ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX14276667: 293

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

KIF5C
MAMDC2
RGPD2
RGPD1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MRPL21
IGHMBP2
MTRNR2L9
COL23A1
STMN3
RTEL1
PMF1-BGLAP
PMF1
ZBTB45
SLC27A5
SUGCT
MPLKIP
MTRNR2L1
CCDC97
DPY19L4
TBC1D19
ACSF3
WDR74
STX5
USP30
NME1
ZMPSTE24
TMCO2
STX16
EMILIN2
AAR2
EIF1AD
CST6
BANF1
MTBP
MRPL13
UBE3B
KCTD10
CSTF2T
ZDHHC6
VTI1A
RAD54L2
ZNF276
VPS9D1
OTUD7B
MAN2C1
GOLGA3
GTF2H2C
GTF2H2C_2
MUC3A
CCDC57
DUX4
STX18
PEMT
ZNF408
ARHGAP1
MAIP1
DUS1L
RTTN
BMS1
TARS2
FEM1B
EIF3F
ISY1-RAB43
ISY1
MED23
WDR83OS
WDR83
MAN2B1
REXO4
ADAMTS13
GTF2H2
NR1H3
ACP2
SUPT7L
SLC4A1AP
ITGB3BP
EFCAB7
SLC35A3
RNF6
DCP1A
GTF3C5
AFAP1
MRPL44
TMEM262
BBS1
TMED9
B4GALT7
FRA10AC1
PTPRN2
SEC13
NUDCD3
NUPR2
CHCHD2
VPS13B
SLC33A1
TM9SF1
IPO4
SMG8
EDC4
SNX16
ZNF296
GEMIN7
NOL12
ZNF561
ZNF165
OR1F12
ALKBH3
SLC24A1
NDUFS7
TMEM41A
NDUFS3
KBTBD4
FAM180B
DCAF10
WDR24
STUB1
JMJD8
ADPRHL1
PDE6D
COPS7B
TACO1
PSMG3
NDUFB3
FAM126B
UBA5
ACAD11
HUS1
VPS52
RPS18
B3GALT4
POLD1
NR1H2
MLEC
CGGBP1
C3orf38
CCAR2
C8orf58
RFXANK
BORCS8-MEF2B
BORCS8
INTS12
GSTCD
HEMK1
C3orf18
LOC102724770
DGCR6
HMGB1
USPL1
MRPL48
PTPN21
DMAP1
TTC4
SCAND1
NOL8
CENPP
CDK5RAP1
MRPL1
ALG10B
NOXA1
COX16
ZNF770
WDR11
HDAC8
MRPS31
WBP1
INO80B
TRIM48
ZSCAN22
RRP15
PHB2
RPS5
EXD2
STOML2
PIGO
FAM214B
COMMD2
PSMF1
TEDC1
CRIP1
TOP3B
RBBP5
AURKAIP1
NOP16
HIGD2A
TRIP4
PCLAF
SENP1
PFKM
METRN
HAGHL
CCDC78
ANTKMT
PSD
FBXL15
PIH1D2
NKAPD1
MRPS18C
HELQ
NMNAT1
LZIC
MRPL40
HIRA
C10orf88
FAM207A
GFM2
TMEM222
TNPO3
MNAT1
GTPBP3
ANO8
MRPL3
SLC39A4
CPSF1
POLR3B
SF3A3
ZNF791
ZNF490
ZNF391
WNK4
VPS25
BLOC1S6
DSTYK
MKRN2OS
MKRN2
C11orf49
GMEB2
TIGD1
EIF4E2
DRG2
TVP23B
MRPL30
MITD1
TEX38
ATPAF1
BCAT2
TATDN3
NSL1
UTP3
MST1
MRPL16
NDUFC2-KCTD14
NDUFC2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
GTF3C3
C2orf66
ZKSCAN8
ZNF302
WDR97
MAF1
CYC1
CPPED1
AQR
FAM98B
GALK2
COPS2
SPAG8
HINT2
SLC39A13
SELENOH
STARD3
PPP1R1B
ZNF205
LSG1
YIPF2
TIMM29
MEIG1
DCLRE1C
TSPAN10
NPLOC4
HNRNPA1L2
YBEY
MCM3AP
SMG7
SLC25A53
FAM199X
THEM4
VPS45
CLK3
SNAP47
JMJD4
LRRC49
THAP10
CYREN
FAM227B
DTWD1
PEX3
ADAT2
NSFL1C
MTERF4
COQ3
MTOR
PUS10
PEX13
TRUB2
COQ4
FBXO22
MRPS22
RPL37
CARD6
METTL9
YIPF3
POLR1C
LRRC73
TEFM
AGK
OGFOD2
ARL6IP4
TOR1AIP2
TOR1AIP1
BRF2
TXN2
TIMM9
KIAA0586
FAM228B
TP53I3
SF3B6
PLEKHM3
TRDMT1
CFAP298-TCP10L
CFAP298
ZER1
EIF2D
PCYT1A
RPS7
SNRPD3
GUCD1
C18orf21
PDXK
TMEM101
DDX1
RPL29
SPSB3
NUBP2
NME3
MRPS34
EME2
RUVBL1
EEFSEC
STPG3
NELFB
FAM166A
MARK3
TMEM69
GPBP1L1
NUDT5
CDC123
SSBP1
NUP54
MPHOSPH10
MCEE
SLC44A1
WDR31
BSPRY
MTIF2
PIGL
NCOR1
SAR1B
VARS2
GTF2H4
SLC39A3
TDG
C12orf73
LTN1
DLST
ZNF285
TUT1
MTA2
NUF2
ALG10
PPIL3
NIF3L1
TMA16
BANP
PPIL1
C6orf89
PDCD6
PCID2
CUL4A
CACNB2
RGS14
LMAN2
WDR36
TBC1D13
TMEM242
ZNF581
ZNF580
CCDC106
ZBTB11
RPL24
KLHL20
ERI1
CCNC
FAM118A
MRPL58
MTRNR2L10
LAS1L
DHX33
NXT2
GRPEL2
RAG2
PLD4
IFTAP
ANAPC5
SREK1IP1
CWC27
OPRL1
RGS19
LKAAEAR1
CACNG8
PRRG2
NOSIP
INTS5
GANAB
WDR25
WARS1
SNRPB
DNAJC25-GNG10
DNAJC25
NAA20
TTC26
TMEM68
TGS1
ZBTB33
ZNF229
YY1
MTMR9
ZNF195
ZNF207
C17orf75
ZNF461
GSTT2B
DDTL
DDT
GSTT2
METTL15
KIF18A
SEC11A
RFC4
C16orf46
PPIP5K2
KCTD5
PTPRM
VWA8
ZNF562
DNAJC24
DCDC1
ZC3HC1
RAB18
MTRF1
H2AX
DPAGT1
C2CD2L
ERCC6L2
FRG2C
MED18
EMC4
FOLR1
MRPL39
ANKRD40
TSSC4
SRP19
MAP2K5
KRR1
PHKA2
TYW1B
YJU2
CCDC200
TRAPPC10
SIT1
ZNF846
CNPY3
NKAP
NEU3
SLC25A21
EAPP
COA6
ZNF564
TM9SF3
ACBD6
SEPTIN4
MTMR4
DPP9
SDHAF3
MTHFD2L
FAM168A
TSPO
MCAT
TYW1
SBDS
ZNF410
LSM5
AVL9
SEC22B
NFKBIL1
DDX39B
ATP6V1G2
RNF39
PPP1R11
POLR1H
UBIAD1
ZSCAN12
TIGD6
HMGXB3
OSGIN1
SPCS1
GLT8D1
SMIM26
MBTPS2
FBXW8
PSMC2
DNAJC2
MFAP3
FAM114A2
NUDT4B
NUDT4
ZNF623
LIG4
ABHD13
DNAJB12
GFM1
MRPL53
MOGS
SPATA5L1
GATM
CLOCK
CAP1
ZSCAN10
RSPH3
TMEM30A
SMIM19
SLC20A2
RBM28
VIPAS39
AHSA1
PUM3
AGO3
TMEM249
SLC52A2
FBXL6
ZNF622
ZSCAN9
PRORP
PPP2R3C
RPS20
KNSTRN
EHD2
AP5Z1
UQCC1
SH2B1
TUFM
MTG1
ZBED9
FBXW11
LRRC58
GORASP2
TUBGCP3
EXOSC3
CBLL1
TAF12
PRSS27
TDP2
ACOT13
NVL
USP21
UFC1
ATG5
SNRNP200
TMEM199
SEBOX
POLDIP2
PTPN6
C12orf57
TTC14
ZNF549
MAGEF1
ZKSCAN4
NKAPL
ALDH3A2
MTR
TMEM128
CDC16
SLC22A18
CDKN1C
ZNF596
C21orf91
LRRC24
C8orf82
TXNDC9
EIF5B
PRKAB1
PSMD6
TTC23L
KIF22
GPAA1
EXOSC4
PYURF
PIGY
HERC3
SPDL1
JRK
UNC50
COA5
TPD52L2
ABHD16B
PROSER1
NHLRC3
NOTCH2NLC
NOTCH2
COPS4
METTL6
EAF1
CARD8
SAMD1
MISP3
C19orf67
POC5
ZNF668
ZNF646
PSME3
BECN1
STMP1
JAG2
RSL24D1
TBX15
PDCD6IP
MLLT11
CDC42SE1
DISP1
LCORL
DCUN1D5
PARP16
DDX21
WDPCP
MDH1
NUP153
NUP107
SEC16B
MKRN3
POLDIP3
PDCD2
GABPA
ATP5PF
FRG2
RPS4Y1
ZNF579
OPA1
TEX9
RFX7
TMEM107
C8orf33
NSUN4
IPPK
PPID
ZNF558
ZNF570
ZNF569
ZNF696
DPH7
NGB
PRR35
PIGQ
NHLRC4
FBXO28
C1orf198
ECHDC1
VIM
ABCB9
SIRT4
USE1
LSM10
LRRC8A
KYAT1
VPS26C
NFIB
SRSF7
CCDC152
ACSL3
FBXW2
FKBP3
FANCM
CSTF2
NOTCH2NLB
NOTCH2NLA
SLC35B2
HSP90AB1
ARL4D
MMP8
C4orf3
EIF3D
NDUFA12
SDR39U1
STK3
RPL27A
H4C14
H3C15
H3C14
H2AC19
H2AC18
MVB12A
CD68
SPATC1L
VAMP2
C8orf76
H4C15
GAS8
SUGT1
PSMD11
NDRG1
PNPO
SPAAR
HRCT1
SCRIB
MPDU1
LOC100996842
TOMM22
NIPBL
KIF2C
RAD23A
CALR
FIP1L1
INVS
ERP44
OSGEPL1
H4C12
H4C11
H2BC14
H2AC14
GOSR2
MANBAL
ADAMTS9
SPATA6L
PLPP6
GPR137
NOP2
ZBTB4
SLC35G6
RXYLT1
POLR2A
PER1
EIF3H
SOX15
KLHL9
SNRPD1
PRPF18
NCBP2AS2
NCBP2
ZNF35
NFKBIZ
PCDH9
NBPF1
TTLL12
ABRAXAS1
DTD1
SLF1
KIAA0825
LINGO1
CCNL1
CALM1
GNG14
SLC35C2
CLCC1
VPS36
SRBD1
CKAP2
RPS2
RNF151
FUBP3
EFR3A
SELENOK
ACTR8
ZCCHC7
SRSF2
MFSD11
HIPK1
CCN2
DDX18
ATF6
TPRKB
PRDX1
WDR4
MFSD14A
MCL1
EIF4A3
RARS1
NCAPD2
MRPL51
ETV5
GLO1
JPT1
EBAG9
APTX
RPS27
RAB13
SLC30A6
DBF4B
ARID4A
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
RPLP1
LYSMD1
SLC9A1
EFHC1
MTAP
CHIC2
CCDC38
AMDHD1
H3C13
H2BC18
RPS6
JOSD2
ASPDH
LYPLA2
GALE
BBS10
TARS3
ARHGAP29
TRAM2
RHOB
GOLPH3
CCL3
CAST
RREB1
DIS3L2
CLTA
LRRFIP2
RMDN2
POLR2J3
KMT2A
GOLGA6L10
SYNGAP1
CUTA
KAT6A
EIF4A1
ADAR
KIAA0100
TUT7
STAT1
SLC50A1
DPM3
TANK
TM2D3
KIF23
HP1BP3
PLEC
STAU1
DDX19A
CMC1
ADPGK
POLR2M
CCDC14
POLR1B
S100A10
GLI4
LMNA
TLCD5
HSPBP1
BRSK1
SARAF
PRPF3
CCDC107
ARHGEF39
APMAP
PHGDH
ZC3H10
RPL41
PIGC
C1orf105
ATAD2
SLC3A2
FOS
STYXL1
RCC1
MDH2
CEP350
UAP1
GOLGA6L9
MAPKAP1
HERPUD1
SMARCC1
ETV4
PDE4D
LATS1
INTS9
HMBOX1
ZBTB6
RC3H2
ZNF101
GABARAP
ELP5
CTDNEP1
C15orf61
ATP13A1
STK17A
ZNF669
WTAP
SOD2
MRM1
GGPS1
DHRS11
ARID4B
ZNF197
CCDC22
CACNA1F
THAP9
SEC31A
MAT2A
DBNL
CTR9
ZBTB40
SSNA1
IMPACT
H2BC21
H2AC21
H2AC20
ANAPC2
UGGT2
SPTAN1
ELAVL1
LRRC37A3
DYNC1LI1
PCIF1
NXF1
ZNF326
TSSK6
NDUFA13
KRTAP29-1
KRTAP17-1
KRTAP16-1
EIF4G2
XBP1
PPIF
NBPF15
JOSD1
GTPBP1
DCBLD2
RNF10
COQ5
ANO10
ABHD5
VPS53
UBLCP1
TSPOAP1
MRPL54
GADD45A
APBA3
UBE2S
IPO7
PSMD3
WDR48
WDR43
TMEM50B
SCN11A
RPL6
PTPN11
PERP
MAN1A2
CDC42BPA
GEMIN2
ARL6IP1
PDE4DIP
AKAP13
TMX4
PABPC4
ELMOD2
ZNF768
ZNF747
SDCCAG8
FAM133B
CEP170
WDR37
PGAM5
IDI1
ASPH
ZNF697
MDM4
HNRNPAB
AHR
HEATR6
SEC61G
MED1
CDK12
SSRP1
SNAPC3
P2RX3
GMFB
RHOT2
RHBDL1
JAK1
CCZ1B
UNC45B
NLE1
FBXL2