ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11593785 | Trophoblast stem cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◢ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◣ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Hoxc5
Ifi205
Hoxd4
1700029F12Rik
Kmt2a
Rnase2b
Zc3hav1l
Trim2
Hoxb4
Zfp996
Cltc
Fzd10
Rnf214
Stra6l
Serpinb9e
Tfrc
Tbce
Dennd1b
Cdca7
Prl6a1
Ogdhl
Nck2
Gm29802
Upk1a
Stard10
Hoxb9
Reep3
Smarcad1
Fgd4
Rin2
Pccb
Cdk18
Mtf2
Fem1al
Zfp982
Gm829
Shmt1
Saa3
Gm13212
Utrn
Atp6ap1l
Ptprs
Slc40a1
Traf3ip2
Itprip
Dsc2
Mllt1
Atf7ip2
Rpe
Tnnt3
Upp1
Rgs5
Nlrc3
Klhl24
Snx24
Rnf128
Tbc1d2
D630023F18Rik
Pdik1l
Trp53bp2
Lrrn4
Smagp
Tmem11
Micu2
Nr6a1
Dao
Grip1
Xntrpc
Fbp2
Morc3
Tmod3
Sema4d
Rock2
Morc2a
Ift46
Slco1a6
Sh2d5
Exoc6
Pou5f1
Ffar4
Sgms1
Stag3
Gpc2
Dppa1
Krt9
Pth1r
Hoxc4
Mid1
Gcnt3
Olfr368
Mgat4b
Sdf4
B3galt6
Cst9
Supt6
Sdf2
Fasl
Tpd52
Otx1
Ogt
Sh2d4b
Dusp6
Zfp512b
Vps37c
Gsdma3
Cwh43
Eif2b5
Mmp27
Tsen54
Caskin2
Gpr4
Zyg11a
Arpc2
Serpinb9g
Tmem185b
Slc25a24
Tph1
Zfp280d
Scmh1
Wnt11
Ube2q1
Tes
Terf1
Tdrd7
Hdac2
Zfp568
Snx12
Zfp976
Zfp821
Ist1
Cd2bp2
Dnm2
Tkfc
Ddb1
Foxred2
Arg1
Gcnt2
Usp1
Sycn
Hsd17b2
Meis1
Zcwpw1
Bpifc
Osbpl9
Alpk3
Ints6
Zdhhc21
Amt
Trim44
Bmp4
Pygb
Eif5a2
Efna4
Neto2
Mcm3
Gid4
Gabpb2
Sdc4
Gm12789
Depdc7
Necap2
Thpo
Rrm2
Alyref2
Triml2
Atl3
1700067K01Rik
Hoxa4
Hes1
C130073F10Rik
Zfp91
Lpxn
Larp1
Gjb3
Ak1
Zfp975
Ehd4
Ccl20
Prnp
Prn
Tasor
Pogk
Vrk1
Tnfrsf9
Rab8a
Serf1
Abcg2
Tmem59
Ciart
Elf5
Lgsn
Mdfic
Kcnip2
Kcmf1
Ptk2
Tspan9
Deptor
Zscan20
Slc7a9
Epb41l5
Pitpnm2
Arhgap12
Cacnb2
Gse1
Trim55
Plaur
Lmo4
Tgif1
Olfr1342
Praf2
Eci3
Zfp28
Krtap2-4
Ehbp1l1
Mrps23
Baz1a
Knl1
Cavin3
Acp6
Vamp9
Cop1
Kbtbd6
Olfr52
A430005L14Rik
Trim29
Cdsn
Zfp977
Plin3
Per3
Ccdc166
H2az2
Cep97
Trmt44
Tex14
Atp5mpl
Tex19.1
Cpne3
Foxo1
Oas3
Zfp408
Ccdc33
Chac2
Taf5
Usf3
Bid
Ubxn2a
Asb8
Mgat4c
Gsto1
Vav3
E2f6
Fem1a
Mcrip1
Abcf3
Fhit
Ano8
Specc1
Cd38
Tdrkh
Cd47
Sumo1
Cc2d1a
4930432K21Rik
Sae1
Sspn
Eif2ak4
Supt7l
Slc4a1ap
Cmc1
Rbm47
Rasgrp4
Agfg1
Cyp2g1
Arhgap29
Gtf3c6
Nr1h3
Hdgf
Tafa3
Plin2
Mief2
Flii
Cwc22
Pcyox1l
Zmynd8
Sestd1
Cysltr1
Cbx5
Rabep2
Hacd2
Trim6
Tti2
Abhd17a
Dapk3
Iftap
Art5
Ccne2
Ankrd37
Tesmin
Prdm2
Ttc5
Pcbp4
AW549877
Zfp984
Acot11
Rnf157
Uqcc2
Ldb1
Zdhhc23
Dmtn
Plekhg3
Cited4
Dpysl2
Rbm25
Slc28a3
Gnas
Mga
Syt8
Relch
Agpat1
Usp38
Sptbn1
Zcchc7
Cdkn2aipnl
Maf
Calu
Mfge8
Grpel2
Cdkl3
Nrde2
Nes
Pcnx3
Map3k11
Arhgap32
Dlst
Eif3f
Tmcc1
Etv2
Mllt6
Ly6c1
Mvd
Hoxd3
Slc45a3
Eomes
Hbp1
Trip4
Csnk1g1
Ak2
Myo18a
Agrp
Tmem40
Herpud2
Nuak2
Rdm1
Lcmt2
Adal
Ttll11
Cldn4
Exosc10
Bin1
Wsb2
H4f16
Stx4a
Nup107
Mgat5
Noct
Dyrk3
Ascc1
Dennd2c
Smim40
Anapc11
Alyref
Ppat
Pus3
Ddx25
Insl3
Slco2b1
Chdh
Hoxa7
Zkscan5
Prim1
Rnf130
Fam107a
Tufm
Smad6
Acp5
Fbxl5
Ifnz
Tcea3
Rps6ka2
Olfr222
Rbbp8nl
1700008O03Rik
Znrf1
Epcam
Vcl
Nabp1
Prkd1
Ltbr
Luzp1
Tmem144
Syce2
Gypa
Gchfr
Rpp25
Eid2b
Slc20a1
Asap2
Sgo1
P2rx4
Phlpp2
Shroom3
Dcun1d1
Pdxp
Fzd3
Hook1
D630045J12Rik
Zfp78
Psap
Duoxa2
Duox2
Nfkb1
Rangap1
Sfi1
Ccdc90b
Tlr4
Chst2
Gm11545
Nin
Spop
Nvl
F2r
Tdrd1
Ezh2
Pcsk1n
Tfpi
Atg10
Cecr2
Nppb
Brf2
AU018091
Tjp2
Klf16
Tpd52l2
Morc1
Srf
Synb
Madcam1
Jag2
Wfdc2
Cacna1h
Lama3
Aip
Zbtb39
E2f4
Zfp947
Ttc32
Dusp23
Oacyl
Arhgef2
Dag1
Dnajb1
Acot7
Pcnx4
Sfn
Tpbg
Rmi1
Hnrnpk
Pcbp2
Vwa5a
Dynll1
Triobp
Wiz
Plekhm1
Metap1
Kap
Itgb2
Tbx3
Cdc42ep4
Dph5
Fancd2os
Ptpdc1
Zfp524
Fiz1
Aven
Nae1
Car7
Cradd
Sec23a
Niban1
Mr1
Nlrx1
Tinagl1
Arf6
Dhrs13
Mlana
Sumf1
Nptx2
Efr3a
Slf1
Erlin1
Epb41
Depp1
2210408I21Rik
Mat2a
B9d1
Commd1
Zfp148
Camk1d
Cutc
Cox15
Hdac7
Rrn3
Slc35f5
Eapp
Hibadh
Pih1d1
Plet1
Mageb16
Plag1
Chchd7
Nmi
Zfp385b
Vax2
Kbtbd7
Tcp11l1
Mkx
Lipe
Glipr1
Cops7a
Cdv3
Arap2
Ifitm1
Fam107b
Tyw1
Aox1
Echdc3
Pou2f1
Sbds
Nans
Fbxo15
Sugt1
4931408C20Rik
Jmjd1c
Tssk6
Ndufa13
Rnf125
Ivns1abp
Syne3
Trank1
Rab42
Erbb3
Polr3b
Fryl
Hmgn2
H4c11
Kmt5c
Timp2
Cluap1
1700037C18Rik
Tmem252
Scrn2
Ercc6
Cabcoco1
Rpl37a
Msantd3
Swsap1
Speg
Taf15
Cntln
Atp1a1
Cnih3
Pdp2
Gm13285
Retreg2
Cnppd1
Gm13290
Gm13289
Adgrl1
Sertad2
Slc25a53
Urgcp
Tatdn2
Pira7
Pira6
Pira4
Pira11
Gm14548
Gm13275
Gm13276
Rasd2
Vmn1r213
Radil
Hdgfl3
Sparc
Zpbp
Prkar2a
Otub1
Tmem109
Mpp4
Dux
Rnf8
Zfp692
Cmss1
Uggt1
Kctd5
Adnp
Pdcd6
Smad7
Ccdc107
Dusp2
Gm973
Prkag2
Olfr298
Gm3411
Nfat5
Hnrnpa0
Nfyb
Kat6a
Vmn2r4
Ctnna1
Zfp341
Hsp90aa1
Stat3
Vangl2
Hspe1
Hspd1
Tmem267
Stat1
Syp
Clcn4
Tlx2
Oasl1
Mob4
Vil1
Prr14l
Pfdn4
Cyp24a1
Hsp90ab1
Tff3
Dmbx1
Tmem69
Gpbp1l1
Papss1
Tas2r114
1810037I17Rik
Ski
Vmn1r15
Raver1
Serpinb12
Wdr11
Ssbp2
Ppp2r3a
Xpnpep3
St13
Eif4b
Cdx1
Clca3b
H2-T3
Rtn4
Hoxb3
Vmn1r232
Tbc1d14
Prl7d1
Olfr849
Nepn
Bnip2
Dyrk1a
Phc2
Raet1e
Raet1a
Smco4
H3c6
Zdhhc7
Malrd1
Kifc1
Slc35e2
Olfr1240
Mepce
Spam1
Ttc28
Ltv1
Tal1
Tecrl
H3c15
H3c14
Sis
Elf3
Ddx5
Cep95
Olfr702
Sult3a2
Poldip3
Uimc1
Lpar1
Ifna9
Zfp523
Phf11d
Ttc17
Prepl
Camkmt
Plekhf2
Hsph1
Mrps18c
Helq
Sil1
Akt2
Ccdc194
Bnip3
H2ac19
H2ac18
H2bc8
H2ac8
Olfr1054
Bcl7b
Vxn
Pth
Polr2a
Fcer1a
Olfr73
Lrig3
Hspa8
Kifc5b
Fam90a1b
Apoo
Vmn1r180
Hoxc6
E4f1
Cstdc6
Prdm14
Zfp518b
Zcwpw2
Azi2
Uspl1
Prb1
Asz1
Gtpbp2
Akr1c6
Fbxl2
Fam135a
Nudcd3
Olfr178
Mta2
Vps36
Igf2
Eloc
Ubb
St3gal4
Amd2
Amd1
Tfap2c
Il12rb2
Olfr688
Nr5a1
Miga1
Dlat
Cmklr1
Bahcc1
Tbx2
Gm5622
Fer
Setdb1
Clrn3
Ppil4
Themis
Fam53c
Vmn1r120
Tspan15
Serpinh1
Ostf1
Nmrk1
Arpp21
4930563M21Rik
Utp15
Ankra2
Lpp
Tfec
Cyp17a1
Taf4
Pradc1
Gad1
Cct7
Ccdc120
Stk38l
Spink5
Slc22a14
Mon1b
Gpr34
Fzd9
Eml6
Cnep1r1
Tma7
Ppp1r2
Ccdc51
Foxi3
H2bc6
H1f4
Rcan1
Dnaja1
Tmbim7
1110002E22Rik
Scyl1
Setx
Olfr992
Olfr281
Lrrc2
H4c18
Lin28a
Kctd9
Cdca2
Olfr1026
Mrgpra4
Zfp87
Btn1a1
Bhmg1
Abca8b
Slc5a12
Olfr1195
Olfr1029
Klrk1
Tceanc2
Olfr983
Palm
Washc5
Rhot2
Nsmce2
Impa1
Cp
Zfp251
Slc10a2
Hnrnpa2b1
Cbx3
0610009B22Rik
Atp5l
Mettl15
Fus
Ubfd1
Tsc22d1
Pkdcc
Ears2
Popdc3
Calm1
Marchf7
Slc7a1
Lce3b
Hspa1b
Ctla2b
Vmn1r254
Vmn1r244
Vmn1r103
Tjp3
Tcaf1
Polk
Pofut1
Plagl2
Pip5k1c
Olfr194
Muc3
Kir3dl2
Chrnb3
Cert1
Mnd1
Cd86
Rps29
H1f2
Scaper
Opcml
Csrnp2
Ccpg1os
Ccpg1
Pip4k2b
Paics
Mpnd
Capns1
Aig1
Stk25
Gtf2a1
Gm8978
Actb
Vmn2r2
Steap3
Slc7a4
Rfxank
Pttg1
Mtap
Lingo2
Krtap27-1
Kat8
Gm45929
Epha4
Acoxl
Tlx3
Srsf11
Rhox4g
Prkra
Olfr898
Ndufa12
Ppp2r5a
Ndst1
Gucy2c
Zfp663
Speer4f2
Rnaset2b
Rnaset2a
Klra7
Yy1
Shisa3
Pik3r2
Olfr815
Aldh1a2
Tent5d
Ncoa7
2610002M06Rik
Tmem245
Stip1
Slc41a3
Mettl1
Eef1akmt3
Adipor2
Vmn1r151
Scd1
Prss38
Paqr3
Mink1
Crb1
1700019D03Rik
Etfrf1
Casc1
Plau
Gm4791
Rita1
Pcif1
Nlrp4a
Ddx54
Tnfsf13b
Rnpep
Zfp281
Trmt61a
Olfr1453
Olfr1193
Vmn2r111
Rsrp1
Olfr655
Napepld
Chordc1
Ube2b
Prss30
Nanp
Magohb
Tomm7
Fubp3
Stag1
Pm20d1
Ostm1
Chmp3
AF366264
Kdm3a
Epc2
Carf
Vmn1r91
Snx15
Ppig
Pgam1
Olfr1220
Olfr1047
Nup43
Nid2
Kcnk2
Gm8126
Coq3
Usp47
St6galnac6
Klra1
Dph3
Srsf3
Smarcd2
Lrrc19
Ikzf3
H3c2
Grhl2
Dnajb9
Adora1
Zfp689
Tnrc18
Mrpl11
Hnf1b
Gm3776
Eif1ad
Banf1
Aasdh
Kif2a
Gstz1
Actrt3
Rilp
Pou1f1
Extl3
Btbd8
Vipas39
St3gal2
Pdgfra
Cct8