ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416180 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◣ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Ackr4
Zfp330
Map4k5
Atl1
Pdlim5
F11r
Abca16
Lrrc18
Prdm13
Slc5a12
Bend4
Tmem268
Irx1
Hoxd4
Scube2
Olfr646
Wdr18
St3gal2
Polr3gl
Ankrd34a
Lrp12
Lrguk
Cacna1c
Dcbld2
Hsdl2
Lsamp
Gm973
Ttr
Gpc6
Slc31a2
C1ql3
Slc37a3
Otp
Atp8a1
Atic
Eps8
Met
Dbx2
Pitpnc1
Abcc4
C6
Marchf3
Prickle2
Tcim
Ccno
Cntnap2
Gpr84
Gnat3
Dnah5
Grpel2
Ndnf
Ppm1e
Olfr172
Fam174a
Atp5g2
Nkx6-1
Gfra3
Gm14092
Aldh1a2
Coq10a
Phc2
Myh10
Sgms1
Krtap19-1
Zfp710
Arfgef1
Map4
Ncf1
Gdf10
Ptger2
Smad1
Hoxa4
Mapk8
Cemip2
Slc27a4
Ptn
Nlgn1
Slc25a39
Cited2
Hdx
Sesn1
4430402I18Rik
Rasal2
Olfr298
Trim2
Foxn3
Tmco5
Wdr47
Mmrn1
Nin
Angptl7
Esrrg
Pitrm1
Krt222
Pgbd5
G2e3
Dph5
Pik3c2g
Rbm7
Gm5617
Copz1
Hnmt
Pou2f1
Pou3f2
Ubqln2
Atp1b4
2700062C07Rik
Lemd2
Ntn1
Spag17
Spag4
Wt1
Tnpo1
Lpgat1
Vta1
Ccdc162
Narf
Dcdc5
Zdhhc7
Gtf2ird2
Niban1
Ccn1
Pou3f3
Cdca8
9930104L06Rik
Mbp
Srrt
Olfr1024
Hoxd3
Synpo
Ezh2
Lrrn1
Olfr891
Trib2
Stk33
Hand1
Mllt3
Notch1
Tob1
Emcn
Id1
Tcf12
Mprip
Tnfsf8
Maml3
Hoxb5
Pbx1
Hoxa2
Hoxa1
Nfib
Cdk17
Smim11
Epha5
Snx1
Ciao2a
Tle3
Ptger4
Cd47
Mapre1
Map6
Crybg3
Hoxc5
Ankrd6
Nr3c2
Schip1
Rgs21
Hibadh
Ammecr1l
Rtn1
Treml4
Mecom
Hoxc4
Clstn2
Hoxc6
Hoxa3
Hoxa7
Runx1t1
Hoxa6
Zfp42
Hoxb8
Hoxb7
Fgf13
Zfp503
Plch1
Zdhhc2
Frg1
Jakmip2
Pum1
Ksr1
Agk
Sox6
Ppp2r2d
Mapk1ip1
Cox7a2l
Tmigd1
Plcb4
Fbxw7
Trio
Pik3r4
Med13l
Lpar6
St8sia2
Psd3
Wnt5a
Mrps33
2610528A11Rik
P4ha3
A930009A15Rik
Pknox2
Galr3
Olfr898
Slit3
Tle1
Hoxb4
Hoxb3
Clasp2
Srbd1
Nap1l4
Clvs2
Xpr1
Ddx6
Cdx2
Lars2
Slc39a11
Rgs5
Hsbp1l1
Olfr1037
Epb41l4b
Gna13
Cdh7
Lrrtm2
Htr4
D1Pas1
Slc35d1
Slc39a2
Lect2
Radil
Tbx15
Klhl5
Ccdc182
Cmtr1
Gm15501
Angpt2
Itsn2
Abca6
Spink7
Nup107
Gsx2
Naaladl2
Tmem156
Cux2
Thbs1
Nedd9
Sox2
Ubl3
Elf5
Vmn1r71
Rhbdd1
Tpbg
Zup1
Cds2
Arhgap10
Phox2b
Sncaip
Nol4l
Fgfr2
Zfp663
Usp4
Gpx1
Gcnt2
Mnx1
St7
Hoxa5
Mad2l2
Draxin
Lrrn3
Fer
Kcnip2
Shisa3
Rprml
Fam181a
Hmcn1
Serpinb8
Actg1
Gm4791
Kbtbd12
Fzd8
Gse1
Nnmt
Thsd4
Usp35
Kctd21
Lin7a
Sertad2
Zadh2
Tshz1
Golgb1
Zyg11b
Bmpr1b
Gm5127
Tbc1d9
Irx5
Cyp4f17
Cfl2
Tmem87b
Pbx3
Ccser2
Gpr45
Cul3
Oxnad1
Dph3
Hs3st3b1
Nell2
Tnfsf13b
Zkscan1
Adgrv1
Cd9
Fau
Tom1l1
Fcer1a
Gm4737
Lyrm9
Nat8
B3galt2
Igsf9
Kazn
Lysmd3
Vps41
Acot7
Ubl4b
Stra6l
Art3
Dach1
Ythdf3
H6pd
Skil
Gnb5
Cibar2
Irs2
Pdzph1
Cwc27
Actr3
Kcnj16
Uri1
Ajuba
Rnf165
Trmt2b
Fgfr3
Zc2hc1a
Nkx2-2
Spp2
Unc13c
Elavl4
Crb1
Stxbp5
Mbnl1
Pex2
Nsun3
Vapb
LTO1
Ebag9
Lce1c
Unc93a2
Nrg1
Gm14137
Dpysl3
St8sia4
Dact2
Cldn10
Hoxb6
Rab30
Zfp143
Defb18
Prnp
Prn
Crppa
Col4a2
Snca
Slc9a9
Serpinb13
Apela
Ccdc167
Bcas1
Slc9b2
Cacna2d1
Pof1b
Lama5
Vgll1
Ing3
Wipf1
Git2
Ankrd13a
Akain1
Megf9
Sstr2
Tjp2
Cyp51
Lpar4
Sntb2
Glrp1
Baalc
Mcm6
Dscaml1
Hoxd8
Nr2f1
Tecta
Prrxl1
Olfr960
Fis1
Sertad4
Grik3
Lrrc70
Sprr2i
Wdr49
Caap1
Tmtc2
Ermn
Rpl34-ps1
Rpl34
Itga4
Spink1
Hes3
Tlk1
Prrc1
Dpysl2
Tmem144
Cd83
Smim18
Drd2
Pcnx
Csrnp3
Josd1
Gtpbp1
Oacyl
Stk10
Iqgap1
Fbxl3
Kansl1l
Hhip
Sdha
Ccdc127
Cryzl2
Pla2g2d
Pip4k2a
Ppp1r3e
Olfr622
Vdac2
Arpp21
Flrt1
Mycl
Qrfp
Klhdc9
Foxp1
Taar9
Zfp473
Vrk3
Myo10
Zc3h12c
Nsg2
Spred1
Nrp2
Kpna4
Wdyhv1
Arhgap15
Jam3
Ptpn4
Nepn
Foxp2
Cep85l
Nr6a1
Spock2
Sos1
Gsg1l2
Glp2r
Tmem154
Rnf220
Trerf1
Tbcel
Rnase12
Rnase11
Foxd3
Mast2
Ankrd35
Mfsd10
Slc16a7
Fry
Pds5b
Zmiz1
Primpol
Casp3
Crp
Psme4
H2bc8
H2ac8
Nnt
Ppp1ccb
Zfpm2
Ranbp3l
Rgmb
Pax6
Csta1
Celf4
Apcs
Gm12789
Mrps18c
Helq
Exoc6b
Gm27021
Emc8
Cox4i1
Scn1a
Ppp1r14a
Nebl
Lrrc15
Atg4c
Meis3
D7Ertd443e
Slc38a2
9930021J03Rik
Apip
Hhat
Lama3
Olfr1366
Hnrnpa1l2-ps2
Frem1
Cblb
Prrx1
Flvcr1
Zc2hc1c
Acyp1
Phf6
Jam2
Ski
Rbm47
Rab27a
Grid2
Dct
C2cd4a
Fbxl2
Rb1
Sema6d
Purb
Phldb2
Psma8
Atxn7l3b
Sh3bp5
Mtif3
Dennd1b
Olfm1
Pdia5
Hoxc8
Ccl2
Abra
Arid5b
Snx7
Fmo2
Slc35d3
Gm4952
Unc93a
Elf2
Nipal1
Cnga1
Slc44a3
Dach2
Scn4a
Spock3
Olfml1
Aktip
Dbx1
Vamp9
Capn15
Tia1
Gtf2e2
Marveld3
Ear10
Trpc7
Maob
Gnao1
Lpo
Traf3
Vmn1r236
Gnas
Ttc21b
Etv3
Taf12
Dclk3
Gja1
Eif4e3
Neurod4
Cln5
Ivl
Ncam1
Man1a2
Ormdl3
H2ac10
H4c8
Col25a1
Tspan5
Prl7c1
Kcnmb3
Fzd10
Sema4b
Cntn3
Spag9
Papss1
Cyp19a1
Xlr3b
Cda
Cdh12
Ins1
Crb2
Trim23
Trappc13
Shld3
Ttc39b
Ireb2
Raet1e
Raet1a
Tfap2a
Gm15517
Srsf9
Marcks
Tbca
Zfyve27
Eya1
Slc9a6
Skida1
Snx6
Mn1
Reln
Il1rn
Rnf103
Igfbpl1
Prdm12
Fyn
Dmrta2
Nipa2
Zeb2
Pdp2
Fbxo30
Camk4
Zbtb20
Neurog2
Mef2c
Fmr1
Rcan2
Olfr1098
Htr3b
Enpp3
Eya2
Meig1
Dclre1c
Pyurf
Lrmp
Bcor
Olfr957
Ccdc60
Cbfa2t3
Poglut3
Clrn1
Txlng
Sdc1
Smarcal1
Asic4
Zfhx4
Rps23
Hbb-bs
Hbb-b1
Akap6
Actr3b
Plppr1
Mmp28
Acvr1c
Plxna4
Clasrp
Krba1
Stox2
Tti2
Ccdc88c
Aff3
Entpd5
Bbof1
Tshz3
Ust
Bhlhe22
Plppr4
Dgkh
Prdm6
Map2k6
Supt6
Sdf2
Eppin
Chpt1
Ncam2
Sp8
Arid1b
Pth1r
Pakap
Ercc5
Itpk1
Itgbl1
Bcl2l10
Pik3cg
Hus1
Tfdp2
Slc25a24
Eogt
Nr2c1
Piwil4
Zfp516
Vmn2r23
Kcng4
Zfp712
Ngdn
Pfkp
Ptpre
Tnrc6b
Ctdsp2
Zmat1
Phactr3
Srsf10
Gcc1
Ppp1cc
Megf10
Scmh1
Utp4
Derpc
Chtf8
Atp13a3
Baz2b
Akt2
Cfap36
Zfp397
Ndst4
Sptssa
Arl15
Hoxb2
Slc39a10
Mamld1
Sipa1l1
Zbtb16
Tm2d2
Adam9
Ccnd1
Arl13a
Prkag2
Zdhhc21
Hecw2
Prkab2
Krt84
Sytl2
Slc4a8
Sgpp1
Pigk
Hip1r
Arfgef3
Cdhr3
Dync1i2
Fam168a
Cnn3
Gm4553
Cobll1
Sybu
Reck
Mrps36
Cox20
Adam12
Mapk14
Pdia6
4930550C14Rik
Slc35a1
Oxr1
Igsf3
Mgat5b
Cd36
Olfr1368
Nipbl
Cog6
Taar2
Sall1
Hoxa9
Crispld1
C2cd5
Rere
Gbx2
Sc5d
Cnbp
Mutyh
Ccdc30
Tstd2
Ncbp1
Nes
Pccb
Gng4
Ints14
Skap2
Zfp664
Ccdc92
Gna12
Maco1
Abca5
Plxnc1
Ptprj
Nme6
Lin28b
En1
Zfp9
Dennd5b
Cep57l1
Map2
Wdr6
Epc1
Asb4
Rag1
Ahi1
C1ql1
Pik3r1
Ptprr
Cnot2
D130040H23Rik
Spin4
Plaa
Ppfibp1
Mns1
P4ha1
Nms
Ranbp9
Ifitm2
Ptprt
Ctbs
Cep152
Nbdy
Celf2
Fank1
Dhx32
Hunk
Lrif1
Neu2
Ngef
Plekhf2
Ldhal6b
Zdhhc19
Slc30a4
Myf5
Tjp1
Rragd
Qsox2
Zar1
Onecut1
Arntl
Pax9
Ppp3ca
Slc35c1
Cpvl
H4c11
Ip6k3
Speer4b
Ywhae
Uchl4
Tjap1
Grpel1
Kbtbd3
Dmbt1
Ush2a
Fhdc1
Aqp8
Tspyl5
Arhgap36
Thrb
Zfp827
Ifna9
Lrrc4c
Pou1f1
Tssk5
Mroh1
Pkp2
Morf4l1
Cux1
Olfr535
Ppp2r2a
Comtd1
A430057M04Rik
Zbp1
Ptgdr
Mllt10
Filip1l
Mydgf
Rbm25
Arg1
Gja10
Rusf1
Mthfd2
Gask1b
Olfr933
Aprt
Znrf4
Plaat1
Rara
Gm4951
Pbx4
Nhlh2
Ch25h
Prkacb
Krt9
Lgals2
Fgf10
Gab2
Capn7
Slc30a5
Adgrl2
Dntt
Foxa2
Peli1
Synpo2
Mtnr1a
C2cd4b
Pcdh17
Tcerg1
Ccer2
E130308A19Rik
Glipr1l1
Shisa9
St6galnac1
Gm3383
Mettl2
Aven
Zic5
Ccdc154
Ptbp3
Actn4
Ptp4a2
Ndufaf2
Ercc8
Stxbp6
Fam163a
Dlec1
Nmnat3
Dlk1
Limch1
Prkra
Pjvk
Olfr808
Vipas39
Ahsa1
Car14
Aqp9
Brpf3
Hsp90b1
1810010H24Rik
Myct1
Sgce
Peg10
Riiad1
Atoh7
Tas2r118
Olfr421-ps1
Olfm3
Sgk1
Angel2
Trak2
Tex14
Mybpc1
Tbce
Meis2
Hapln1
Lmo3
Frat2
Hdac9
Bche
Ago1
Rccd1
Tmem132c
Slc25a17
Degs1
0610009B22Rik
Stim2
Gpr1
Vmn2r83
Nek9
Camsap2
Hoxd9
Cpsf4l
Adam7
Nptx2
Ctbp2
Shroom2
Hnrnpa1
Cbx5
Sh3pxd2a
Kitl
Ahr
Gmnn
Mfng
Igfbp3
Son
Gart
Olfr1118
Cer1
Kmt5c
Lyst