ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Hoxd9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◣ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Prdm13
Hoxc6
Hoxc5
F11r
Hoxa4
Map4k5
Atl1
Gpr84
Slc37a3
Rab19
Notch1
Ubl4b
Pcnx3
Map3k11
Ngdn
Synpo
Alb
Atp1b4
Pkdcc
C1ql3
Hoxb4
Hoxb3
Hoxd8
Hoxd4
Hoxd3
Riox2
Efnb2
Zfp503
Zc2hc1c
Speer4a
Maml2
Rnf165
Zfp473
Vrk3
Sptssa
Hoxc4
Tmem268
Atp6v1g1
Hoxb6
Hoxb5
Ccdc182
Rbp2
Hdx
Rbm25
Pomc
Cxxc4
Ffar4
Arfgef1
Gm973
Otp
Mmrn1
Acsf2
Elf5
Hoxa2
Hoxa1
Hoxc8
Sv2b
Hoxb7
Nkx2-2
Csrp3
Crb1
Lpgat1
Hes3
Grap2
Nkx6-1
Arhgap28
Hoxa6
Hoxa5
Hoxa3
Dpyd
Ifrd1
Meox1
Gm527
Kif13b
Gcnt2
Hoxa7
Zadh2
Tshz1
Rab30
Slc5a12
H4c11
H2bc14
Ttc30a1
Baalc
Calcrl
Dhx8
St3gal2
Trim59
Itgb8
Csrnp3
Dph5
Ttc39b
Rarb
Gtf2h4
Prkar2b
Prickle1
Khdc4
Mbnl1
Kank1
Mab21l2
Clasp2
Gpatch2l
Irx1
Sqor
Gpc6
Skap2
Scn1a
Slc9b2
Gnat3
Crlf2
Myo1d
Olfm2
Dll1
Trio
Ociad2
Tox3
Alox5ap
Sox21
Neurod4
Tlk1
Ece1
Thumpd3
Mllt3
Wt1
Cbfb
Prkar2a
Ccdc136
Cox7a2l
Tjp2
Acyp1
Cacnb2
Rab27a
Epha5
Osbpl9
Tshz3
Psd3
Crkl
Olfr71
Ncoa7
Ptprd
Psmd12
Pitpnc1
Ttll11
Srpx
Bahcc1
Dtx4
Foxf2
Tbc1d22a
Crp
Kmt5c
Cpsf1
Foxp2
Myo10
Dap3
Cux1
Ccdc174
Oxnad1
Dph3
Slc31a2
Tmem156
St8sia2
Apcs
Nkx2-9
Iqca
Phox2b
Foxn3
Rara
Map4
Pdlim5
Zfp703
Elmo2
Cemip2
Plcd3
Acbd4
Galnt14
Mecom
Nrg1
Hhip
Hsdl2
Plxnc1
Dmrt3
Stox2
Ccnd1
Wdr7
Ccn1
Gfra3
Vta1
Iigp1
Cubn
Zfp330
Gm4737
Ascl1
Olfr646
Hipk3
Vamp9
Pex5l
Olfr572
Olfr571
Btg2
Dnajb13
Rtn4rl1
Cmtr1
Egr2
E4f1
Mdm2
Gm4791
Pold3
Prdm6
Hoxb8
Hand1
Dnm2
Dst
Rnf220
Fbxo28
Iglon5
Tmem97
Cep128
Cdca8
9930104L06Rik
Rpgrip1
Rhbg
Adipor2
Copz1
Sumf1
Tnfsf13b
Trib2
Rtl1
Stxbp6
Lpp
Gask1b
Ntn1
Lysmd3
Zfp423
Tnrc18
Lyrm9
Zfp945
Wdr18
Susd1
Kbtbd13
Glrp1
Mad2l2
Lemd2
Draxin
Smim8
Smug1
Efcab5
Th
Got2
Olfr298
Itch
Col4a2
Higd1c
Poc5
Pcnx
Phc2
Adtrp
0610009B22Rik
Rhcg
Meis2
9430069I07Rik
Gprc5d
Acot1
Aff3
Cited4
Oacyl
Phgdh
Vapb
Fam174a
Actn4
Sgpp1
Ermn
Rabl2
Atg4c
Ccdc33
1700010B08Rik
Galk2
Cops2
Fam181a
Skida1
Pdia5
Mllt10
C330018D20Rik
Ebf1
Foxp1
Zfp143
Tob1
Phactr3
St8sia4
Lmbr1
Ip6k3
Rnase12
Rnase11
Gucy1b2
Cfap58
Clmn
Galr3
Fyn
Rps10
Nacc2
Mycl
Ivd
Tmigd1
Nap1l1
Eif2s3x
Tti2
Slc9a9
Cxcl12
Gm18905
Gm15517
Acp4
Kdm8
Toe1
Mutyh
Hpdl
Sox6
Aktip
Kifc3
Fzd8
Hnrnpa1l2-ps2
Zfand3
Cradd
Skil
Dach2
Tbc1d10b
Septin1
Mylpf
Srgap3
Slc7a1
Lrrtm2
Fbxo16
Krt9
Tox2
Plpp6
4430402I18Rik
Scube2
Tspan14
Smg9
Smad1
Kcnip1
Pth1r
G2e3
Lta4h
Dach1
Phpt1
Mamdc4
Ajm1
Map1b
Poglut3
Cyp19a1
Slc44a3
Radil
Bend4
Sall4
Cntnap2
Nol4l
Nudt1
Mrm2
H4c8
H3c8
H2ac10
Pax8
Ric8b
Ppp2r5b
Atg2a
Cryzl2
Clasrp
Mthfd2
Mob1a
Fbxw7
Etv6
Krt222
Adgrv1
N4bp2l1
Tmem53
Tubb6
Rps23
Megf10
App
Meis3
Iffo2
Ppp1ccb
Grem2
Men1
Map4k2
Cnr1
Zc3h12c
Etv3
Chst12
Ndnf
Fmo2
Ttr
Tmem255a
Hnrnpl
Ech1
Tom1l2
Drc3
Lin28a
Vmn1r53
Pum1
Tmem132b
Fgd3
Hhat
Fgl2
Wnk1
Dynll1
Best3
Asic4
Ppp1r9a
Ttc1
Kcnk4
Gpr137
Esrra
Catsperz
Thrb
Tcerg1
Drd2
Rabep2
Cldn34d
Tle3
Prmt3
Mbp
Rragd
Pik3r4
Palld
Bmp7
Scarb2
Pla2g2d
Dip2b
Zc4h2
Ncam1
Med25
Fuz
Ss18l2
Sec22c
Nktr
5730409E04Rik
Lrrn3
Sf3a2
Plekhj1
Amh
Tpm3
Ror2
Chchd5
Hibadh
Cit
C1qtnf4
D6Ertd527e
Vmn2r23
Tmem260
P4ha3
Dock3
Tmem167b
Mpv17l
Mfsd9
Lck
Kif2c
Txndc11
Cyp2s1
Cd83
Cbfa2t3
Spata7
Tcim
Flrt1
Atrn
BC051142
Trim23
Trappc13
Shld3
Upk3bl
Tle4
Cda
Lrfn2
Prtg
Celf3
Cachd1
H6pd
Pou3f3
Col6a4
Smarcal1
Zfp41
Tnks2
Ajuba
Lrg1
Ppp2r2a
Mrpl33
Evi5l
Slc25a42
Ivl
Thsd4
Sema6b
Fmc1
Bbs2
Dusp5
Scrn1
Nup107
Slc6a1
Cnot3
Slc4a8
Ripor2
Ppp3ca
Chrna4
St6galnac1
Lrrcc1
Ccdc171
Akap6
Ift46
Emcn
Arcn1
Mapk9
Ubqln2
Spen
Ing3
Caml
Asf1b
Gm38499
Slc27a4
Epb42
Pgm2
Pacrgl
Cyren
Setd4
Man1a2
Cbr1
Purb
Psmg2
Cep76
Slc5a6
Cad
Atraid
Hpf1
Uncx
Lin28b
Pdxdc1
Rab18
Sirt4
Tnfaip8l2
Mfng
Inka2
Ddx20
Rhob
Zdhhc2
Utp4
Snca
Derpc
Chtf8
Pabpc4l
Cpa5
Atp5g2
Arpp21
Fam78b
Cbx2
Tatdn2
Kbtbd8
Rad9b
Muc6
Bzw1
BC107364
Spp2
Xpr1
Asxl3
Dennd5a
Dad1
Abhd4
Ptger2
H4c2
H4c1
H3c2
H3c1
H2ac4
H1f1
Dbx2
Garre1
Vps41
Prkd3
Esrrg
Pex2
Sp9
Tmem200b
Lhfpl2
Prrxl1
Mrpl23
Ubp1
Zfp628
Ssc5d
Nat14
Gm36210
Vkorc1
Prss53
Bckdk
Gja10
Casp8ap2
Tph2
Nsg2
Percc1
Ccdc88c
Hivep2
Rptor
Scmh1
E130308A19Rik
Gtf2a1
Mtcl1
Zkscan1
Olfr1441
Ccdc187
Dus1l
Metrn
Lpar4
Fbxl16
Wnt10a
Gm14092
Tjap1
Rag2
Iftap
Ppp1r15b
Pik3r1
Cnga4
Angpt4
Ell
Mnx1
Cntf
Aven
Rora
Lipo4
Marveld3
Gm21698
Gm21671
Gm21663
Gm10471
5031410I06Rik
Foxn4
Map6
Rnf44
Gfod1
Nkx2-6
Ccdc154
Epsti1
Spock2
Nme6
Josd1
Ifna9
Gtpbp1
Gbx2
Nr3c2
Wfdc6a
Tceal7
Pias4
Eppin
Mrps36
Egln2
Cyp2t4
Ccbe1
Asap1
Gucy1a1
Nr4a2
Pigm
Lpo
Kansl1l
Stk33
Agfg1
Mapre1
Mrps33
Osbp
Pyroxd1
Mpl
Hes1
Tubg2
Plekhh3
Tbc1d9
Add2
Ythdf3
Sos1
D630045J12Rik
Cnn2
Abca7
1700122O11Rik
Mafb
Glp1r
Lhpp
Zfpm1
Atic
Nipsnap1
Postn
Pakap
Gse1
Grpel2
Enpp3
Tub
Fzd3
Emp3
Ccdc114
Slc22a1
Znrf4
Slc22a22
Ncoa5
Mybpc1
Mgat5
Lrrc4
Aqp8
Adcy2
Zswim5
Mfsd10
Zfp775
Rps26
Repin1
Gm5111
Rprml
Lyzl6
Gpn3
Fam216a
Adora2a
Xaf1
Sertad4
Pfas
Ctc1
Alkbh5
Tbl1x
Ndufc2
Coq7
Capn8
Iqsec1
Ccdc60
Robo2
Pou3f2
Tshz2
Lama5
Tex14
Barhl1
Nebl
Tmem178b
Pkd2l1
Gcc1
Arf5
Evx1
Acvr1b
Wdr6
Sema6d
Dipk1a
Pik3r5
Jund
Iqcn
Elavl4
Fbxw15
Srpk2
Rab28
Lrrfip1
Dhx16
Traf1
Aebp1
Zfp672
Sh3bp5l
Ormdl3
Lrrc3c
Dalrd3
Nell2
Mvb12a
Gtf2ird2
Cd9
Bst2
Sh3bp5
Mob3b
Il3
Ifnk
Csf2
LTO1
Cdhr3
Srprb
Abr
Dpt
Sh3pxd2a
Sc5d
Dip2c
Ksr1
Zfp608
Syt2
Manbal
Kcnip2
Bicd1
Prdm10
Gm7244
Mtss2
Wdyhv1
Atad2
Syne4
Sdhaf1
Pou1f1
Mcub
Fam135b
Trpc7
Kif21a
Hmox1
Rgs5
Gab2
Primpol
Casp3
C1qc
C1qb
Dnajb2
A630095N17Rik
Rab11fip5
Nms
Hoxa9
Hoxa10
Ehbp1
Trrap
Tmem130
Wbp11
Ttc41
Smco3
Hsp90b1
Ctif
BC049715
Gga2
Zfp689
Rusf1
Il5ra
Nedd9
Gas1
Galnt9
Fgd4
Snap25
Slc25a25
Naif1
Foxj2
Cnot2
Arhgap8
Slc43a1
Zdhhc16
Exosc1
Ctsf
Tgif1
Fer
Ankrd40
Ndufb4c
4930550C14Rik
Dbx1
Olfml1
Ankrd6
Nrxn1
Slc38a2
Hapln1
Eef1akmt1
Crmp1
Myl7
Rrp15
Fbxw25
Ogfod3
Mrfap1
Hexdc
Sox1
Dnajb5
Crybg3
Vdac2
Cacna2d1
Spred3
Plaa
Narf
Gng2
Gm12657
Ggn
Epha8
Cybc1
Nr0b1
Marchf10
Dcaf11
Rufy3
Dhrs7b
Zfp593
Grrp1
Gm30191
Eif3c
Nop53
Kmt5a
Nr2f1
Fgfrl1
Gm5544
Elavl2
Rack1
Cables1
Hpgd
H2bc6
H1f4
4933424G06Rik
Schip1
Hlcs
Selenoi
Actr3b
Pou4f3
Rec114
Nr2f2
Kbtbd6
Gpx2
Apela
Rtcb
Mpp7
Gphb5
Pbx1
Zfp334
Casp7
Nrp2
Nr4a3
Mup5
Mki67
Tdgf1
Sall1
Lrrc2
Shh
Ncf1
Gm14137
Gchfr
Prkn
Bcap29
Supt6
Sdf2
2810006K23Rik
Wnt1
Ddn
Dennd5b
Art3
Snrpc
Sgca
Ppp1r9b
Eps8
Olfr1385
Shisa3
Hdhd2
Exoc5
Ap5m1
B3galt1
Ctbp2
4933402D24Rik
Urm1
Fam222a
Cacna1c
Megf9
Btbd3
Rprm
Nrcam
Erich6b
Cacng5
Qrfp
St18
Slc2a10
Cd96
Atp5l
Dcaf12
Arg1
Stra6
Uts2b
Ngef
Neu2
Ttc7b
Snx30
Ebf3
C2cd4a
Mpp3
Taf12
Spag9
Gmeb1
Gm3448
Gm3417
Eif4g2
Plekha6
Il20rb
Ret
Pnoc
Angptl7
Lypd10
Engase
Rnf169
Vamp1
Tcf4
Dyrk3
Rnf4
Pdpn
Adam12
Nol6
Ciao3
Aqp6
Sox5
Msh5
Clic1
Srbd1
Shd
Scrt2
Manea
Fsd1
Crtam
Ccl26
Zc3h3
Lgi1
C2cd5
Slitrk6
Ptprj
Tspan5
Rps29
Eci1
Bco1
Tmem100
Cuedc1
Tmtc4