ChIP-Atlas: Target genes

Potential target genes for Cdx2

Query protein: Cdx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5576459 | E8.5 embryos
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Cdx2's Target genes

◢ Cdx2: Average

◣ SRX5576459: E8.5 embryos

◢ SRX1980013: EpiSC

◢ SRX1980014: EpiSC

◢ SRX19320236: ES cells

◢ SRX19320237: ES cells

◢ SRX19320238: ES cells

◢ SRX028555: Intestinal villus

◢ SRX112502: Intestinal villus

◢ SRX112503: Intestinal villus

◢ SRX112504: Intestinal villus

◢ SRX11593784: Trophoblast stem cells

◢ SRX11593785: Trophoblast stem cells

◢ SRX204146: Trophoblast stem cells

◢ SRX404307: ZHBTc4

◢ Cdx2: STRING

Nfat5
Hnrnpa0
Nfyb
Kat6a
Ctnna1
Zfp341
Cldn34d
Hsp90aa1
Stat3
Vangl2
Sspn
Stat1
Hspe1
Hspd1
Syp
Tlx2
Mob4
Prr14l
Pfdn4
Cyp24a1
Il31ra
Hsp90ab1
Alx3
Dmbx1
Gpr84
Fabp4
Ski
Pou3f1
Ssbp2
Xpnpep3
St13
Cdx1
Skor2
Tbc1d14
Slc32a1
Slc35e2
Lyl1
Kpna1
Six2
Ttc28
Tal1
BC107364
Gtf3c6
Dlx1
Hmx3
Hmx2
H3c6
Prepl
Camkmt
Hsph1
Kifc1
Gm4307
Gm4305
Gm4303
Tex14
Abhd6
Slc35g3
Polr2a
Tmem125
Hspa8
Kifc5b
Fam90a1b
Apoo
Ssbp3
Gm51573
Egr1
Taf12
Eapp
Pitx1
Six3
Mafa
Foxe1
Prdm14
Zcwpw2
Azi2
Uspl1
Tmem107
Acot7
Runx3
Foxd4
Pde10a
Bub3
Ubb
St3gal4
Tfap2c
Nr5a1
Tbx2
E030030I06Rik
Ubc
Fam53c
Sirt4
Serpinh1
H3c15
H3c14
H2ac19
H2ac18
Alx1
Taf4
Pradc1
Gad1
Cct7
Hdac2
Foxi3
H2bc6
H1f4
Prdm16
Dnaja1
Treml4
Setx
Mecom
Lhx2
Hnrnpa2b1
Cbx3
Gm4981
Irx3
Hoxc10
Fus
Ubfd1
Ears2
Calm1
Hspa1b
Sox9
Pura
Polk
Fermt1
Cert1
Mnd1
Isl2
Dlx4
Csrnp2
Zfp536
Stap2
Mpnd
Hoxb2
Fcgr3
Gtf2a1
Actb
Tfrc
Id4
Barhl1
Hoxb7
Nabp1
Tlx3
Prkra
Pjvk
Barx1
Rnaset2b
Rnaset2a
Flt1
Shisa3
Aldh1a2
Pik3r2
Stip1
Slc41a3
Mettl1
Eef1akmt3
Dnajb1
Etfrf1
Casc1
Plau
Foxl2
Rita1
Pcif1
Ddx54
Hoxd3
Rnf220
Zfp523
Rsrp1
Napepld
Chordc1
Ube2b
Cdkl3
Magohb
Osr2
Stag1
Ppig
Hmgn2
Ifnz
Gm13290
Gm13289
Gm13285
Gm13276
Gm13272
H4c2
Srsf3
Rax
Ikzf3
H3c2
H2ac4
Dnajb9
Aasdh
Hnf1b
Zc3hav1l
Poldip3
Extl3
Ccdc194
Vipas39
Pdgfra
Cct8
Ahsa1
Tubgcp6
Ncl
Zfp959
H3c13
H2bc18
Guf1
Vsx2
Lbx1
Cct4
Wt1
Tspan13
Neurod2
H2bc4
H2ac6
G3bp1
Ntn1
Zfp146
Alx4
Jtb
Satb2
Ssu72
Nkx2-4
Tti2
Pts
Zfp568
Hmx1
Scd4
Osbpl9
Sphk2
Rpl18
Phf6
Hddc2
Fam83e
Dhh
AW549877
Evx1
Eif4g3
H4c11
Pnpla8
C1ql1
Zfp512b
Ap3m1
Adk
Hoxc12
Tmem163
Tbx5
Ralyl
Btbd6
Hoxc6
Hoxc5
Prdx1
Gbe1
Fkbp4
Bmpr1a
Tubb2b
Ccdc117
2410002F23Rik
Cyp2d34
Pctp
Aars2
Paip2b
Dnajb12
Ube2q1
Zfp873
Rpl22l1
Mrpl2
Klc4
Cul7
Dapk3
Rrp1
Nr2e1
Gm10499
H4f16
H2aj
Trim39
Mylip
Btbd9
Anks1b
Ndufs1
Eef1b2
Xrn2
Slc25a29
Selenot
Emx1
Prdm13
Hoxb3
Eomes
Deaf1
Mafb
Itgb1
Tdrp
Slc25a38
Sgf29
Aunip
Wdr4
Thumpd1
Sim2
Hmgb2
Zdhhc3
Tfap2e
Plod2
Kctd20
Exosc7
Gpam
Sp6
Snrnp70
Odc1
Klf14
H2bc12
H2ac12
Gdf7
H3c11
H1f5
Ero1a
Kctd9
Cdca2
Pax7
Hpse2
H2bc22
H2ac22
Ciart
Rdm1
H60b
Cenpv
Slc9a1
Slc30a3
Mvk
Mmab
Jund
Iqcn
Prox1
Carmil1
Ahsa2
Ubxn7
Ier5l
H3c10
H2bc14
Nup153
Cul5
H3f3b
Txn1
Ncaph
Atf4
Acin1
1700123O20Rik
Stag3
Gpc2
Eloc
Utp15
Ankra2
Tsc22d1
Stmn1
Mto1
Ebf1
Cpe
Cgas
Nup133
Dennd6a
2700062C07Rik
Oaz1
Dlx3
Vcpkmt
Pax5
H4c18
H4bc24
H2bc23
H2ac24
H2ac23
Mtx3
Cbr3
Asxl1
H1f2
Yap1
Mcph1
Fam174c
Cirbp
Shc3
Sfi1
Seh1l
Map2k2
Pcnp
Dusp1
Cfl1
Tbx4
Rxylt1
Rps20
Specc1
H4c4
Foxc2
Trim2
Gnal
Umps
Plcg1
Elavl2
Rbm47
Maco1
Tmed3
Nkx2-6
Crot
Tiparp
Glul
Dars
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Hnrnpab
Gm2237
Foxc1
Mfsd14a
Lmx1b
Speer4d
Asph
Pigz
Ccdc62
9130401M01Rik
Hoxa13
Mllt3
Secisbp2
Nhlh2
Myl4
Cdc27
Tmem30b
Npy
Nefl
Phox2b
Haus4
Dmrt1
Ebf2
Zfp24
Wbp4
Nolc1
Nipa2
Elf1
Cck
Nkx3-2
H2ax
Esrrb
Eif4b
Ywhaq
Zfand2a
Amotl2
Nfyc
En1
Mta2
Hoxa9
Txnrd3
Srrd
Rae1
Prex2
Hps4
Bcl6
Ddx5
Cep95
Akap8
Spata13
Olig2
Mios
Ddx59
Gabpb1
Ppdpf
Maff
Gm3739
Rft1
Cers2
Anxa9
Zfp800
Prpf19
Ppwd1
Cenpk
Rrp1b
Hsf2bp
Tmem131l
Dennd6b
Fbxo46
Bhmg1
Mtf2
Zic4
Rasgrf1
Cwc22
Ubqln1
Tdp2
Irx2
H2bc13
H2ac13
Cacnb4
Acot13
Kbtbd6
Rabep2
Sidt1
Rps3a1
Prdm6
Mrps28
Cbln1
Maml3
Nt5c3
Flywch1
Esyt2
Cnpy1
Bves
Unk
Wac
Ikzf1
Arpp21
Zfp518b
Dmrt3
Atp6v0c
Amdhd2
Rap2a
Acan
Pou6f1
Tmem39b
Rasef
Wtap
Trim47
Usp40
Rbm6
Ptgfrn
4930453N24Rik
Stard6
H2-Ab1
Fgf5
4930503L19Rik
Hikeshi
Gmnn
Gm5796
Hs3st6
Rpl23
Zfp513
Crocc
Rbmxl2
Hsf1
Grin2b
Edn1
Bop1
Wnt1
Tfap2b
Larp4
Rcor1
Gata5
Fgf15
Irx1
Zdhhc6
Vti1a
Tbc1d5
Senp8
Pax1
Myo9a
Slc16a14
Creb1
Spata18
Sgcb
Pacsin1
Kmt2a
Peli3
Cldn7
Ifi205
Trem1
Bex3
Themis3
Kdm5a
Ccdc77
Hand1
Hoxd4
Fsbp
Mrpl23
Tfip11
Gm1673
Ankrd37
Tmem231
Gabarapl2
Sp4
Sync
Map3k20
Trio
Lrrc18
Hoxb4
Morc4
Cystm1
Lhfpl5
Prss50
1700029F12Rik
Cflar
Pgam2
Cipc
Gtf2ird2
Zmpste24
Slc46a1
Fndc7
Olfr806
Tanc1
Olfr535
Serpinb1a
Slc25a17
Vgll1
Bglap
Fzd10
Lpar6
Olfr1252
Rin3
Prcc
B3gnt7
Olfr1412
Olfr1411
Zfp7
Scara5
Hoxc4
Ido1
Otud4
Olfr1368
Lax1
Zfp446
Tlr3
Arih2
Zfp382
Wdr72
Ccdc89
Bmp8b
Stra8
Gm34653
Cdrt4
Hpd
Wwp2
Rnase2b
Arhgap32
Rnf165
Ctsf
Lin28a
Wwox
Thbs1
Cltc
Wnt6
F11r
Plekha7
Fhl2
Gpr161
Erfl
Cd300e
Defa6
Defa24
Greb1
Frrs1
Fbxo21
Olfr648
Rnf214
Pcsk7
Klhl22
Ppef2
Slc39a2
Gas7
Fabp12
Aqp9
Slc14a1
Serpinb9e
Dnm2
Zkscan17
Gm13212
Olfr414
Gm5622
Tbce
Epha1
Dennd1b
Defb11
Rnf157
Flacc1
Aplp1
Zfp996
Cdca7
Kifc3
Zbtb10
Stra6l
Rab32
Tceal9
Apol10a
Tango6
Exoc5
Ap5m1
Adar
Hat1
Smad5
Hoxd9
Hoxd8
Uba5
Acad11
Gm1070
Phc2
Cldn3
Amer3
Grhl3
Zfp449
Drd3
Tbc1d13
Btbd35f26
Btbd35f16
Btbd35f11
Btbd35f10
Utp25
Slc44a4
Olfr960
Smap1
Smarcad1
Tmsb10
Cdk18
Prl6a1
Kcng2
Stard10
Igsf3
Rpgrip1
Hnrnpc
Golga7b
Nck2
Lysmd2
H2az1
Zfp42
Acp5
Vasn
Lcn4
Bcor
Akap17b
H2-DMa
Brd2
Zbtb45
Slc10a6
Fem1al
Lsm5
Kcng4
Timm10b
Arfip2
Cemip2
Ppp1r3e
Gm12789
Hoxa5
Zfp982
H2az2
Hoxb9
Gm29802
Lemd2
Tnrc6b
Tmem114
Hoxa4
Ogdhl
Abca4
Lcn9
Glt6d1
Scgb1b27
Herpud2
Slc40a1
Hemgn
Pan3
Ddah1
Slc44a1
Cd59a
Fgd4
BC053393
Pla2g5
Cmtm7
Slco1a6
Shmt1
Upk1a
Gm829
Snx24
Krtap6-5
Gm10228
Ier2
Ednra
BC061237
U2surp
B4galt5
Tie1
Pccb
Saa3
Rin2
Susd5
Il13
Tmem11
Gpkow
Btbd8
Zfp944
Zfp758
Bin2
Cd27
Cryz
Polr2h
Utrn
Hoxa7
Smco4
Zp3r
Txlng
Capza2
Fam50b
Cdh12
Zdbf2
Efna3
Cdc42
Ceacam14
Itprip
Man1a2
Cenpm
Reep3
Speer4e
Lpar1
Cst9
Atp2c1
Spry4
Vmn2r4
Bcl2l14
Atp5g2
Pik3cb
Atp6ap1l
Rdh5
Bloc1s1
Eml1
Ptprs
Tnnt3
Csta1
Tfeb
Vmn1r83
Ccdc43
Trnt1
Upp1
Kif21b
Dsc2
Zfp110
Olfr373
Brd3
Klk14
Coro1c
Grip1
Ppp1r18
Nrm
Fasl
Traf3ip2
Slc49a4
Hspbap1
Ywhag
Sh2d4b
Mbp
Spred2
Mrps24
Elac1
Plch1
Irf2bp1
Sall4
Tmem232
Pdik1l
Rnf128
Enc1
Rock2
Map3k1
Ndst1
Rwdd2b
Nlrc3
Cwh43
Cdh1
Pwwp3a
Atf7ip2
Mllt1
Tbc1d2
Vmn2r16
Rpe
Tmod3
Zyg11a
Olfr782
Pla2g7
Dok2
Elf5
Sec62
Olfr372
Cma2
Ift46
Arcn1
Nat8f5
Hps3
Olfr1510
Myoz2
Gng12
Lrrfip1
Nr6a1
Lpcat4
Sh3bp4
Sgms1
Oit1
Pdpn
Plbd1
Supt6
Sdf2
Olfr1342
Gm21119
Bmp1
Cbln4
Xntrpc
Xndc1
Rnf121
Otx1
Lum
Lect2
Cbfa2t3
Enpp7
Lrrn4
Ubxn11
Cd52
4930467E23Rik
Eif2b5
Gse1
Glyctk
Lpcat2b
Wnt5a
Plet1
Sema4d
Rbm41
Kat6b
Arsg
Usp28
Klhl24
Zfp936
Mtm1
Zfpm1
Wfdc21
Heatr6
Hao2
Igsf23
Hoxa3
Myo1d
Trp53bp2
Slc7a7
Rgs5
Dcaf5
Morc2a
Smagp
Tnfrsf11a
Micu2
Tank
Dao
Kcnj15
Ffar4
Gm45521
Tex48
Reps1
Noct
Itfg2
Gsg1
Akap7
Tdpoz3
Gm614
Fbp2
Gabpb2
2310009B15Rik
Arpc2
Dgka
Exoc6
Ankrd50
Ap2a2
Zbtb7b
D630023F18Rik
Sh3bp2
Adh1
Olfr785
Ezr
Sec14l1
Paqr5
Ppp1r14a
Morc3
C130073F10Rik
Olfr461
Txnrd1
Gm15319
Tmem267
4930474N05Rik
Ptpn13
Ogt
Ppp1r35
Dspp
Sult1c1
Mid1
Wipf1
Pth1r
Mapk11
Tiam1
Muc3
Ccser2
Pou5f1
Abra
4930486L24Rik
Csf2ra
6430548M08Rik
Hus1
Dguok
Arid2
Zadh2
Tshz1
Myo7b
Jarid2
Srrm1
Gsdma3
Bnip3
Mga
Snx12
Hoxc8
Mtmr7