ChIP-Atlas: Target genes

Potential target genes for Aire

Query protein: Aire
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2437689 | Thymus
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Aire's Target genes

◢ Aire: Average

◢ SRX9940416: Thymic epithelial cells

◢ SRX9940417: Thymic epithelial cells

◢ SRX9940418: Thymic epithelial cells

◢ SRX9940419: Thymic epithelial cells

◢ SRX9940420: Thymic epithelial cells

◢ SRX9940421: Thymic epithelial cells

◢ SRX9940422: Thymic epithelial cells

◢ SRX9940423: Thymic epithelial cells

◣ SRX2437689: Thymus

◢ SRX2437690: Thymus

◢ Aire: STRING

Arl4d
Eapp
Taf12
Gmeb1
Zc3h12d
Rdm1
Calcb
Pole3
Alad
4933430I17Rik
Tex14
Utp14b
Acsl3
Chmp7
Cldn34d
Gpn3
Fam216a
Slc12a4
Timm13
Lmnb2
Tnfrsf8
Faf1
Cdkn2c
Gtf3c5
Slc20a1
Cdc42ep2
Xpnpep3
St13
Dnajb7
Gm4791
Pmm1
Cops8
Ier3
Flot1
Dnajc16
Casp9
Kif2c
Rbbp8
Tnfaip3
Tmem107
Sprr2a3
Nme1
Slc9a9
Skint9
Atp13a2
Tbck
Aimp1
Prrt2
Pagr1a
Maz
Isg20
Otud6b
Gm10634
Stat1
Slc25a12
Arhgap11a
Il15
Gm2396
Eif3d
Arid3a
Trrap
Tmem130
Dhx8
Psmd1
Supv3l1
Med6
Dhx16
Serpina3j
Gimap1
Alyref2
Sprr2a2
Sprr2a1
Slc35b1
Clptm1
Apoc2
Ppfibp2
Rhbdl2
U2surp
Tbxa2r
Cactin
Rbbp5
Ndufa9
Akap3
Slc5a9
Get1
Taf9
Rad17
Ak6
Htra2
Dqx1
Aup1
Poc5
Sec61b
Alg2
Slc25a32
Dcaf13
Pes1
Gm7244
Vta1
Fsd2
Med26
Olfr1416
Ndufa10
Ccnt1
4930415O20Rik
Kcnn1
Ccdc124
Cyba
Mvd
Erlin1
Cradd
Nuf2
Rnf7
Gbp10
Clec2g
Snn
Srp54c
Cdk11b
Gm3448
Gm3417
9030025P20Rik
Stxbp6
Klhl18
Kif9
Zfp740
Csad
Snrpc
Hivep1
Psmc1
Fbxw7
Mis18bp1
Tmprss4
BC049352
Slc18b1
Rps12
Hjurp
A730008H23Rik
Opa1
Fitm2
Tnfrsf13c
Pdap1
Bud31
Birc3
Snx5
Mgme1
Bod1l
Gmfb
Cgrrf1
Angpt1
Ifnar1
Farsb
Zfp445
Gtf3c6
LOC666331
Gm11634
Pop7
Ceacam16
Rer1
Morn1
Unkl
Percc1
BC003965
Sirt6
Ankrd24
Gramd4
Spa17
Siae
Sema3f
Tram1
Tomt
Lamtor1
Anapc15
Surf6
Rpl7a
Med22
Esrp2
Grap
Srp54b
Srp54a
Gtf2b
Mtrex
Dhx29
Sh2d4b
Nfib
B9d1
Spz1
Bmf
Uqcc3
Ubxn1
Pde1c
Stat4
Sfswap
Arid3b
Mrpl45
Skil
Cysltr2
Ppp1r15b
Ccnt2
Sirt4
Ahnak
Usp4
Gpx1
Dok3
Ddx41
Eif4e
Gtf3c2
Tbata
Rrh
Gar1
Cfi
Krt222
Mknk1
Trappc8
Tcte3
Ermard
Poldip3
Eif2s1
Atp6v1d
Rnf225
Ubr4
Hspb2
Dixdc1
Cryab
2310030G06Rik
Fam209
Gas7
Cherp
Rab15
Nat10
E230025N22Rik
Eef1g
Ncoa7
Ndufaf5
Esf1
Serinc3
Sugp2
Armc6
Tifa
Alpk1
Slc39a14
Mtarc1
Nr1d1
Tapbpl
Cd27
Fdxacb1
1110032A03Rik
Dock10
Tgfbr3l
Map2k7
Skint2
Polr2e
Ccdc126
Cfap298
Cog7
Atg5
Ufl1
Sspn
Hmgxb3
Pak1ip1
Ptp4a2
Ociad1
Srrm2
Spink4
Sart3
Iscu
Kxd1
Fkbp8
Dennd11
Tmtc3
Cep290
Pds5b
N4bp2l2
Amz2
Clec12a
Epg5
Slc13a1
Il1rl2
Rtcb
Gm11213
Gtf2a1
Dph5
Papss1
Zp2
Snrpn
Spef1l
Txndc11
Fam177a2
Fam177a
Rd3
Gm20346
Hes6
Hspb3
Tnn
Pmp2
Rpl32
Kbtbd3
Hps5
Gtf2h1
Clptm1l
Rab5if
Smg9
Med18
Kpna1
Gm3435
Pum3
Atr
1700065D16Rik
Gspt1
Fam104a
D11Wsu47e
Ints4
Pyroxd1
Sdad1
Cxcl11
Cxcl10
Ptprq
Med17
Ttc32
Ap4e1
Prokr2
Gfra4
Fmo3
Dennd4a
Elf3
Phf14
Ndufa4
Lig4
Abhd13
Lsm6
Hspa9
Zfpl1
Vps51
Tmem262
Gm550
Cdca5
Nfam1
Haus6
Rab27a
Ufm1
Rad9b
Thsd4
Pabpc4
Gltpd2
Vmo1
Tm4sf5
Nup133
Slc33a1
Vps26c
Slamf6
Stxbp3
Eif4b
Syngr1
Rpl3
Map3k7
Smn1
Krtap7-1
Marcksl1
Rptor
Ttc39d
Cct8
Prpf19
Osbpl3
Endov
Wdtc1
Nek11
Aste1
Tead3
Mrs2
Fbxw11
Chpf2
Abcf2
Cfap20
Ankrd22
Rad51ap1
D6Wsu163e
Sephs2
Pold3
Mbd1
Mrpl11
Naa25
Pofut1
Plagl2
Chordc1
Myo18a
Tvp23a
Lypla2
Gale
Slc6a20a
Stat3
Fntb
Tubb1
Ctsz
Sipa1l3
Zfp974
Upf2
Dhtkd1
Tars
Rdx
Pdcd4
Tyrobp
Nfkbid
Hcst
Setdb1
Tfg
Irgc1
Plscr5
Morc3
Polr3f
Dzank1
Atg16l1
Rhbdf2
Brpf1
Vmn1r2
Atf6
Txnl4b
Dhx38
Nup50
Tufm
Rhpn2
Lamtor5
Gm4925
Arl1
Lmna
Gypc
Etv6
Stam
Sertad4
Stk32c
Lrrc27
Fra10ac1
Nqo1
Clca3b
Dync1h1
Coa3
Cntd1
Hopx
Mep1b
Plb1
Osbpl7
Mrpl10
Lrrc46
Tsga10
Lipt1
Wdr55
Dnd1
Bcl3
Rhoc
Znhit6
Fmo5
Arl8b
Tmem134
Gpr152
Cabp4
Aip
Uvssa
Vmn1r3
Rbbp8nl
Tnfaip8l2
Tmod4
Scnm1
Lysmd1
Spats2l
Slc25a13
Chst15
Cltc
Klhl38
Commd1
Cct4
Zrsr1
Sirt1
Cd83
Synj2
Cox5a
Il10
Them4
Smoc2
Mknk2
Riok1
Cage1
Sqstm1
Ptp4a1
Ifnlr1
Trmt5
Slc38a6
Atxn2l
Daam1
Prss30
Tarbp2
Npff
Map3k12
Tmem167b
Dock2
Surf4
Stkld1
Tefm
Adap2
Birc2
Pcgf5
Hint3
Aebp2
Cmtm5
Erlin2
Mrps30
6330409D20Rik
Rps29
Lrr1
Frg1
Olfm4
Psmd3
Lipc
Nudt9
Akap10
Ppp2ca
Noc4l
Ddx51
Oxsr1
Mtf2
Ndufs4
Zmynd15
Blnk
Zmiz2
Emc7
Smc2
Zdhhc4
Napg
Scamp3
Fam189b
Trir
Tnpo2
Neurl1b
Kifc5b
Rasl10a
Gas2l1
Trim63
Tln1
Creb3
Tmem104
Nat9
Pus1
Ep400
Snapc2
Ctxn1
Pdcd1lg2
Esrp1
Nup85
Gm4841
Zbtb4
Slc35g3
Polr2a
Ncbp2
0610012G03Rik
Gtf2f2
Msra
Il18r1
Gosr2
Srd5a1
Nsun2
Sap30bp
Recql5
Ikzf5
Acadsb
Rhbdf1
Mpg
Pold1
Nr1h2
Cant1
C1qtnf1
Ifi211
Gm7932
Serp1
Eif2a
Srsf1
Mrpl48
Mcf2l
Atg10
Mob3a
Izumo4
Utp15
Ankra2
Gemin6
Sh3bp4
Snrnp25
Il9r
Tmed6
Pdf
Nip7
Cog8
Vdac2
Tyw5
Maip1
Zfp473
Vrk3
Slc38a2
Tmem128
Sys1
Mrpl54
Matk
Apba3
Synb
Slc25a37
Dkk4
Ppp1r1c
Fbxo7
Bpifc
Sf3b3
Cog4
Cfap45
Serpina3n
Mttp
Thap12
Krr1
Sde2
Spen
Rhobtb1
A930033H14Rik
Shfl
Ppan
Angptl6
Snrnp70
Kcna7
Ing4
Myog
Eif2s3x
Prkrip1
Acrbp
Ear10
Amn1
Get3
Rad52
Itgb8
Uchl5
Ro60
Csnk1g2
Zfp513
Snx17
Eif2b4
Naa80
Lsmem2
Ifrd2
Hyal3
Myt1
Psmb6
Gm40193
Muc13
Dnmt3b
Rhov
Zfp623
Zgrf1
Larp7
Hinfp
Saysd1
Wdr12
Carf
Lpcat2b
Btbd8
Zfp719
Slamf9
Igsf9
Zfp119a
Zfp318
Mtmr10
Hmga1b
Hmga1
Zfp148
Tmem39a
Ciao3
Vars
D17H6S56E-5
Rad50
Wbp1l
Zscan25
Bbs2
Crbn
Tmbim1
Gid8
Dido1
Slc25a33
Rsbn1l
Rps24
Polr3a
Mbd2
Il17c
Tbcb
Polr2i
Ovol3
F2rl1
Tab1
Grb2
Dars2
Slc6a7
Ndufc2
Etv1
Tspear
Gm19402
Cacybp
Sdhb
Suclg2
Sgms2
Fosb
Siglec1
Fan1
Josd1
Gtpbp1
Stk35
Ndufb5
Mrpl47
Ap5s1
Nsun7
Chd9
Rnf145
Aftph
Il2ra
Adam17
Myo1g
Cops7a
Rwdd1
Dcp1a
4931408C20Rik
Vps72
Pip5k1a
Angel2
Copg1
H2-Ea
Btnl2
Trim56
Synpo
Hadhb
Hadha
Tti2
Neurl4
Acap1
2810408A11Rik
Tmem250-ps
Carmil3
Coq7
Thumpd3
Grhl2
Borcs7
Rabif
Katna1
Med11
Ctdsp1
Tbce
Urgcp
Anapc4
Azin1
Nxpe4
Nol6
Plekhs1
Mdh1b
Fastkd2
Tm9sf2
Hcar2
Mtf1
Otulin
Sass6
Kbtbd7
Mfhas1
Hs6st1
Atp6v1h
Niban2
Asb8
Atf7ip
Tcf25
Pigr
Aaas
Tchp
Tprn
Tmem203
Ndor1
Mapkapk5
Rbm7
Gm5617
Rpl5
Exoc7
Ubox5
Fastkd5
Tmcc3
Zfp866
Cntn5
Trip11
Cdk5rap2
Pigbos1
Pigb
Pla2g3
Birc5
Krt79
Krt4
Tmed2
Rilpl1
Prdm4
Ascl4
Man1b1
Csk
Srr
Smg6
Ccdc88a
Kif3c
Crebl2
Gpr146
Zfp142
Bcs1l
Tcp1
Pnldc1
Mrpl18
Il12a
Il9
Atad3a
Olfr433
Olfr432
Ifi205
Mvk
Mmab
Dad1
Abhd4
B4galt5
Zfp707
Wdfy2
Tmcc1
Ahr
Lrit2
Rsbn1
Fam89a
Atp5l
Ift52
Htra4
Bst1
Wdr43
Rbm25
Rcc2
Olfr434
Fmn1
Polr3b
Gatb
Ttll5
Erg28
D7Ertd443e
Calm3
Rtf2
Cox7a2l
Snrpd1
Esco1
Nfxl1
Npas2
Spdye4b
Rbak
Fndc7
Pacsin2
Ap1g1
Cenps
Rnf6
Cdk8
Mtmr14
Pigz
Ddx18
Phf23
Gabarap
Dvl2
Nfkbiz
Pln
Slc3a2
Tdrd9
Atp5mpl
Tyw3
Cryz
Pstpip2
Tfpt
Prpf31
Tmpo
Syn2
Csnk1a1
Dync1i2
Timm21
Fbxo15
Zxdc
Pdcd2l
Hspa1l
Hspa1a
Fem1b
Lsm2
Arf4
Ovol1
Ap5b1
Tsfm
Cbx1
Ap2s1
Hpf1
Nudt5
Cdc123
B3gntl1
Safb2
Safb
Kcnh6
Shprh
Nbeal1
Fkbp9
Tnpo3
Scrib
Tmem229a
Isy1
Lamp1
Rnf185
Tfrc
Bdnf
C77080
Mettl22
Crlf3
Atad5
Glt28d2
Tasor2
Zfp433
Gm32687
Sectm1a
Rassf6
Usp48
Nlrp10
Eif3f
Emp3
Ccdc114
Fam135a
Eif1
Nfil3
C87436
Clasp1
Pigu
Triap1
Gatc
Cox6a1
Crybg3
Tubg1
Retreg3
Traf2
Edf1
Usp8
Tspan14
Ppip5k2
Gin1
Rps14
Creb1
Abcc4
Snip1
Dnali1
Ppp1cb
Mettl25
Ccdc59
Nfyc
Katnal1
Mefv
Ttc14
Dgat1
Tacc2
Scrt1
Klhdc8b
Ccdc71
Sez6l2
Asphd1
Mep1a
9130401M01Rik
Prpf38a
Orc1
Cenpu
Mex3c
Ube2q1
Chrnb2
Chd8
Nme6
Igf1
Phb
Epha2
Nol7
Abcb6
Lacc1
Ccdc122
Kcnj1
Rpl22l1
Prkab1
Pip4p1
Osgep
Apex1
Tssc4
Prodh
Golga7
Naa40
Tbkbp1
Tyw1
Sbds
Nfkbil1
Ddx39b
Atp6v1g2
Serpina3g
Rpl9
Lias
Cmss1
Slc26a8
Mapk14
Cnot10
Ndufs7
Irf2
Luc7l
Fam234a