5
H2ac19
H2ac18
Adgrl1
Mat2b
Gpbp1
Usp40
Birc6
Ppp1r7
Pask
Nedd8
Gmpr2
Nfat5
Sspn
Hnrnpa0
Nfyb
Kat6a
Vmn2r4
Ctnna1
Zfp341
Hsp90aa1
Stat3
Vangl2
Tmem267
Stat1
Nabp1
Syp
Clcn4
Tlx2
Oasl1
Mob4
Prr14l
Pfdn4
Cyp24a1
Hsp90ab1
Tff3
Dmbx1
Papss1
Tas2r114
1810037I17Rik
Ski
Vmn1r15
Serpinb12
Wdr11
Ssbp2
Ppp2r3a
Xpnpep3
St13
Eif4b
Cdx1
Clca3b
H2-T3
Hoxb3
Vmn1r232
Supt6
Sdf2
Tbc1d14
Olfr849
Nepn
Cwh43
Bnip2
Dyrk1a
Phc2
Raet1e
Raet1a
Smco4
Zdhhc7
Malrd1
Kifc1
Slc35e2
Olfr1240
Spam1
Ttc28
Ltv1
Tal1
Tecrl
Sis
Elf3
Olfr702
Sult3a2
Uimc1
Lpar1
Ifna9
Ttc17
Prepl
Camkmt
Plekhf2
Hsph1
Sestd1
Mrps18c
Helq
Akt2
Bnip3
H2bc8
H2ac8
Olfr1054
Bcl7b
Vxn
Pth
Polr2a
Fcer1a
Olfr73
Lrig3
Hspa8
Kifc5b
Fam90a1b
Apoo
Vmn1r180
Hoxc6
E4f1
Cstdc6
Prdm14
Zcwpw2
Azi2
Uspl1
Prb1
Kcmf1
Asz1
Gtpbp2
Akr1c6
Fbxl2
Olfr178
Igf2
Ubb
St3gal4
Tfap2c
Il12rb2
Olfr688
Nr5a1
Miga1
Dlat
Cmklr1
Bahcc1
Tbx2
Gm5622
Fer
Clrn3
Ppil4
Themis
Fam53c
Vmn1r120
Tspan15
Serpinh1
Ostf1
Nmrk1
Arpp21
4930563M21Rik
Tfec
Cyp17a1
Taf4
Pradc1
Gad1
Cct7
Stk38l
Spink5
Slc22a14
Gpr34
Fzd9
Eml6
Cnep1r1
Tma7
Ppp1r2
Ccdc51
Foxi3
H2bc6
H1f4
Dnaja1
Tmbim7
Scyl1
Setx
Olfr992
Olfr281
Lrrc2
Olfr1026
Mrgpra4
Btn1a1
Slc5a12
Olfr1195
Olfr1029
Klrk1
Olfr983
Palm
Washc5
Rhot2
Nsmce2
Impa1
Cp
Zfp251
Slc10a2
Hnrnpa2b1
Cbx3
Ifitm1
Mettl15
Fus
Ubfd1
Pkdcc
Ears2
Popdc3
Cbx5
Calm1
Marchf7
Tesmin
Prdm2
Lce3b
Hspa1b
Vmn1r254
Vmn1r244
Vmn1r103
Tjp3
Tcaf1
Polk
Pofut1