ChIP-Atlas: Target genes

Potential target genes for Rai1

Query protein: Rai1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1745539 | Cortex
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rai1's Target genes

◢ Rai1: Average

◢ SRX1745538: Cortex

◣ SRX1745539: Cortex

◢ SRX8694178: Embryonic brains

◢ SRX8694179: Embryonic brains

◢ SRX8694180: Embryonic brains

◢ SRX8694181: Embryonic brains

◢ SRX8694182: Embryonic brains

◢ SRX8694183: Embryonic brains

◢ Rai1: STRING

Cldn34d
Twist2
Tex33
Itgal
Greb1
Cwc22
Npm2
Nkx2-6
Ccna2
Plekhm2
E030030I06Rik
Atp10b
Ankrd35
Axin2
Man1a2
Olfr394
Txndc11
Lum
1700016C15Rik
Trarg1
Olfr1189
Mdfic
Stat6
Dnajb13
Swsap1
Wfdc13
Spint4
9430069I07Rik
Hbb-bs
Hbb-b1
Hbb-bh2
Olfr380
Trdn
Robo2
Pkia
Cd44
Gm5591
Vmn2r105
Frmpd1
Tdrd7
Slc26a4
Olfr449
Ube2i
Agtr1a
Irf8
Atxn7l3b
Rnf135
Sult1e1
Thrap3
Crebbp
Pld5
Fcgbp
Pcbp2
Hbb-bt
Hbb-b2
Tmem236
Alox8
Cd86
Mrpl48
Gm3376
Rbm25
Fam76a
Ftsj1
Ppp4r2
Olfr806
Ccr6
Odf2l
1110004F10Rik
Klk12
Pth2r
Psg23
St6gal1
Esp34
Fam161a
Eif4h
Fbxo42
Atp6v1g1
Depdc1b
Folr2
Tardbp
Ranbp2
Gm39773
Olfr464
Srsf11
Lrrc40
Dbh
Npas4
Trdmt1
Hdhd2
1700093K21Rik
Faap20
Ric8b
Prpf39
Rbp2
Atxn2
Wdr41
Myl4
Cdc27
Nrf1
Sharpin
Maf1
Gm35339
Cyc1
Birc3
Rlbp1
Fanci
Zfp112
Rcn2
Cnr1
Mkln1
Gpc6
Ube2l3
Rimbp3
Orc4
Mbd5
Rab2a
Gsg1l2
Glp2r
Sdhaf2
Cpsf7
Ccdc62
Dyrk1a
Ctxn3
Olfr1047
Olfr1046
Zdhhc17
Sf1
Trim71
Hnrnph1
Klhl9
Il1r1
Prcc
Atg4c
Psmd12
Pitpnc1
Mki67
Pura
Vcp
Cnbp
Pebp1
Rbm12b1
Slc39a1
Crtc2
Aadacl4fm2
Tmprss5
Mrpl58
Ogfr
Col9a3
Mrgbp
Ghitm
Hps6
Armh3
Olfr212
Mavs
Abca3
Abca17
Gnat1
Scfd2
Fip1l1
Psph
Cct6a
Slc36a2
Olfr20
Mapk8ip3
Setmar
Cpne4
Dpys
Usp14
Psmd14
Tbc1d32
Tcea1
Copb1
Olfr1051
Mfn2
Glra1
Arsg
Drd3
Wnt1
Dhx30
Tas2r120
Endov
Gse1
Olfr282
Lin7a
Kat7
Asb12
Rmi1
Hnrnpk
Dnm3
Rbm39
Skp1
Cma2
Has3
Accsl
Zdhhc1
Iqub
Col8a2
Sun1
Casd1
Smarce1
Glg1
Snrpd1
Esco1
Rack1
Taf8
Ccnd3
Leng8
Spock2
Enpp2
Olfr686
A530032D15Rik
Rnf14
Ubqln5
Ubqln3
Hectd1
Fbxw4
Utp11
Fhl3
Trp53inp2
Elavl1
Atp5g2
Alox5ap
Abhd6
Acot5
Dnmt3a
Wnt8b
B3galnt1
Olfr1303
Eif2s2
Sufu
Actr1a
Mapkapk3
Cish
Kdm3b
Slc25a36
Napepld
Nanos1
Fancd2os
Brk1
Gimap5
Gimap1
Speer4f1
Nupl2
Tmx4
Fam98b
C4bp
Mx1
Olfr741
Hnrnpm
Cd81
Pdcd6ip
Slfnl1
Snx4
Fam120b
Gm5458
Nedd4l
Ythdf2
Nbr1
Brca1
Zfp12
Spdye4a
Rps15
Apc2
Pskh1
Nrn1l
Smndc1
Nsd2
Rpgrip1l
Fto
Rbm7
Gm5617
Tmem125
Dele1
Btnl1
Uqcrc2
Tmem67
Rbm12b2
Dap
Rraga
Rab5b
Cdk2
Scamp2
Mpi
Pde4d
A2ml1
Cyth3
Rab11b
Tmem225
Magi3
Eri3
Trpm2
Cfap410
Il2ra
Galnt11
Ccser2
Glo1
Syde1
Lcn12
Fbxw5
C8g
Eef1a1
Chn1
Rbbp6
Txnl4a
Rbfa
Gm16286
Golga4
Exo1
Cibar1
Mmrn1
Mrps28
Dusp11
Ifna1
Psmd7
Dis3l
Pramel1
Rtcb
Tia1
Pcyox1
Hsf1
Bop1
Unc45b
Ankrd53
Rnf138
Zfp239
Ambra1
Sf3a1
Ccdc157
Morc1
Psma2
Mrpl32
5031439G07Rik
Gprc5a
Olfr1214
Olfr1213
Psmc6
Zmat5
Uqcr10
Clk3
Rdh14
Ttc32
Krt84
Pank3
Tmem17
Tnip1
Tax1bp1
Ly75
Srp54c
Srp54b
Srp54a
Actr8
Gosr1
Sem1
Smu1
Rab18
Eef1akmt2
Abraxas2
Lmbr1
Rnf215
Rasgrp3
Polr2m
Dhx15
BC034090
Cdkal1
Slc25a3
Atp6v0a1
Plpp7
Nek4
Itih1
Rgs14
Lman2
Ube2e1
Fa2h
Aqp7
Fbxl13
Armc10
Dnm1l
Exoc2
Tor1aip2
Tor1aip1
Mapre2
Zfp963
Ubr3
Ipo7
Smarcad1
0610009B22Rik
Tmem141
Fcna
Ccdc183
Prox2
Dlst
Pacc1
Nenf
Stambp
Pdgfra
Rtf1
H3f3c
Hps5
Gtf2h1
Prmt6
Pan3
Actr2
Syn2
Eaf2
Usp5
Cdca3
Iqcb1
Fam168a
Ice2
Uqcrfs1
Zfp62
Tmem88
Naa38
Cyb5d1
Inpp5b
Oxct2a
Hnrnpul1
Acot11
Tnfaip8l1
Cd36
Rbmy
Gm4064
Gm21708
Gm21704
Gm21693
Gm21677
Gm10352
Gm10256
Mettl25
Ccdc59
Mtpn
Smim13
Fhit
Pex7
Hmgn1
Man2a1
Dtwd2
Usp47
Napb
Cstl1
Fbxo41
Oxsm
Ngly1
Gdf3
Dppa3
Oxnad1
Dph3
Thumpd1
Gnl2
2610044O15Rik8
Pink1
Ibtk
Rps29
Lrr1
Zfp26
Tekt3
Slc39a4
Cpsf1
Zfp866
Map3k3
Nudt3
Ythdc1
Slc5a7
S100a13
S100a1
Chtop
Rai1
Rpl10l
Mlf2
Amz2
Hnrnpll
Spag6
Hps3
Zfp438
Hsd17b12
Kcnj16
Kcne4
Prl7c1
Akr1c18
Dennd6a
Zc3h18
Cacng2
Ttll11
Tcp1
Pnldc1
Mrpl18
Zfpl1
Vps51
Tmem262
Tm7sf2
Cdca5
Clpx
Cwh43
Tlk2
Zscan25
Rabl6
Scaf8
Anapc10
Abce1
Ccnt1
4930415O20Rik
Tm9sf2
Ptpn23
Phf7
Bap1
Pef1
Arf2
Slc25a27
Cyp39a1
Jagn1
Cidec
Ptbp2
Phactr2
Gpd1
Cox14
Trim44
Vapb
Ttc39b
Wdr33
Ino80d
Nup214
Zc3h4
Pgap2
Nup98
AW549877
Supt6
Sdf2
A2m
Ppp5c
Pcbp1
Cyp3a59
Vamp3
Zdhhc13
Magoh
Czib
Tspyl1
Tmem43
Chchd4
Kiz
Slc10a7
Rbmxl1
Ncl
Elp1
Abitram
Lpo
Zbtb21
Defb23
Akap8l
Vps37a
Cnot7
Lrrc57
Haus2
Slf2
Atp5l
D2hgdh
Vmn1r60
Btbd9
Cd300e
Ttc7b
Vdac1
Stpg1
Nipal3
Eif3e
Olfr822
Kdm2b
Helz
Tbc1d12
Tas2r134
Luc7l
Fam234a
Mff
Gpd2
Zkscan1
Slc36a1
Lig3
Cul5
Cul1
Ptrhd1
Cenpo
Wdr34
Rpl17
Ddx23
Narf
Cybc1
Dus4l
Cog5
Nxf1
Zfp786
Zfp398
Vwa7
Vars
D17H6S56E-5
Pole3
Gga2
Alad
4933430I17Rik
Ankrd54
Lnpk
Rp9
Bbs9
Napa
Hnrnpu
Micos10
Rptor
Hnrnpa0
Zfp871
Scarb2
Capsl
Ammecr1l
Sltm
Ssr3
Serinc1
Tnrc6a
Trem3
Clcc1
Ttll8
Rad23b
Opa1
Itpa
Ddrgk1
Rfc4
Sema4d
Eif2ak4
Dnajc1
Sspn
Sike1
Farp2
Dnajc25
Ankle2
Rplp0
Gcn1
Aatf
Olfr1457
Zc3h12c
Zbp1
Zfp386
Clk1
Cbr4
Ints6
Tal1
Hacd3
Arih1
Atp5g3
Itgb1
Crppa
Zkscan3
Iapp
Lpin1
Zbtb12
Ehmt2
Psma3
Spg20
Cbfa2t2
Rgs5
Mtres1
Iba57
Cldn18
Timd4
Magohb
Igfbp2
Ndufb2
Srebf1
Usp24
Rps13
1810013L24Rik
Tomm70a
Ttc9b
Oxa1l
Rhbdd1
Zfp672
Sh3bp5l
Trmt1
Nacc1
Pdia3
Catsper2
Uqcrh
Lrrc41
2700097O09Rik
Lyrm1
Dcun1d3
Kpna6
Prnp
Prn
Nup205
Abcd3
Wdr77
Atp5pb
Nae1
Car7
Zfp746
Ccdc9
Rflna
Pkd1
Hipk3
Naa30
Snrpe
Hmx2
Bub3
Arih2
Msra
Mansc4
Klhl42
Phrf1
Bmt2
Ift52
Malsu1
Fgd3
Tgfbrap1
AI597479
Eif4a2
Katnal1
Capn2
Senp8
Myo9a
Arf4
Smg9
Edf1
Usp40
Stx18
Qtrt2
Ccdc191
Tmem231
Gabarapl2
Psmd2
Snx2
Ltk
Zfp263
Inpp1
Hexim2
Sel1l
Rsl1d1
Hsf3
Heph
Sh3kbp1
Ndel1
Sertad2
Atp6v1h
Dennd10
Baz2a
Atp5b
Wbp11
Smco3
BC049715
Urgcp
Ubxn7
Zbtb42
Akt1
Adamts15
Eral1
Saraf
Leprotl1
Herpud2
Zfp1
Capn7
Osgin2
Rpl27a
Ifi47
Setd7
Zbtb8os
Rbbp4
Eif4g2
Zfp319
Usb1
Gpam
H4c2
H4c1
H3c2
H3c1
H2ac4
H1f1
Tet3
Rexo1
Cers2
Anxa9
Pja2
Amfr
Rpl19
Cacnb1
Hspe1
Hspd1
Thap3
Phf13
Sf3b1
Dyrk1b
Fbl
Ccny
Ywhab
Fam174a
Rhot1
Vps35
P2rx2
Pdhb
Tmem115
Zdhhc21
Arl10
4833439L19Rik
Sugp1
Mau2
Sf3a2
Plekhj1
Amh
Wfdc1
Setd5
Nfkbia
Ccnt2
Sqor
Nprl2
Cyb561d2
Phc3
Sec13
Ahctf1
Krtap5-3
Mmadhc
Prpf8
Ppp1r9a
Tmem144
Lpcat1
Trim27
Ppp3cb
Srsf1
Senp6
Ruvbl1
Tbce
Psma1
Mios
Ssrp1
P2rx3
Zfp637
Nckap1
Tbc1d19
Nrg1
Cdip1
Mettl9
Mboat1
Ccnl1
Marchf5
Cpeb3
Cand1
Relt
Strap
Uhrf2
9430015G10Rik
Twf1
Ldah
Bpnt2
Fbxo7
Pds5b
Lonp2
Tnks2
Scaf4
Ivd
Zfp607b
Map3k10
Prkacb
Med15
Atp8a2
Ypel5
Spink10
Pdpr
Fbxo38
Ppp6r2
Rab7
Tada2a
Inafm2
Lipm
Dzip3
Cip2a
Cct2
Gm10509
Usp22
Pik3cb
Cct5
Atpsckmt
Pus1
Ep400
Tmem135
Pafah1b1
1700066M21Rik
Rnaseh2c
Cox5a
Kat5
Fbxo4
Slc25a4
Zfp775
Repin1
Gm5111
Hddc2
Hs3st1
Slc30a5
Gm3448
Gm3417
9030025P20Rik
Pdcd6
Kdm4c
Ccdc90b
Cnih1
Zfp551
Sec61a2
Zfp638
Rsbn1
Troap
Ddx50
Ehmt1
Ntmt1
1700001O22Rik
Spag9
Smarca4
Dcp1a
Rcc1l
Gtf2ird2
Arl5a
Rpl30
Erich5
Opa3
Ociad1
Syngr1
Rpl3
Tssk2
Tssk1
Dgcr2
Prkn
Pacrg
Slc23a3
Retreg2
Cnppd1
Rnf10
Coq5
Frmd5
Zmynd11
Tnfrsf13c
Efr3a
Ift22
Cbx1
Shisa8
Afg3l2
Rwdd2b
Ltn1
Mcl1
Mtdh
Rab11fip5
Socs6
Gpatch8
Selenok
Gcc1
Fscn3
Arf5
Sik3
Pafah1b2
Rnf7
Oma1
Mat2b
Midn
Cbarp
Atp5d
Smarcb1
Kifbp
Arl14ep
Fam32a
Cib3
Smim7
Map1lc3a
Scyl1
C87436
Ola1
Exoc6b
Arhgap39
Trappc6b
Pnn
Mfsd12
Hmg20b
4930404N11Rik
Zscan22
Ykt6
Gck
Npdc1
Entpd2
Rc3h1
Nudt19
Zfp513
Snx17
Eif2b4
Sec16a
Sap130
Nudcd1
Eny2
H2aj
H4f16
Pgap4
Rbm27
Cds2
Rbm22
Maml1
Msmo1
Rabggtb
Sult4a1
Amn1
Msh4
Zbtb44
Lcmt2
Adal