ChIP-Atlas: Target genes

Potential target genes for Aire

Query protein: Aire
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9940416 | Thymic epithelial cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Aire's Target genes

◢ Aire: Average

◣ SRX9940416: Thymic epithelial cells

◢ SRX9940417: Thymic epithelial cells

◢ SRX9940418: Thymic epithelial cells

◢ SRX9940419: Thymic epithelial cells

◢ SRX9940420: Thymic epithelial cells

◢ SRX9940421: Thymic epithelial cells

◢ SRX9940422: Thymic epithelial cells

◢ SRX9940423: Thymic epithelial cells

◢ SRX2437689: Thymus

◢ SRX2437690: Thymus

◢ Aire: STRING

Txndc11
E030030I06Rik
Tmem125
Cxcl11
Cxcl10
Birc2
Tbata
Sspn
Birc3
Greb1
Nkx2-6
Cerk
Cdc42ep2
Aebp2
Stat1
Irf2
Tram1
Mob4
Marcksl1
Pdcd1lg2
Yif1b
Kcnk6
Mpp7
Nme1
Mrpl45
Pcgf5
Ccnt2
Psmc4
Dph5
Gm3448
Gm3417
Gm3435
Cyba
Pde1c
Rsbn1
Erbin
Smap1
LOC100861978
LOC100861969
Il11ra2
Gm2506
Gm2002
Gm13306
Gm13305
Ccl27b
Dennd4a
Akap10
Abhd6
Zfp148
Cltc
Asb8
Ubd
Spen
Rhbdl2
Rab33b
Pdcd4
Rer1
Morn1
Dock2
Tex14
Daam1
Dnmt3l
Aire
Gm7244
Bsdc1
Nfat5
Abhd16b
Gm525
Dnaic2
9030025P20Rik
Faf1
Cdkn2c
Snrpn
Relt
Mreg
Mtrex
Dhx29
Plb1
Clptm1l
Snn
Utp14b
Acsl3
Sephs2
Sema4c
Tvp23a
Fmn1
Tnfrsf8
Isg20
Lsm14a
Cdh23
Tm9sf2
Ier3
Flot1
Nostrin
Mllt10
Skida1
Sec31a
Yipf1
Dio1
Bach2
Vps26c
Bcl2a1c
Eif4b
Mapkapk5
Dcp1a
Plekha1
Gbp10
Tmem134
Gpr152
Cabp4
Aip
Kdm3a
Tcte3
Ermard
Ifnar1
Rbpj
Mtarc1
Sec24b
Rhbdd2
Ifi211
Fam107b
U2surp
Slc13a1
Cd163l1
Map3k7
Stat4
Csk
Map3k8
Ufsp1
Ache
Il15
Osbpl3
Chst8
Mphosph9
2810006K23Rik
Chmp7
Nudt9
Sh2d4b
Adam17
Nupl1
Thoc1
Fbrsl1
Exoc2
Tmem151b
Slc35b2
Slco5a1
Nfkbie
Gtf2a1
Gm51598
Gm2396
Atp13a2
Sde2
Dleu7
Gltpd2
Psmb6
Gm40193
Zfp213
Traf2
Edf1
Tmtc3
Cep290
Birc5
Cdc42bpb
Zup1
Smc6
Gen1
Ssbp4
Lrrc25
Cxxc5
Cd209a
Chordc1
Il4i1
Wdr31
Irf2bp2
Il11ra1
Ccl27a
Olfr1137
Zc3h15
Zfp36
Plekhg2
Liph
H2-Eb1
Srrm2
Il1rl2
Zfp62
Bcl2a1d
Ppp1r15b
Gm10634
Fabp4
Calcb
Krt18
Stxbp3
Trim65
Mrpl38
Tapbpl
Cd27
Gpr146
2300009A05Rik
Rel
Cldn34d
Arf4
Gramd1b
Gpihbp1
Ptgr2
Slc9a9
Ccnt1
4930415O20Rik
Aftph
Josd1
Gtpbp1
Birc6
Trappc8
Tcp1
Pnldc1
Mrpl18
Fas
Trim63
Ripply2
Ccdc88a
Nkap
Pmm1
Siglece
Ctu1
Cdcp1
Hes6
Ankrd33b
Sppl3
Rasl10a
Gas2l1
Tdp2
Acot13
Tpt1
Kcnh6
Pdlim3
Slc35e1
Mob3a
Izumo4
Fam89a
Gamt
Dazap1
Orai2
Cracd
Jund
Iqcn
Spef1l
Mmaa
Ubr4
Serinc3
Cysltr2
Mep1b
Akirin2
Rnf149
H2-Aa
Nfkbia
Lig4
Abhd13
Chd9
Mkrn2os
Slc33a1
Ube2n
Ppp1r1c
Ifit1bl2
Ifit1
Surf4
Stkld1
Foxp4
Arfgef1
Rps6kc1
Skil
Bmf
Strip2
Zc3h12d
Tnn
Sgpl1
Ppip5k2
Gin1
Mfhas1
Traf6
Cd2bp2
Pxt1
Kctd20
Spata1
Gng5
Htra2
Dqx1
Aup1
Naa30
Hipk3
Tmub1
Fastk
Agap3
Rbbp8
Fbxw7
9130401M01Rik
Tet1
Aars2
Tmf1
Eif4h
Sys1
Cnot8
Ints4
Krt79
Krt4
Rsbn1l
Abcc4
Wdr77
Atp5pb
Rac2
Mknk2
Ralb
Tmem104
Nat9
Ankrd22
Ccr4
Tefm
Adap2
Odc1
Ier5
Kif13b
Bod1l
Bst1
Nfkbiz
Exoc5
Ap5m1
Enpp4
Thap12
Snrpd1
Esco1
Naa80
Lsmem2
Ifrd2
Hyal3
Get4
Rab21
Nhlrc2
Dclre1a
Rrh
Gar1
Cfi
Ppp1cb
Prokr2
Rhbdf2
Snrnp25
Il9r
Ppip5k1
Ckmt1
Matr3
Cdkn2aipnl
Cradd
Mknk1
Zfp473
Vrk3
Traf3
Jmy
Kcnn1
Ccdc124
Slc25a32
Dcaf13
Zfp719
Smg9
Gpn3
Fam216a
Ubqln1
Tmem265
Tmem19
Grap
Nup50
Abr
Supv3l1
Tmcc3
Rassf6
Gtf3c5
Ppfibp2
Clec2g
Tmem175
Gak
Mvd
Pigz
Gadd45b
Rnf40
Ccdc189
Rexo4
Adamts13
1600014C10Rik
Eif4e
Ptp4a2
Htra4
Tbx15
Tifa
Alpk1
Rab15
Eif2s1
Atp6v1d
Kbtbd2
Stat5b
Arf6
Nup153
Tmie
Als2cl
Gimap1
Sppl2a
Eed
A130010J15Rik
Dnajc16
Casp9
Nr1d1
Mideas
Dnase1l3
Rad9b
Eif4a2
Zpr1
Bud13
Zfp428
Gbp8
Txnrd1
Eid3
Vta1
Rfesd
Ctcfl
Ubald1
Mgrn1
Arl4c
Ppp1r2
Plekha2
Otud6b
Etv6
Mtf2
Pex3
Adat2
Cd83
Mterf1a
Rad50
Anapc10
Abce1
1110051M20Rik
Timm44
Emsy
Csf2
Vmn1r66
Hmgxb3
Tubb1
Ctsz
Actr3
Dop1a
Ube2cbp
Sprr2a2
Sprr2a1
Slc6a7
Rubcn
Fyttd1
Arhgap30
Slc17a5
Trmt2a
Ranbp1
Usp12
Srsf9
Gna15
Snrpc
Dennd11
Rps3a1
Knop1
Iqck
Surf6
Rpl7a
Med22
Sh3bp4
Crbn
H2-Ea
Btnl2
Smg7
Gemin6
Dock10
Sema4d
Mt2
Mt1
Sqstm1
Orc4
Mbd5
Xpc
Lsm3
Ceacam18
Xpo5
Polh
Rnf7
Pstpip2
Atp5j2
Eif4a1
Hagh
Fahd1
Cd68
Mfsd4a
Tubb2b
Pkdcc
Uvssa
Slamf6
Hs6st1
Serpinb9
S100a14
Spred2
Tnfaip3
Med26
Il10
Cant1
C1qtnf1
Il31ra
BC016579
Picalm
Marveld2
Pxk
Slc20a1
Atg10
Kpna3
Spats2l
Csde1
Stag1
Pcmtd1
Gm9758
Tfg
Stat3
Wrnip1
Ipo8
Ssbp1
Insig2
Mfsd4b4
Fndc7
Tnfrsf11a
Icam5
Icam4
Icam1
Prps1l3
Mipol1
Gm4981
Dux
Arhgap15
Cfap298
Bbs2
Rab1a
Srrm1
Sh3glb1
Smarca5
Pds5b
N4bp2l2
Rhobtb1
A930033H14Rik
Amz2
Osbpl7
Mrpl10
Lrrc46
Hspa1b
Gm19345
Ncf4
Mark2
Cbln3
Khnyn
Ralgds
Olig2
Taf9
Rad17
Ak6
Pofut1
Plagl2
Dars2
Creb1
Has2
Susd6
Il17c
Hspb3
Tmem39a
Kxd1
Fkbp8
Csnk1a1
Ppp1r8
Tnip1
Fxr1
Erlin2
Hmga1b
Hmga1
Nuak2
Bdh1
Dclre1b
Ap4b1
Scrib
Ccdc91
B4galt5
Rars2
Orc3
Stx11
Il1rn
Ctsh
Arid3a
Calm3
Gtf2e2
Gpr150
Nrep
Gse1
Dusp4
Nub1
Il18r1
Lmna
Ap1s1
Cop1
Cdkn2aip
Zcchc2
Unc93a2
Trim56
Xylt1
Ube2q1
Chrnb2
Pbrm1
Gnl3
Usp15
Fam122a
Mrgprh
Mas1
Pum1
Slc25a12
Epg5
Rab27a
Ptpn2
Dcaf10
Alg6
Zfp865
Zfp524
Fiz1
Jak2
Abhd10
Cd80
Adprh
Tjp2
Spop
Xpnpep3
St13
Dnajb7
Med6
Tbck
Aimp1
Cct8
Haus6
Serp1
Eif2a
Usp16
Ap1g1
Gzmm
Cdc34
Ankle2
Ndufs5
Trappc9
Ankrd13c
Spg11
Samd4b
Gmfg
Rb1cc1
Eef1a1
Ildr1
Zdhhc21
Cbfa2t3
Ube3c
Phlda3
Olfr806
Arid3b
Stim2
Ypel4
Clp1
Derl1
Ints2
Msi1
Snx5
Mgme1
Pdlim4
P4ha3
Zfpm1
Slc44a1
Nhsl1
Traf1
Il13
Prpsap1
Srsf1
B3gntl1
Plekhf2
Atxn7l1
Sun2
Irf2bpl
Drg1
Manbal
Psmd3
Srr
Smg6
Lsm6
Sirt1
Slc39a1
Crtc2
Nfkb1
Etfdh
4930579G24Rik
Csrnp3
Gm27021
Emc8
Cox4i1
Dhx40
Sec14l1
Spry2
Elf3
Ywhaz
Eloa
Gabpa
Atp5j
Tsc1
Pemt
Kdm2a
Timm13
Lmnb2
Gramd4
Napg
Cox5a
Pgam1
Tmem270
Cldn13
Lrrfip1
Capn2
Rbm17
Tex2
Map3k2
Pum2
Csf2rb
Eapp
Sprr2a3
Klhl38
Atg16l1
Mtmr10
Zbtb32
Kmt2b
Smim14
Sec61a1
Riok3
Serhl
Pcdh7
Apobec1
Gdf3
Bcl3
Lsp1
Dbi
3110009E18Rik
Stx7
Ubald2
Rbm33
Usp44
Tgfbr3l
Map2k7
Esrp2
Spdye4b
Rbak
1810037I17Rik
Sh3tc2
4921528I07Rik
Gtf2i
Retreg1
Parp11
Cldn4
Rasef
Jph1
Ppp2ca
Lpcat2b
Btbd8
Tmem33
Rnf183
Hbs1l
Ift46
Arcn1
Myb
Klf4
Cdk11b
Polr2e
Tyrobp
Nfkbid
Hcst
Commd1
Cct4
Uchl5
Ro60
Them4
Gmcl1
Dnajc10
Rbm6
Tmem168
Tfap2a
Oaz3
Mrpl9
Htt
Pnrc1
Mterf1b
Pan2
Il23a
Rassf2
Tmx1
Spib
Mybpc2
Gpatch4
Cs
Ttc25
6030468B19Rik
Tmem214
Mapre3
Wdr44
Pim1
Vps13a
Aldh9a1
Cox8c
2900026A02Rik
Nxpe4
Ptdss2
Ing5
Dtymk
Gabpb1
Naxe
Ikbkb
Slc39a14
Dok3
Ddx41
Smn1
Hnrnpll
Ephx1
Cmah
Crhbp
Lonp2
Snx16
Snx3
Apobec3
Fbxo42
Fgf21
Izumo1
Fut1
Speer4f1
Clptm1
Apoc2
Syngr1
Rpl3
Ovol1
Ap5b1
Cyrib
Lad1
Gprin2
Src
Tbp
Psmb1
Lyrm7
Hint1
Ccl17
Il18bp
Ccdc126
Tmprss4
BC049352
Angel2
Rhov
Msln
Slc26a8
Mapk14
Micall2
Dusp16
Sertad3
Sertad1
Tex30
Cartpt
Thsd4
Rhbdf1
Mpg
Fam135a
Rps3
Resf1
Lnpep
Hal
Cdkn1a
Blnk
Tmed6
Pdf
Nip7
Cog8
Mcl1
Fem1b
Myl6b
Myl6
Tvp23b
Otud7b
Tfrc
Mthfs
Mthfsl
Zxdc
Cnp
Sphk2
Dbp
Car11
Bcl2a1b
Marcks
Tdp1
Efcab11
Sh3bp5
Myo1g
Plekhs1
Psma6
Rara
Ubqln4
Rab25
Lamtor2
Spock1
Ciita
Gm21119
Gm15319
Cherp
Uqcc3
Ubxn1
Usp4
Gpx1
Spata5l1
AA467197
Slc25a51
Tmpo
Klf9
Lyrm9
Atp9a
Tmem63a
Lefty1
Tsc22d1
Uggt1
Colq
Hbp1
Magi1
Gm13290
Gm13289
Gm13285
Ifnz
Gm13272
Shld2
Glud1
Lca5
Fnbp1l
Ppp1r12a
Arid2
Speer4e
Skint9
Gmfb
Cgrrf1
Atr
1700065D16Rik
Cacybp
Skint2
Tufm
Rab6a
Wdr12
Carf
Ranbp6
9930021J03Rik
Krt14
Mrpl22
Gemin5
Nelfa
Casp4
Tent2
Wdhd1
Socs4
Mtmr2
Tsn
Wfdc21
Heatr6
Snx14
Atp5g3
Jmjd1c
Cnot2
Slc38a1
Secisbp2l
Jarid2
Zfp800
Tmem129
Tacc3
Slbp
Tmem147
Gapdhs
Oard1
Nfya
Casp6
Snip1
Dnali1
Sesn2
Colca2
Rubcnl
Arpc1a
Atl3
Sfi1
Eif4enif1
Gm4791
Atxn2l
Med18
Grb2
Nup133
Cipc
Slc9a8
Bhlhe41
Entpd4b
Entpd4
Irak1bp1
Gm572
Myo15