ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5576459 | E8.5 embryos
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◣ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Txndc11
Nfat5
Hnrnpa0
Nfyb
Kat6a
Ctnna1
Zfp341
Pxmp4
Cldn34d
E030030I06Rik
Hsp90aa1
Stat3
Vangl2
Sspn
Stat1
Hspe1
Hspd1
Syp
Tlx2
Pcgf1
Mob4
Prr14l
Depdc5
Pfdn4
Cyp24a1
Nkx2-6
Il31ra
Slc35b2
Hsp90ab1
Alx3
Dmbx1
Abca3
Abca17
Cd209a
Gpr84
Fabp4
Ski
Slc14a2
Smc2
Pou3f1
Ssbp2
Dnajb7
Xpnpep3
St13
Arl4d
Pdgfrb
Cdx1
Skor2
Tbc1d14
Amotl2
Kif2c
Greb1
Fbxw4
Slc32a1
Slc35e2
Lyl1
Kpna1
Six2
Ttc28
Sim2
Tal1
BC107364
Gtf3c6
Dlx1
Hmx3
Hmx2
H3c6
H2bc8
H2ac8
H1f3
Prepl
Camkmt
Hsph1
Kifc1
Gm4312
Gm4307
Gm4305
Gm4303
Gm4302
Gm4301
Tex14
Abhd6
Zbtb4
Slc35g3
Polr2a
Tmem125
Hspa8
Kifc5b
Fam90a1b
Apoo
Ssbp3
Gm51573
Egr1
Taf12
Gmeb1
Eapp
Pitx1
Mafa
Six3
Foxe1
Prdm14
Zcwpw2
Azi2
Uspl1
Tmem107
Acot7
Runx3
Foxd4
Otx1
Pde10a
Bub3
Ubb
St3gal4
Tfap2c
Cerk
Nr5a1
Raet1e
Raet1a
Tbx2
Lhx6
Ubc
Fam53c
Cdc25c
Sirt4
Vax1
Serpinh1
H3c15
H3c14
H2ac19
H2ac18
Alx1
Tlx1
Taf4
Pradc1
Gad1
Cct7
Hdac2
Foxi3
H2bc6
H1f4
Prdm16
Dnaja1
Treml4
Setx
Mecom
Lhx2
Fcgr3
Evx1
Sim1
Hnrnpa2b1
Cbx3
Gm4981
Dux
Irx3
Hoxc10
Hoxc11
Fus
Ubfd1
Ears2
Calm1
Hspa1b
Sox9
Pura
Polk
Cert1
Fermt1
Mnd1
Isl2
Dlx4
Csrnp2
Zfp536
Stap2
Mpnd
Hoxb3
Hoxb2
Gtf2a1
Actb
Tfrc
Id4
Barhl1
Hoxb8
Hoxb7
Hoxb6
Nabp1
Tlx3
Prkra
Pjvk
Barx1
Rnaset2b
Rnaset2a
Flt1
Shisa3
Aldh1a2
Pik3r2
Ifi30
Stip1
Slc41a3
Mettl1
Eef1akmt3
Cyp27b1
Ccdc134
Tmem18
Dnajb1
Etfrf1
Casc1
Plau
Foxl2
Vax2
Rita1
Pcif1
Ddx54
Hoxd3
Hoxd8
Rnf220
Napepld
Zfp523
Tmem50a
Syf2
Rsrp1
Chordc1
Ube2b
Cdkl3
Magohb
Tma7-ps
Ttc39d
Osr2
Stag1
Ppig
Hmgn2
Zpbp2
Ifnz
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13277
Gm13276
Gm13272
Ikzf3
H4c2
H4c1
H3c2
H3c1
H2ac4
H3c3
H2bc3
Srsf3
Rax
Dnajb9
Aasdh
Hnf1b
Zc3hav1l
Poldip3
Extl3
Ccdc194
Vipas39
Pdgfra
Cct8
Ahsa1
Tubgcp6
Hdac10
Olfr890
H4c14
Ncl
Guf1
H3c13
H2bc18
Zfp959
Commd1
Cct4
Vsx2
Lbx1
Wt1
Tspan13
Neurod2
H2bc4
H2ac6
G3bp1
Atox1
Ntn1
Zfp146
Alx4
Speer4f1
Jtb
Satb2
Ssu72
Nkx2-4
Tti2
Pts
Zfp568
Hmx1
Scd4
Osbpl9
Hddc2
Sphk2
Spaca4
Rpl18
Phf6
Fam83e
Dhh
AW549877
Eif4g3
H4c11
Pnpla8
C1ql1
Samd10
Prpf6
Zfp512b
Adk
Ap3m1
Hoxc12
Tmem163
Tbx5
Ralyl
Btbd6
Hoxc6
Hoxc5
Prdx1
Pax5
Gbe1
Fkbp4
Bmpr1a
Tubb2b
Onecut2
Gsx2
Ccdc117
2410002F23Rik
Cyp2d34
Pctp
Paip2b
Aars2
Dnajb12
Ube2q1
Chrnb2
Zfp873
Rpl22l1
Mrpl2
Klc4
Cul7
Eef2
Dapk3
Trim27
Gm10499
Rrp1
Nr2e1
Foxf1
H4f16
H2aj
Anks1b
Trim39
Mylip
Btbd9
Ndufs1
Eef1b2
Xrn2
Slc25a29
Selenot
Emx1
Prdm13
Eomes
Deaf1
Mafb
Itgb1
Tdrp
Slc25a38
Sgf29
Aunip
Wdr4
Thumpd1
Ndufv3
Hmgb2
Zdhhc3
Tfap2e
Pxt1
Plod2
Kctd20
Exosc7
Gpam
Odc1
Sp6
Snrnp70
Klf14
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Gdf7
H3c11
H2bc22
H2ac22
H1f5
Ero1a
Kctd9
Cdca2
Pax7
Hpse2
Ciart
BC028528
Rdm1
H60b
Cenpv
Slc9a1
Slc30a3
Mvk
Mmab
Jund
Iqcn
Ahsa2
Prox1
Carmil1
H2bc14
Ubxn7
Ier5l
H3c10
H2bc13
H2ac13
Nup153
Cul5
Unk
H3f3b
Txn1
Rps19bp1
Ncaph
Itpripl1
Atf4
Acin1
1700123O20Rik
Stag3
Gpc2
Gal3st4
Tsc22d1
Tmem70
Eloc
Utp15
Ankra2
Stmn1
Mto1
Ebf1
Cpe
Cgas
Nup133
Dennd6a
2700062C07Rik
Oaz1
Dlx3
Gm9758
Vcpkmt
Otp
H4c18
H4bc24
H2bc23
H2ac24
H2ac23
Mtx3
Cbr3
Asxl1
H1f2
Yap1
Mcph1
Fam174c
Cirbp
Hand1
Shc3
Sfi1
Eif4enif1
Seh1l
Map2k2
Creb3l3
Pcnp
Dusp1
Trmt10c
Cfl1
Tbx4
Rxylt1
Rps20
Specc1
H4c4
H3c4
H2bc7
H2ac7
Mthfsd
Foxl1
Foxc2
Trim2
Gnal
Hoxa13
Umps
Hoxa11
Plcg1
Elavl2
Ankrd60
Rbm47
Maco1
Tmed3
Idh3b
Crot
Tiparp
Teddm1a
Glul
Dars
Gm2237
Hnrnpab
Foxc1
Mfsd14a
Lmx1b
Speer4d
Asph
Pigz
Ccdc62
9130401M01Rik
Mllt3
Secisbp2
Cks2
Nhlh2
Myl4
Cdc27
Tmem30b
Npy
Nefl
Phox2b
Haus4
Dmrt1
Ebf2
Wbp4
Elf1
Zfp24
Nolc1
Nipa2
Cck
Nkx3-2
Hmbs
H2ax
Esrrb
Dpagt1
Eif4b
Ywhaq
Zfand2a
Nfyc
En1
Hoxa7
Rae1
Hoxa9
Mta2
Hoxa10
Txnrd3
Srrd
Prex2
Pax2
Hps4
Bcl6
Ddx59
Spata13
Polg2
Ddx5
Cep95
Akap8
Olig2
Mios
Gm3739
Gabpb1
Ppdpf
Maff
Rft1
Cers2
Anxa9
Zfp800
Prpf19
Ppwd1
Cenpk
Rrp1b
Hsf2bp
Zglp1
Tmem131l
Dennd6b
Fbxo46
Bhmg1
Mtf2
Zic4
Rasgrf1
Cwc22
Ubqln1
Tdp2
Irx2
Cacnb4
Acot13
Kbtbd6
Rabep2
Sidt1
Rps3a1
Prdm6
Mrps28
Cbln1
Maml3
Nt5c3
Flywch1
Esyt2
Cnpy1
Bves
Wac
Ikzf1
Arpp21
Zfp518b
Onecut3
Atp6v0c
Dmrt3
Amdhd2
Rap2a
Acan
Irx5
Pou6f1
Tmem39b
Rasef
Wtap
Sox14
Trim47
Usp40
Rbm6
Ptgfrn
4930453N24Rik
Stard6
H2-Ab1
Fgf5
4930503L19Rik
Hikeshi
Gmnn
Gm5796
Hs3st6
Tbr1
Sp9
Rpl23
1700001P01Rik
Ebf3
Zfp513
Snx17
Eif2b4
Crocc
Edn1
Rbmxl2
Hsf1
Grin2b
Bop1
Larp4
Wnt1
Tfap2b
Rcor1
Gata5
Fgf15
Irx1
Zdhhc6
Vti1a
Tbc1d5
Senp8
Pax1
Myo9a
Slc16a14
Creb1
Spata18
Sgcb
Pacsin1
Acvr1b
Kmt2a
Peli3
Cldn7
Olfr433
Ifi205
Hoxb4
Tanc1
Lss
Zc3h11a
Zbed6
Trem1
Mfap1b
Bex3
Themis3
Mrpl23
Sema6a
Ubl4b
Kdm5a
Ccdc77
Cxcl12
Hoxd4
Ppp1r7
Pask
Fsbp
Ddah1
Tfip11
Gm1673
Ankrd37
Tmem231
Gabarapl2
Sp4
Prxl2a
6430548M08Rik
Atp1a2
Sync
Ndfip2
Plet1
Map3k20
Slc44a3
Tmem114
Pgam2
Trio
Prss50
Prss46
Lrrc18
Nat8l
Morc4
Cystm1
Gm13271
Stard10
Atg16l2
Lhfpl5
Lpp
Gabarapl1
1700029F12Rik
Cdrt4
Smim3
Cflar
Cipc
Gtf2ird2
Zmpste24
Tmco2
Slc46a1
Lmo4
Surf6
Fndc7
Ugt1a1
Mroh2a
Cebpa
Olfr806
Unc80
Ncoa5
Ubr3
Olfr535
Serpinb1a
Slc25a17
Urgcp
Vgll1
Saa4
Saa3
Aspa
Bglap2
Bglap
Olfr263
Cd46
Zfp7
Zfp251
Fzd10
Lpar6
Olfr1252
Hexb
Rin3
Prcc
Smim8
Ddi2
Ms4a1
B3gnt7
Oas1g
Celf1
Zcchc2
Olfr1412
Olfr1411
Stambp
Scara5
Hoxc4
Ido1
Sox5
Otud4
Olfr1368
Lax1
Etfbkmt
Zfp446
BC048403
Tlr3
Slc25a20
Arih2
Trmt6
Mcm8
Arhgap32
Zfp382
Dut
Aqp7
Wdr72
Gm3604
Wdr91
Stra8
Ccdc89
Bmp8b
Bard1
Thbs1
Gm34653
Fbxw2
Mb
Mettl27
Hpd
Slc22a29
Wwp2
Rnase2b
Plekha3
Fkbp7
Olfr826
Depdc1a
Tom1
Hmgxb4
Rnf165
Bcat1
Ctsf
Lin28a
Wwox
Stfa1
Scgb1a1
Ube2h
Cltc
Wnt6
Paip1
Pomp
F11r
Plekha7
Nwd2
Ets1
Fem1al
Eif2d
Dyrk3
Slc35f5
Fhl2
Enc1
Gpr161
Thrap3
Inpp1
Erfl
Agpat4
Stra6l
Mtmr3
Reep3
4930486L24Rik
Lin52
Aldh6a1
Vcpip1
Cited2
Cd300e
Serpinb9e
Hes1
Defa6
Defa24
Epha1
Frrs1
Pkdcc
Fbxo21
Olfr648
Rnf214
Pcsk7
Klhl22
Ptpn18
Garnl3
Zfp1
Ppef2
Hoxa6
Slc39a2
Armc12
Gas7
Fabp12
Aqp9
Slc14a1
Eif2s2
Tor3a
Dnm2
Zkscan17
Slc5a11
Gm13212
Olfr414
Glra4
Drd3
Mfge8
Gm5622
Tbce
Rdh7
Kifc3
Uaca
Spatc1
Gm7244
9430069I07Rik
Hoxa4
Olfr1229
Dennd1b
Defb11
Ly6i
Abca8b
Aadacl2fm1
Plcd1
Arsa
Rnf157
Flacc1
Gstm2
Aplp1
Zfp996
Cdca7
C7
Grhl3
Spred2
Drc7
Pramel30
Zbtb10
Rab32
Slc30a1
Tceal9
Mrgbp
Ifi209
Usp6nl
Klf9
Apol10a
Cyp2d12
Septin1
Olfr960
Naglu
Zfp111
Pbp2
Gsg1
Tango6
Ankrd1
Tor1a
Exoc5
Ap5m1
Adar
Hat1
Gm525
Zfp820
Smad5
Hoxd9
Hoxd10
Gm29802
Gm10100
Fhit
Tceal3
Ccm2
Uba5
Acad11
Gm1070
Adamts7
Ccdc171
Zfp553
Lrfn2
Ncf2
Gm14444
Mrvi1
Olfr725
Vwf
Mbnl2
Phc2
Snrpn
Cldn3
Usp20
BC005624
Yars2
Olfr1396
Amer3
Zfp449
Il17rd
Zer1
Tbc1d13
Sod3
Myh9
Sos2
Btbd35f26
Btbd35f16
Btbd35f11
Btbd35f10
Utp25
Apobec3
Rtp2
Avl9
Ly6a
Slc44a4
Rffl
Setd4
Cbr1
1700123K08Rik
Rps6ka2
Smap1
Gm6551
Pramel31
Glo1
Dnah8
Ceacam2
Smarcad1
Tmsb10
Cdk18
Prl6a1
Kcng2
Cd300a
Zfp984
Igsf3
Rpgrip1
Hnrnpc
Zfp280c
Gip
Olfr859
Hoxb9
Dguok