ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX431474 | Hep 3B
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◣ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

DUX4
FRG2C
MAMDC2
TRIM15
TRIM10
DLGAP4
LOC102724770
DGCR6
SKIV2L
NELFE
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
ITGB2
SLC38A3
GNAT1
NUDCD1
PAOX
ECHS1
CSRNP1
HAAO
CLYBL
GET1
ISG15
HES4
RIN3
ENTPD8
GCHFR
C15orf62
RMDN3
LOC102723996
ICOSLG
ZNF232
USP6
OPA3
FGFR3
CCDC90B
RBIS
NDUFS1
EEF1B2
NOMO2
ERF
PCNX3
MAP3K11
AGMAT
SLC17A5
ATXN7
KNL1
ZNF219
TMEM253
MIA2
PPIL2
PDXDC1
MIA3
CCDC200
KIF21A
TMEM177
CDH2
NID1
AGT
GDI2
PDXP
ALKBH7
PSPN
EPN1
IQANK1
FAM83H
NOMO3
ABCC6
ASS1
TCIRG1
NDUFS8
POLRMT
FGF22
PGK1
GPR171
PDE4DIP
F7
DZIP1
ABAT
GALE
DIDO1
LYPLA2
PAK4
VTA1
NMBR
MRGPRF
ETFA
KDM2A
TREX1
SHISA5
SLC9A3R1
COQ5
RNF10
VIL1
FGF19
F10
NAPRT
MROH6
PLEKHG6
TTYH3
PLXNB2
MEIG1
DCLRE1C
UHRF1BP1L
GOLT1A
RAB1B
CSTF1
AURKA
ATP11A
VANGL1
CERK
IL11RA
GALT
ZFAND2A
UFL1
KAT6A
LINS1
ASB7
C1orf174
RAP1GAP
STAT5B
MYL12B
MYL12A
AMN
MDM2
PAAF1
COA4
TXLNA
TRIP10
GPR108
UBE2V2
STAP2
MPND
TNFAIP8L1
TBX10
NUDT8
SNRPD3
GUCD1
CDIP1
SERPINF1
CCDC93
ZNF285
CAMSAP3
TMEM53
ARMH1
INAVA
ZNF223
TATDN3
NSL1
CREB3L3
GPER1
TTI1
RPRD1B
CABLES1
ZNF408
ARHGAP1
MAD2L2
FBXO6
RABGGTB
CSNK1A1
CDKN2AIP
PPFIBP2
BIRC2
LURAP1L
OSBP
TMCO1
PRR13
PROZ
CRY2
PRKCSH
CCDC151
SLC22A7
CD2BP2
PTPA
CRAT
RAB17
ASGR2
BCL2A1
ZNF367
TMEM150B
KMT5C
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NRL
DCAF11
LRRC2
BRMS1
B4GAT1
TSPO2
UNC5CL
BAHD1
CARHSP1
TPRG1L
NEU4
MFSD3
GPT
VPS54
HELZ
VHLL
TMEM79
SMG5
GLMP
TRIL
FIS1
CLDN15
PRR3
GNL1
FTCD-AS1
FTCD
TMEM169
PECR
RAB43
ZFAND2B
TANK
NOMO1
RAB32
CPPED1
ALDH2
CERS2
ANXA9
DYRK1B
MLXIPL
DONSON
TNFRSF1A
PTBP1
SREBF1
POR
TRAF4
OGFR
MRGBP
SLC30A1
C9orf64
ABLIM1
NME4
DECR2
FGD4
SEC24C
FGF3
JOSD2
ASPDH
PTGDR2
NT5C3A
CTDSP1
DENND2B
ISOC1
TRAPPC10
NSUN5
DCUN1D4
VAMP8
VAMP5
GAPDH
CLASRP
NDUFA6
IRF2BP2
SUN2
PPIAL4F
PPIAL4E
PPIAL4D
NPTN
PIK3R2
SIRT7
NPB
PCYT2
DNMT3A
PGLYRP2
CLK3
CCL25
EPS8L2
DEAF1
SERPINF2
C3
G6PC
FUOM
TMEM254
PRAP1
UBAP2
DMAP1
SOS1
GGNBP2
MYO19
PDE11A
FTH1
HSPE1-MOB4
HSPE1
HSPD1
PPP4C
PGRMC2
HMGCS1
STAT6
ECE1
TRIP13
BRD9
CDC14B
RNF126
ADAP1
SLC35D1
MEAK7
GSDMD
C1GALT1
AKAP1
ASGR1
UBE2J2
SCNN1D
TNXB
SLC25A13
ATF6B
KATNAL1
IST1
SLC50A1
EFNA1
APOE
C4BPB
AMBP
ACP4
LOC105372440
SECTM1
PRMT1
IRF3
BCL2L12
CHKA
MAF1
CYC1
WDR97
ZNF497
A1BG
FOXQ1
JUNB
KDM6B
PDLIM2
SYBU
MRPL24
TAOK3
SUDS3
PTGR1
BACH1
RNF220
SEMA4B
TSPYL4
DSE
TNS3
USP42
GAB2
ZIC4
PPP1R27
MCRIP1
SH3BP5L
RCAN1
TBCCD1
DNAJB11
SLC22A18
CERS4
LRIG2
COQ2
EDEM1
RBKS
BABAM2
ID1
SF3B2
GAL3ST3
STXBP6
TMEM143
SYNGR4
METTL7B
ELAVL3
PRR5
TEAD3
ANKS4B
GNG4
GDF15
SEC16B
ITPKC
COQ8B
ZNF213
TP53I13
ABHD15
URGCP-MRPS24
URGCP
ZNF564
CHD1
TMEM262
PMM1
SYNCRIP
RAB3IL1
EPHX2
TJAP1
ZBED4
FBLN1
GSTT1
FASTKD1
MST1
ITGAE
PKP4
CCDC148
CPT1B
SYCE3
LAX1
UROC1
CHST13
TFR2
WFDC3
DNTTIP1
CCDC42
LGR6
ELK4
RRM2
SLC6A13
UBR4
MAN2C1
PKLR
FDPS
ADGRG7
NIPAL1
CNGA1
AXL
RIPK4
NOS1AP
GOLPH3
NPDC1
ENTPD2
PLIN1
TNIP2
ATP1B1
CDKN1A
AP5Z1
VTN
SEBOX
SARM1
GPRC5C
POLR2H
CLCN2
TEX9
RFX7
HADHB
HADHA
TTC31
CCDC142
PHACTR4
ZSWIM1
SPATA25
NEURL2
CTSA
SRSF11
LRRC40
GLRX
CCND2
EFNA2
SMARCB1
FBXW5
C8G
LCN12
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
C2orf88
LRP1
GRTP1
MLF2
SCGB1A1
TNFRSF14
ZNF764
TMPRSS9
MIIP
COX20
GJA9
COMT
GSTK1
NFE2L2
RIN1
NEK4
ITIH1
TTC38
PKDREJ
SMIM6
ZHX3
TMEM82
SLC25A34
NDUFS7
TULP2
NUCB1
NCR3LG1
TOP1MT
SLC9A3R2
PIH1D1
ALDH16A1
SERINC3
PKIG
YEATS4
MANEA
XYLB
ORM1
ORM2
TEF
TAF11
ANKS1A
PABPN1
MMADHC
APOL6
CAMKK2
HNF1A
ERBB3
HMOX1
KRTAP5-6
ZNF710
ZNF696
NEK7
HIC2
PPIAL4H
ZNF48
PPIAL4G
LIN54
CAPN10
MYLPF
TBC1D10B
RTN4RL2
CBX4
SKIL
SLC25A42
ZNF516
ZNF789
ATP5MF-PTCD1
ATP5MF
CCL16
C1orf210
PHETA1
CCL14
GALK1
SLC25A4
PVRIG
GJB1
HOXA4
HOXA3
IL17RC
MYRF
DENND5B
STARD7
SBNO2
AGTRAP
ZFR
CD320
RAB37
HEXB
SP1
PRM3
C19orf12
PRM1
PDGFB
TECPR1
SOX13
PDZK1IP1
C11orf95
IDNK
PUS10
PEX13
CCDC68
SPOCK2
NIPSNAP2
CDC20
AQP11
RARA
TMEM140
OR10J1
SLC25A16
SLX1B
SLX1A
BOLA2B
BOLA2
XPC
LSM3
SULT1A4
SULT1A3
GOLGA8B
GABPA
ATP5PF
SCAF11
GAMT
DAZAP1
ZBTB48
NUP210
CMC1
PRUNE1
MINDY1
IL32
CYB5R3
ATP5MGL
ZNF687
PPP1R9B
CPT2
PFDN2
NIT1
ZNF512B
ZNF768
ZNF747
DOCK9
SMIM14
B2M
GTF2IRD2
GTF2IRD2B
RNASEH2A
PRDX2
SSH3
SLC12A7
HDGF
LMNA
THUMPD3
MEX3A
MARK2
PGGHG
ZNF682
TCP1
MRPL18
IFITM5
PHLDB3
ACTR6
TRMT2A
RANBP1
TGFBR3L
SNAPC2
CTXN1
BCKDK
ADPRHL1
HRK
LOC102724265
PAH
ASCL1
RNF103-CHMP3
RMND5A
VARS2
GTF2H4
CBWD5
SLC35A3
CBWD3
PINK1
UBA6
GSDME
IHH
GATD1
GPX4
POLD4
SLC20A1
CTSO
SLC27A3
GCA
IFIH1
CYP2J2
CYP11A1
DNAJC22
GATA4
TK1
AFMID
AIFM2
RPS5
ZNF468
LMNB1
SLCO2B1
SCARB1
GNPAT
C1orf131
COBL
SH3BP2
ZSWIM3
ACOT8
GLIPR1L1
CAPS2
USP36
EPS8
PPP5D1
CALM3
TESK2
MMACHC
NRBF2
ART1
DCAF8
ART5
GDF7
PLA2G4C
PHRF1
GPR137
CDK5RAP2
RASSF7
LMNTD2
PSMD1
LOC390877
GTF2F1
ADD3
PLIN4
AHSG
GPD1
COX14
KLF7
TMEM106B
PCBD2
SCAMP5
MOGAT3
NIPSNAP1
EPS15
SPAAR
HRCT1
UMPS
TP53I3
SF3B6
FAM228B
MCM7
AP4M1
MMP20
SMIM11B
SMIM11A
CRPPA
PIGC
C1orf105
KLHL5
IFNGR1
B4GALT4
NAT8
NGEF
CAMK2N1
CMTM8
STX18
ZFP36
PAF1
MED29
MRPS24
LHPP
ACO1
SLC11A2
SLC25A10
CYB561
MRPL12
PRKAG2
TKFC
DDB1
C2orf42
TNFSF13
NUAK1
MAPK6
SENP3
ZNF567
ATXN7L1
FHIT
TRIM27
MESP2
IRF2
KMT5A
HSD17B11
ESRRA
CATSPERZ
HAMP
CORO2A
MPP1
PLEKHA7
PALB2
DCTN5
C1QTNF8
CRYBG2
IL7
LY6E
HEATR5A
CLMN
MRPL20
CCNL2
ITPKA
CRYBA2
SEL1L3
COPB2
GAL3ST2
ANK2
CYCS
ARHGEF11
IL17RB
CHDH
PARP4
AGXT
RUSC2
H3-3B
HDHD5
PPP4R3A
CNNM3
ZMIZ1
PCGF1
PHF12
LBX2
SELENOP
RHOC
APOB
UQCRHL
MVP
PTP4A1
CCN2
ORC2
GCLC
CXCL17
AHCY
ABCD3
ARHGEF39
PGAP3
ERBB2
SIT1
CCDC107
SRCIN1
RAPGEF1
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
RHEX
NCS1
SPTBN4
ACY3
MGST2
SPON1
CCDC71
NEK2
DOK4
ALOX12B
NUMB
SMPDL3A
ACOX2
SLC7A7
SLC35D2
SOWAHA
CNDP1
FYB2
SUCLA2
SEC13
MIDEAS
PLEKHG2
KIF1C
INCA1
LARP1
BPHL
AKR1A1
NUDC
NR0B2
GPR142
AP1M1
SLCO4A1
RAPGEF4
ZNF214
NLRP14
CBSL
CBS
KANK1
TMEM125
FOXA3
PKDCC
NR1I3
F11R
SH3GL1
NSMCE1
RXRA
APOC3
LRRC1
MMP15
TRAF7
RAB26
CFB
IGSF23
CDK3
AGPAT2
PANK1
BCAR1
WEE1
SLC45A4
DOCK6
SULT2B1
COLCA2
MSH5
DDAH2
CLIC1
RGS3
SLC19A3
CSNK1D
TCP10L
UGDH
SLC2A14
GUCA1B
EPS8L3
FUT5
COL21A1
FCHO2
ATP7B
ALG11
TSC22D1
LGALS4
POLR2C
TRIM14
CCL20
AJUBA
CLIP2
PTK2B
LRRC3
APOA1
DHRS3
LIPE
FN3K
OCIAD2
LSM1
IQGAP2
GIMAP5
PABPC4
MGAT1
PIF1
BAG4
LRRC74A
SDR9C7
GATA3
CARM1
CPLX2
USP2
TBC1D22A
HDHD3
SDC1
IVD
LASP1
APOA4
LIME1
KYAT1
ATE1
COPS4
POLR2E
PPP2CB
GSE1
TRIB3
MARVELD1
CPNE7
NCOA4
TST
MPST
ZNF184
PDF
CDH17
NFATC3
GIPC2
MRPL2
KLC4
CUL7
PSMA5
MYO18A
SDCBP2
PER2
LRRC8A
PLOD1
PIK3R3
KLHDC2
TSPAN1
P3R3URF-PIK3R3
P3R3URF
PERP
MAN1A1
PRR15L
GLYCTK
PPIP5K2
HJV
SEPTIN9
SCLY
TPT1
SIGMAR1
NR1D1
MTRNR2L1
INF2
PALM3
TMBIM1
TRPM1
DNAJC25-GNG10
DNAJC25
DNAAF2
TM4SF5
CAPN2
DOCK5
FAM168B
STK24
CORO1C
ASL
GAB1
FNIP1
SMAD3
SARDH
PEPD
LPP
RBMS1
HNMT
VEGFA
MRPL33
MYD88
ACAA1
WAS
DAND5
SLURP2
TACR2
RBP5
CLSTN3