ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416194 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◣ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Ackr4
Gpr84
Hoxd4
Nkx6-1
Prdm13
Hoxa4
Scube2
Bend4
Aldh1a2
C1ql3
Gnat3
Met
Hoxb5
Hoxc4
Hoxc5
Hoxc6
Cacna1c
Ndnf
Gm973
Dcbld2
Dnah5
Pdlim5
Map4k5
Atl1
Eps8
Epb41l4b
Hdx
Clvs2
Lsamp
Pou3f2
Hoxa2
Hoxa1
Atp5g2
Hoxb4
Hoxb3
Zfp330
Lrp12
Atp1b4
Dph5
F11r
Hoxb6
Lrrc18
Marchf3
Vta1
Pou2f1
Hoxa5
Cldn34d
Epha5
Hoxd3
Nkx2-2
Rnf220
Smad1
Fam174a
St3gal2
Zfp503
Hoxa3
Hoxa7
Hoxa6
Lrrn1
Otp
Hoxb8
Hoxb7
Foxn3
Pknox2
Synpo
Fam181a
Zdhhc2
Ptger2
Mllt3
Krtap19-1
Slc31a2
Pbx1
Slc37a3
Abca16
Tle3
Hsdl2
Tob1
Polr3gl
Ankrd34a
Dbx2
Arfgef1
Gfra3
Slc27a4
Plcb4
Csrnp3
Spag17
Cacna2d1
Nr2f1
Cited2
Lpar6
Hoxd8
Tmem144
Sdc1
Raet1e
Raet1a
Sesn1
Cox7a2l
Hnrnpa1l2-ps2
Ccn1
Gm14092
Niban1
Myo10
Mecom
Wdr47
Zadh2
Tshz1
Mbp
Tnfsf8
Hibadh
Rtn1
Pik3cg
Enpp3
Lrguk
Notch1
P4ha3
Cemip2
Copz1
Usp15
Wdr49
Htr3b
Olfr1024
Ptger4
Dthd1
Olfr646
Frg1
Psd3
Apela
Zc3h12c
Krt222
Ankrd6
Nfib
Wnt5a
Angptl7
Clasp2
Trib2
Wdr78
Mier1
Tspan5
Fgfr2
Actg1
G2e3
Gcnt2
Cntnap2
Skap2
Wdr95
Hhat
Mapk8
Lemd2
Gsx2
Mad2l2
Draxin
Hnmt
4430402I18Rik
Oacyl
Irx5
Uchl4
Trio
Mbnl1
Map6
Lysmd3
Ubqln2
Vapb
Hand1
Scn1a
Myh10
Fbxw7
Tmco5
Zfp663
Cd47
Pgbd5
Olfr298
Phf6
Slc5a12
Ubtd1
Mms19
Gna13
Ammecr1l
Gpc6
Zbtb20
Sox2
Ppp2r2d
Mapk1ip1
Arid1b
Phlpp1
Olfr898
Cadm1
Adtrp
Atp8a1
4933402D24Rik
E130308A19Rik
Radil
Mnx1
Xpr1
Crb1
Angpt2
Lpo
Gdf10
Tle1
Tmem268
Pou3f3
Gbx2
Mrps33
H6pd
Akain1
Map4
Tnfsf13b
Kcnip2
Tspyl5
Treml4
Klhl5
Prickle2
Srrt
Shisa3
Sp9
Rhbdd1
Zfpm2
Naaladl2
Jakmip2
Gpr45
Fgf13
Camk4
Pof1b
Rara
Txlng
Comtd1
A430057M04Rik
Nap1l4
Spen
Atic
Elf5
Cul3
Foxp2
Grid2
Abcc4
Art3
Med13l
Nlgn1
Unc93a2
Stxbp6
Flrt1
Phactr3
Ptn
Hhip
Esrrg
Olfr1037
Rnase12
Rnase11
Cdx2
Bcar3
A930009A15Rik
Rgmb
Arl4c
Pbx3
Ezh2
Mgat5b
Kpna1
Gm5127
Zfand3
Dach1
Gm4951
Phox2b
Mapre1
Nin
Lrrc15
Rasal2
Zfp710
Fyn
Celf4
Olfr891
Nebl
Lars2
Mtif3
Ebag9
Ntn1
Cd3g
Cd3d
Nme6
Mapk14
Pdzph1
Map2
Gse1
Slc4a8
Hoxb2
Zfhx4
Nav2
Lpar4
Gm4737
Phc2
Schip1
Arpp21
Crybg3
Smim11
Gm9949
Adrb2
Itsn2
Il1rn
Kpna2
Lrrn3
Vamp9
Golgb1
Vmn2r23
Sstr2
2700062C07Rik
Rab27a
Man1a2
Arid3b
Ech1
Kazn
Zyg11b
Jam2
Ksr1
Zfp143
Foxp1
Rbm20
Ptprr
Hspa14
Cdnf
Trerf1
Cyp19a1
Rapgef6
Ncam2
Cd9
Git2
Ankrd13a
Skida1
Rorb
Pik3r4
Runx1t1
Fcer1a
Tnpo1
Fzd10
Cyp4f17
Lrrtm2
Tnrc6b
Serpinb8
Pik3r1
Fam222a
Twist1
Tcf12
Fstl5
C2cd4a
Rag2
Iftap
Ttc39b
Ccdc182
Tbc1d9
Aktip
Celf2
Txk
Nrg1
Mllt10
Entpd5
Bbof1
Ythdf3
Olfr960
Hapln1
Zfc3h1
Thap2
Fzd8
Kansl1l
Vgll1
Gtf2ird2
Tpbg
Cryzl2
Purb
St7
Trim2
Tcim
Elf2
Arid5b
Srsf9
Dach2
4930550C14Rik
Stra6l
Rgs21
Tshz3
Plch1
Pik3c2g
Neurod4
Dcc
Thbs1
Elavl4
Spink1
Fgfr3
Pitrm1
Lect2
Mmrn1
Gm14137
Dbx1
Olfr1
Igsf9
Adamtsl3
Meis2
Zfp9
C6
Sema6d
Tbx15
Reln
Megf10
Gli2
Lyrm9
Ccl2
Skap1
AB010352
Asic4
Ldlrad3
Pitpnc1
Uri1
Spag9
Ctnna3
Sema4b
Zc2hc1a
Arhgap15
Gdi2
Psme4
Tph2
Nrxn3
Sncaip
Gm4791
Rprml
Stk33
Xlr3b
Uts2b
Crb2
Neu2
Ngef
Mettl2
Stk32a
Wipf1
Spink7
Irx1
Dlk1
Nedd9
Pakap
Acot7
Megf9
Sfi1
Nepn
1700113H08Rik
Rnf165
Kank1
Nnmt
Lrrc4c
Dct
Pccb
Bcas1
Nipbl
Bbs2
Il31ra
Ing3
Sall1
Mtnr1a
Prkab2
Ccbe1
Olfr172
Tanc1
Eppin
Ints14
Tlk1
Klhl1
Oxnad1
Dph3
Dcp1b
Gja1
Skil
Nr6a1
Wt1
Olfr598
Zup1
Mmp28
Frem1
Ajuba
Id1
Lama5
Zfp933
Ccdc162
Cdh12
Lhfpl3
Cep85l
Adgrl3
Atxn7l3b
Muc4
Ubl3
Opcml
Qsox2
Sc5d
Kcnj16
Zdhhc7
Nup107
Ncaph
Stxbp5
St18
Gnb5
Galr3
Lrrc70
Hoxc8
Unc93a
Neurog2
Bcl2l10
Gabrg1
Slc44a3
Nipal1
Cnga1
Cfl2
Tia1
Smim18
Abl1
Bicral
Qrfp
Dab1
Havcr2
Nbdy
Fis1
Sytl2
Camsap2
Zfp608
Glrp1
Cxcr4
Pcnx
Got2
Tmigd1
Mycl
Slc26a7
Ascl1
Olfr1337
Cobll1
Msl2
Muc16
Clec7a
Hdac9
Tmem156
Kmt5a
Tjp2
Rbm25
Samd5
Tes
Ttr
Clstn2
Unc13c
Slc25a39
Rb1
Prtg
Trmt2b
Gpn3
Fam216a
Kbtbd12
Tbce
Rcan2
Gna12
Cblb
Sgms1
Tfap2a
Actn4
Dcdc5
Zfp473
Vrk3
Cdh7
Arg1
Meis3
Usp4
Gpx1
Prrxl1
Rgs8
Srbd1
Nptx2
Snca
Ccdc167
Sgpp1
Lin28b
Tet2
Pmpcb
Zfp41
Tti2
Ift27
Nxph3
Chchd6
Epc1
Ctdsp2
Ppp3ca
Igsf3
Cdk17
Oxr1
Slc9b2
Foxd3
Cd36
Tecta
Ankrd35
Rasl11b
Zkscan1
Gm15501
Ctbs
Fmr1
Plscr5
Zfp750
Irs2
Peak1
Hmg20a
Med30
Apol9a
Erbin
Zfp516
Krt20
Fam135b
Hmcn1
Crp
Stpg2
Dbi
3110009E18Rik
Pou1f1
Ngdn
Klri1
LTO1
Smyd3
Grb2
1700011L22Rik
Adam26b
AW551984
Baalc
St8sia2
Htr4
Cmtr1
Slc14a2
Aqp8
Rufy3
Gm15517
Vmn1r71
Ahi1
Gm1604b
Acot1
Itga4
Sytl3
Gfra1
Tm4sf4
Xrcc5
Sgce
Peg10
Ppp1r14a
Mybpc1
Cldn1
Baz2b
Chsy3
Dpt
Dusp11
Cog6
Fgd4
Kcnj8
Taf9
Rad17
Ak6
Abca6
Tfrc
Mb21d2
Asb4
Gm33989
Ptpn4
Ppp2r2a
Tle6
Grpel2
Ccdc60
Capn15
Sdr42e1
Arfgef3
Tmem47
0610009B22Rik
Traf1
Asah2
Cyp51
Wdfy1
Scmh1
Son
Gart
Abr
Alyref2
Nell2
Cd2ap
Prdm6
Dtnbp1
Thrb
Kif26b
P4ha1
Pik3c2a
Tubg1
Retreg3
Traf3
Ptch1
Rab37
Cttnbp2
Nsfl1c
Btbd8
Tmem132b
Fbln1
Calcoco1
Olfm1
Mideas
Olfr1098
Exoc7
Palld
Olfr1097
Kif21a
Pex2
Dusp4
4930474N05Rik
Marveld3
Hes3
Gchfr
Limch1
Bnip2
Arhgap10
Prrc1
Syncrip
Fbxl18
Tfdp2
Kmt2a
Kpna4
Tox2
Setd1a
Grik3
Cdca8
9930104L06Rik
Ckb
St8sia5
Rfx4
Tstd2
Ncbp1
Nr4a3
Ush2a
Spock3
Snx1
Ciao2a
Ghr
Sprr2i
Spp2
Pcnx3
Map3k11
Klb
Eloa
Rhox2b
Prpf4b
Vps41
Ccdc154
Pax8
Pcsk6
Ntng2
Laptm4b
Rarb
Agr2
Cluap1
1700037C18Rik
Igfbpl1
Tmed10
Ccno
Ppp1cb
Fbxl3
Dpysl2
Lingo1
Ntf3
C2cd5
Marcks
Kcna5
Ptpre
Ppm1e
Hsbp1l1
Cwc27
Arl13a
Plekhf2
Spats2l
Adam7
Rabggtb
Fbxl2
Smarcal1
Msh4
Prdm12
Adgrl4
Taar2
Taf12
Mutyh
Cyria
Iqschfp
Iqcj
Lrrc42
Hspb11
Klhl9
Pcdhgc5
Pcdhgc4
Bmpr1b
Eya2
Aebp1
Scn4a
Krt9
Mpped2
Sox6
Zbtb18
Pip4k2a
Zfp712
Abhd6
Pank4
Hes5
Ranbp9
Tpm3
Dtx3
Clcn4
Tom1l1
Myct1
Pla2g2d
Dchs1
Kcne1l
Maco1
Cds2
Igf1
Ncam1
Paqr5
C1ql1
Mfap3l
Elmo2
6330403K07Rik
Glipr1l3
Caps2
St8sia4
Lrp8
Slc4a10
Cdh6
Ube2cbp
Dop1a
Meig1
Dclre1c
Tafa5
Dmrta2
Hs3st4
Galk2
Cops2
Htr2b
Snx7
Tmem100
Sema3c
Prickle1
Ppfibp1
Clasrp
Sgk3
Slc35d1
Rest
Rps11
Rpl13a
Clcn3
Onecut1
Golm1
Trappc11
Rwdd4a
Tbcel
Olfr535
Primpol
Casp3
Agk
Plxnc1
Robo2
Bcor
Olfr622
Cyp7a1
Ablim1
Stox2
Ptprj
Rab30
Racgap1
Ogdhl
Frmd6
Rubcn
Fyttd1
Nr2f2
Ermn
Spred1
Egr2
Psmg2
Cep76
Olfm3
Reck
Ncf1
Slc30a5
Ubn2
Tjp1
Scgn
Ndufaf2
Ercc8
Lrrc58
Gm36028
Ppp1r37
Itgb8
Tnks2
Trim23
Trappc13
Shld3
Cenpu
Ccnd1
Toporsl
Dus1l
Tmtc2
Gbp2
Piwil4
Adgrb3
Narf
Rpp25
2610528A11Rik
Shroom2
Acaa2
Cacnb4
Fbp1
Hunk
Dipk1c
Mlkl
Tnc
Spry1
Hs3st3b1
Edil3
Nlrx1
Rbm33
Ttc21b
Tmx4
Znrf4
Rnf7
Ddx6
Ctbp2
Kcng4
Maf
Zfp1
Bcl11a
Zfp664
Ccdc92
Th
Trappc4
Rps25
Cybrd1
Tmem126b
Zfp661
Mrps5
Cpsf4l
Ccdc174
Nmnat3
Exoc6b
Phf12
Nrp2
Nudt4
Plekha5
Zfyve27
Zfp397
Wdr92
Pno1
Prmt6
Etv3
Tmem154
Arhgap36
Ins1
Prl7c1
Ptprd
Col16a1
Olfr594
Elk1
Phyhipl
Olfr16
Folh1
Mcoln1
Pdia5
Washc4
Gng4
4930402H24Rik
Gast
Gm2237
Cox20
Gm17660
Hoxa9
Vcl
Ptp4a1
Antxr2
Nt5c2
Sulf1
Sumf1
Akr1c14
Rcn1
Nsg2
Eif5
Atp13a3
Tssk5
Mroh1
Kmt2e
Ppm1k
Sez6
Ranbp3l
Samhd1
1700016H13Rik
Cntn1
Id2
Mapk9
Mrpl45
Iqsec3
Ndst4
Brpf3
Gm3448
Gm3417
Rab18
9030025P20Rik
Prokr2
Nacc2
Frmpd1