ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Hoxd9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◣ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Prdm13
Hoxc6
Hoxc5
F11r
Hoxa4
Map4k5
Atl1
Gpr84
Slc37a3
Notch1
Pcnx3
Map3k11
Ngdn
Synpo
Atp1b4
C1ql3
Hoxb4
Hoxb3
Hoxd3
Zfp503
Rnf165
Zfp473
Vrk3
Sptssa
Hoxc4
Tmem268
Hoxb5
Ccdc182
Hdx
Rbm25
Arfgef1
Gm973
Otp
Mmrn1
Elf5
Hoxa2
Hoxa1
Nkx2-2
Crb1
Lpgat1
Hes3
Nkx6-1
Hoxa6
Hoxa5
Gcnt2
Hoxa3
Rab30
Zadh2
Tshz1
Slc5a12
Baalc
St3gal2
Csrnp3
Dph5
Khdc4
Mbnl1
Clasp2
Irx1
Sqor
Gpc6
Scn1a
Slc9b2
Gnat3
Crlf2
Trio
Tlk1
Mllt3
Wt1
Cox7a2l
Hoxb6
Rab27a
Epha5
Osbpl9
Tshz3
Pitpnc1
Ttll11
Crp
Kmt5c
Foxp2
Cux1
Ccdc174
Oxnad1
Dph3
Slc31a2
Tmem156
St8sia2
Apcs
Nkx2-9
Phox2b
Foxn3
Rara
Map4
Arhgap28
Pdlim5
Elmo2
Cemip2
Plcd3
Acbd4
Mecom
Hhip
Hsdl2
Stox2
Ccnd1
Wdr7
Ccn1
Gfra3
Vta1
Zfp330
Gm4737
Ascl1
Olfr646
Vamp9
Cmtr1
Egr2
E4f1
Gm4791
Prdm6
Hoxb8
Hoxb7
Hand1
Dnm2
Rnf220
Neurod4
Tmem97
Cdca8
9930104L06Rik
Rhbg
Adipor2
Sumf1
Tnfsf13b
Trib2
Stxbp6
Gask1b
Ntn1
Lysmd3
Ptprd
Lyrm9
Zfp945
Wdr18
Kbtbd13
Glrp1
Mad2l2
Lemd2
Draxin
Th
Got2
Olfr298
Itch
Col4a2
Poc5
Pcnx
0610009B22Rik
Acot1
Aff3
Oacyl
Phgdh
Vapb
Fam174a
Actn4
Sgpp1
Ermn
Rabl2
Atg4c
Galk2
Cops2
Fam181a
Skida1
Pdia5
Zfp143
Tob1
Phactr3
St8sia4
Lmbr1
Rnase12
Rnase11
Cfap58
Galr3
Fyn
Nacc2
Mycl
Eif2s3x
Tti2
Slc9a9
Gm15517
Mutyh
Sox6
Aktip
Fzd8
Hnrnpa1l2-ps2
Zfand3
Tnrc18
Skil
Tbc1d10b
Mylpf
Srgap3
Slc7a1
Lrrtm2
Krt9
4430402I18Rik
Scube2
Smad1
Pth1r
G2e3
Lta4h
Phpt1
Mamdc4
Ajm1
Poglut3
Cyp19a1
Radil
Hoxa7
Bend4
Sall4
Cntnap2
Nol4l
Nudt1
Mrm2
H4c8
H2ac10
Pax8
Ric8b
Atg2a
Cryzl2
Clasrp
Mthfd2
Fbxw7
Krt222
Copz1
Rps23
Meis3
Ppp1ccb
Men1
Cnr1
Zc3h12c
Etv3
Chst12
Ndnf
Megf10
Fmo2
Ttr
Tmem255a
Ech1
Tom1l2
Drc3
Pum1
Tmem132b
Hhat
Ccdc33
Wnk1
Dynll1
Asic4
Ttc1
Kcnk4
Thrb
Tcerg1
Drd2
Rabep2
Cldn34d
Tle3
Mbp
Rragd
Pik3r4
Pla2g2d
Dip2b
Myo10
Zc4h2
Ncam1
Med25
Fuz
Ss18l2
Lrrn3
Sf3a2
Plekhj1
Tpm3
Chchd5
Hibadh
C1qtnf4
Vmn2r23
P4ha3
Cyp2s1
Cd83
Cbfa2t3
Spata7
Tcim
Flrt1
Psd3
BC051142
Trim23
Trappc13
Shld3
Cda
Celf3
Cachd1
H6pd
Pou3f3
Smarcal1
Zfp41
Tnks2
Ajuba
Ppp2r2a
Mrpl33
Evi5l
Slc25a42
Sema6b
Fmc1
Bbs2
Dusp5
Nup107
Nrg1
Cnot3
Slc4a8
Ppp3ca
Chrna4
St6galnac1
Lrrcc1
Akap6
Ift46
Emcn
Mapk9
Tox2
Ubqln2
Spen
Ing3
Caml
Asf1b
Slc27a4
Pacrgl
Setd4
Man1a2
Cbr1
Purb
Cad
Txndc11
Lin28b
Rab18
Mfng
Rhob
Zdhhc2
Utp4
Snca
Derpc
Chtf8
Atp5g2
Arpp21
Kbtbd8
Rad9b
Sec22c
Muc6
BC107364
Spp2
Xpr1
Ptger2
H4c2
H4c1
H3c1
H1f1
Dbx2
Garre1
Vps41
Esrrg
Pex2
Ubp1
Zfp628
Vkorc1
Prss53
Gja10
Tph2
Nsg2
Scmh1
E130308A19Rik
Zkscan1
Dus1l
Lpar4
Itgb8
Gm14092
Tjap1
Rag2
Iftap
Ppp1r15b
Pik3r1
Angpt4
Ell
Mnx1
Aven
Rora
Marveld3
Map6
Rnf44
Gfod1
Ccdc154
Nme6
Josd1
Ifna9
Gtpbp1
Gbx2
Nr3c2
Eppin
Mrps36
Ccbe1
Phc2
Asap1
Gucy1a1
Nr4a2
Lpo
Kansl1l
Stk33
Agfg1
Mapre1
Mrps33
Osbp
Pyroxd1
Hes1
Tbc1d9
Add2
Ythdf3
Sos1
D630045J12Rik
Abca7
Zfpm1
Atic
Postn
Grpel2
Enpp3
Fzd3
Fbxo16
Emp3
Atp6v1g1
Znrf4
Mybpc1
Lrrc4
Aqp8
Adcy2
Zswim5
Mfsd10
Repin1
Gm5111
Rprml
Gpn3
Fam216a
Sertad4
Pfas
Ctc1
Alkbh5
Tbl1x
Coq7
Ccdc60
Pou3f2
Tshz2
Lama5
Tex14
Barhl1
Nebl
Tmem178b
Pakap
Gcc1
Sema6d
Dipk1a
Elavl4
Fbxw15
Adtrp
Srpk2
Lrrfip1
Dhx16
Traf1
Aebp1
Zfp672
Wdr6
Ormdl3
Nell2
Mvb12a
Gtf2ird2
Cd9
Sh3bp5
Mob3b
Ifnk
LTO1
Abr
Dpt
Sc5d
Ksr1
Syt2
Kcnip2
Prdm10
Wdyhv1
Prickle1
Sdhaf1
Fam135b
Kif21a
Hmox1
Rgs5
Gab2
Primpol
Casp3
C1qc
C1qb
Bmp7
Dnajb2
A630095N17Rik
Nms
Hoxa9
Ehbp1
Trrap
Wbp11
Hsp90b1
BC049715
Zfp689
Il5ra
Nedd9
Fgd4
Snap25
Slc25a25
Naif1
Cnot2
Zdhhc16
Exosc1
Tgif1
Fer
Lhpp
Ankrd40
4930550C14Rik
Dbx1
Olfml1
Ankrd6
Nrxn1
Slc38a2
Eef1akmt1
Crmp1
Fbxw25
Ogfod3
Mrfap1
Hexdc
Dnajb5
Crybg3
Vdac2
Spred3
Plaa
Narf
Ggn
Marchf10
Dcaf11
Rufy3
Dhrs7b
Grrp1
Eif3c
Nop53
Kmt5a
Nr2f1
Fgfrl1
Cntf
Elavl2
Rack1
Dad1
Abhd4
Rab28
Cables1
Hpgd
H2bc6
H1f4
Schip1
Actr3b
Nr2f2
Kbtbd6
Apela
Rtcb
Pbx1
Zfp334
Rarb
Casp7
Nrp2
Nr4a3
Sall1
Lrrc2
Ncf1
Gm14137
Gchfr
Supt6
Sdf2
Dennd5b
Art3
Snrpc
Eps8
Shisa3
Cxxc4
Exoc5
Ap5m1
Ctbp2
4933402D24Rik
Urm1
Fam222a
Cacna1c
Megf9
Btbd3
Smug1
Qrfp
St18
Cd96
Atp5l
Dcaf12
Arg1
Uts2b
Ngef
Neu2
Snx30
C2cd4a
Mpp3
Taf12
Spag9
Gm3448
Gm3417
Eif4g2
Pnoc
Angptl7
Thsd4
Vamp1
Tcf4
Dyrk3
Rnf4
Pdpn
Adam12
Foxp1
Msh5
Clic1
Crtam
C2cd5
Ptprj
Tspan5
Eci1
Bco1
Tmem100
Nt5c2
Klf3
Celf4
Actg1
Serinc1
Pmpcb
Tro
Slc35d3
Stk32a
Zbtb18
Ndufs5
Krt90
Tcf21
Srbd1
Haus4
Tfpt
Prpf31
Sema4b
Irf2
Snx15
Serpinb8
Cdk17
Ttc21b
Mef2c
Glis2
Natd1
Maf
Rpl3
Plch1
Alyref2
Mep1a
Bcas1
Ndst1
Zyg11b
Ikbke
Gse1
Nin
Sh3pxd2a
Nupr1
H3c11
H2ac22
Gapvd1
Efna3
Ap3m2
Lrrc4c
Nmnat3
Treml4
Sox5
Eri3
Arid1a
Ptn
Uchl4
Tfb1m
Eya2
Zfp608
Foxo3
Fgfr2
Rad18
Epb41
Cdk19
Zpbp
Zfp710
Spata48
Parp16
Cxxc5
Tcte3
Ermard
Runx1t1
Cntrl
Ankrd53
Wdr41
Ush2a
Slc9a8
Prkg1
Ndufs2
Gpr19
Adamts4
Tpbg
Ivl
D7Ertd443e
Sepsecs
Myo1b
Hapln1
Amer2
Nap1l4
Zc3h8
Rere
Hspa9
9030025P20Rik
Usp29
Scp2
Peg3
Nek9
Lsm6
Rnf111
Rbpms
Nfam1
Agk
Nlrp10
Eif3f
Rbpj
Ano3
Tubb4b
Epc1
Arrdc4
Percc1
Gphb5
BC003965
Jakmip2
Hoxd8
Sox1
Dcp1b
Tatdn1
Ndufb9
Glce
Trip4
Lrp12
Wdr76
Mfap1a
Gdpd5
Mtif3
Klhl5
Ccdc170
Foxd3
Snx5
Mllt10
Mgme1
Dnah5
Myo9b
Marchf4
Haus8
Cnot1
Enho
Dctn3
Arid3c
Tfdp2
Fignl1
Selenof
Hs2st1
Polr3gl
Nol6
Igf1
Fis1
Ankrd34a
Pclaf
Ddx39b
Slc25a51
Mbd3
Leng9
Dtx3
Cox20
Comt
Prickle2
Lpar6
D1Pas1
Mrpl4
Wipf1
Tmem60
Phtf2
Zfp664
Mn1
Ccdc92
Rap2b
Zfp536
Rcan2
Lck
Tmigd1
Smarca2
Mapk1
Ear10
Fndc3a
Srrt
Nfia
Pfkp
Gja1
Epn2
Eda
Clrn1
Stxbp5
Gm6588
Meox1
Krt20
Supt3
Bdnf
Igsf9
Rab40c
Limch1
Elk1
St7
Ppp1r9a
Zbtb24
Dct
Akirin2
Ints14
Alpk3
Adam7
Zfp512b
Mtmr6
Vmo1
Piwil4
Gltpd2
Fzd10
Tmem144
Rfx4
Map2
Fam13c
Cfl2
Btbd8
Ecpas
Cul3
Atp6v0e2
Aftph
Usp4
Zfp146
Hmx2
Rtn1
Cntn1
Gcnt7
Mprip
Zfp983
Acyp2
Srxn1
Stat5b
Msl1
Ptpre
Lama1
Micu3
Ip6k2
Smarcd3
Mapk6
Zfp521
Ddx3x
Pik3ca
Akain1
Slc9a6
Rai1
Prkag1
Ank3
Tjp1
Plxnb2
Nudt15
Fbln1
Rph3al
Kifap3
Caskin1
Atp5o
Arid3a
Rasal2
Vgll4
Usf3
Sp5
Tle1
Gpr12
H3c13
H2bc18
AB010352
D16Ertd472e
Tbc1d10c
Ppp1ca
Myt1
Mmp28
Flnb
Gpr1
Tmem107
Rhbdd1
Gm9376
Zfp708
Tcf12
Skor1
Gmnn
Dcn
Zfp84
Tmem11
Hrob
H2az2
Sec14l5
Pgk1
Parm1
Ube2o
Crebrf
Calca
Zfhx4
Samd4b
Gmfg
Vpreb3
Gm867
Tmem231
Npc2
Mtarc1
Isca2
Rps15a
Abcc4
Olfr102
Olfr100
Iglon5
Mtarc2
Klhl9
En1
Ubr2
Taf4
Slc25a39
Gtf3c6
Tcta
Rhoa
B3galt1
Ppp2r2d
Mapk1ip1
Fbxl7
Cdh9
Shisa9
Trim67
B3galt2
4921517D22Rik
Uba1
Psap
Zfp354b
Tyk2
Ski
Ranbp9
Ldhal6b
Xlr3b
Spink7
Rnf122
Fam117a
Abra
Tmed10
Smarcad1
Zmiz1
Pgbd5
Ackr4
Abcg2
Frmd4a
Trp53inp1
Nemf
Cacybp
Epb41l4b
Rab13
Ppan
Psmd5
Naxd
Fam160a1
Cutal
Arfgap2
Unc45a
Ufc1
Tdp1
Ssr3
Hddc3
Efcab11
Triobp
Spcs1
Lars
Glt8d1
Supt7l
Slc4a1ap
Gm5165
Gsx2
Puf60
Lbr
Kremen2
Palld
Lrtm2
Fam210b
Exoc1
Cacna2d4
Rps26
Nup210
Mlkl
Dab2ip
Crb2
Syt4