ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

KDM6B
MAMDC2
SCRT2
KNL1
ISG15
HES4
SKIV2L
NELFE
MTRNR2L8
NDUFS1
EEF1B2
KIF5C
MTRNR2L2
MSH3
DHFR
CCDC71
MIA2
PADI3
PHF12
NEK2
NSMCE1
CRYBG2
RGPD1
RGPD2
DNAJC25-GNG10
DNAJC25
DUX4
ACSL5
UQCRHL
WDR36
PLOD1
KIAA2013
ZFP36
PLEKHG2
ERICH3
SPTBN4
MTRNR2L1
ZSWIM3
ACOT8
SPON1
WDR74
STX5
MORC1
B3GLCT
SEPTIN4
CSTF1
AURKA
SNRPA
C19orf54
IGFBP4
SLC3A2
EXOC1
SPHK2
DBP
SFRP5
GPX4
POLR2E
ART1
LMTK3
CCDC200
LASP1
SH3D21
PPIP5K2
CCL20
SFTPC
SLC41A2
NR1I3
SIAH2
LSM1
BAG4
RPS3A
LOC100509620
FAM169A
MPI
RHOC
PRKCSH
CCDC151
POLDIP3
MIDEAS
LOC390877
GTF2F1
CHST11
MYC
CXCL17
TRIM48
INAVA
CPLX2
PTPRF
PCGF1
LBX2
PRKAG2
PRR3
GNL1
RPL34
OCIAD2
MRPL24
HDGF
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
ERBB3
SOWAHA
NDRG1
FUT5
MTMR11
PPEF2
SMG8
NCS1
ATP5MC3
SH3D19
RAB5C
ADAM22
SASH1
DPAGT1
C2CD2L
ZBED9
URGCP-MRPS24
URGCP
CAMK2N1
ARNT
CCNI
KDM3A
ABLIM1
MTFMT
PAX2
GNB1
TRIM2
RAPGEF1
CAB39
TTC31
CCDC142
TAOK3
SUDS3
YARS1
S100PBP
C11orf49
B3GNT3
HMOX1
YPEL1
PLAUR
GSTA3
BRD4
PTK7
NLRX1
PHC2
FAM110B
TPD52
ZC3H10
RPL41
PCBP1
SLC7A5
UBE2R2
CDH17
MRPS10
RBBP5
BCL9L
SEC24D
PJA2
SCARB1
S100A16
S100A14
SLC27A5
RABGGTB
STAT6
LENG8
ZNF696
TESK2
MMACHC
MUC3A
NKPD1
LOC102724770
DGCR6
LIPK
CARM1
PHACTR4
CERS4
MVP
BORCS7
VAC14
WSB2
RTBDN
MAST1
PPP5D1
CALM3
CSF1R
UROS
BCCIP
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
PSMA5
IRF2BP2
IFI35
NR2F2
TINAGL1
RPL27
PRDM10
PRKCI
PPP2CB
CD2BP2
CD86
ADGRF3
SELENOI
CUX1
PYCARD
RIPK4
CSNK1A1
CAMK2G
CRYGS
MTRNR2L9
IGF2BP3
ATXN7L1
SFXN3
PDZD7
SGIP1
PAF1
MED29
C19orf33
COX16
RAB17
MYRF
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
CCDC90B
FHL2
PTP4A1
TSC22D1
NMD3
TJP3
CCND2
OXCT2
NUPR2
CHCHD2
RNF121
LOC100133315
SLCO4A1
SERINC2
ARHGEF39
SIT1
CCDC107
ADAMTS14
IL6ST
MLF2
TMEM71
PHF20L1
KCNMB4
PRR15L
GNAZ
SLC25A5
POLR1E
NRCAM
PARP14
TNS3
FBXO46
U2SURP
MLEC
ZNF564
IL20RB
PHF14
ABHD2
TMEM169
PECR
SMAD3
NIBAN2
ZC3H12D
RAD51AP1
C12orf4
EIF4A2
GALE
TNFRSF1A
USP37
CNOT9
TMED4
DDX56
ZFP36L1
JUND
IQCN
HOXA4
HOXA3
GPA33
RAD50
HOXA5
C1QTNF1
NCAPD3
VPS26B
CREB3L3
IGSF23
KRTAP5-7
TNFAIP8L2-SCNM1
TNFAIP8L2
NCKAP5
SCNM1
LYSMD1
PLA2G7
ANKRD66
SAXO2
EFL1
PRKCD
EHD1
BCAR3
KPNA7
TRIP12
FBXO36
MAP4K5
ATL1
IDH1
SCP2
PWP1
SAMD1
C19orf67
FBXW5
C8G
LCN12
ZFYVE28
VPS54
ROCK2
LIM2
C19orf84
TREX1
SHISA5
ALDH3A2
ATP13A3
ATRN
ANK2
TM4SF1
METTL24
LUC7L2
FMC1-LUC7L2
FMC1
PIH1D1
ALDH16A1
GIMAP5
COMTD1
TEX45
PEX11G
CTSO
BLVRB
ARID1A
PRAG1
FIBCD1
GRAMD2B
GPANK1
CSNK2B
C6orf47
APOM
LY6G5B
ARPIN-AP3S2
ARPIN
IRAG1
ITGA7
RDH5
CD63
BLOC1S1
USP2
EAPP
CITED2
OSBPL3
BORCS6
NEK6
CHMP4B
DIDO1
PAQR4
KREMEN2
RBFOX2
TKFC
DDB1
CYP2C18
ARL14
HGS
ARL16
MSL1
MGST2
FCHO2
CPHXL
ALG14
RCAN1
EPOP
CSDC2
SLC27A4
RSPH10B2
RSPH10B
ITPK1
ACAA2
MBD3
SERINC5
METTL7B
ZFAND3
CTSE
RFX2
PLA2G4C
CEP250
DKK1
SCAF11
TMCO1
LGALS4
CORO1C
MYO1E
KATNB1
RPS26
SLC20A1
NPTN
PFKP
RNGTT
ADGRB1
SLC9A3R1
RGS3
FAM107B
TRIP10
GPR108
KMT5A
KIZ
SNTB2
SP1
PPP1R9B
ZNF592
ACTG1
ROMO1
ZMYND8
SPAAR
HRCT1
RPL18
RNF114
CERS2
NOS1AP
EIF1AD
CST6
BANF1
RARA
WDR1
PARP16
GBA
MDM4
ITGA3
ADPRHL1
LIMK2
PDPK1
CEMP1
ZBTB8OS
RBBP4
GALK2
PISD
COPS2
TDP2
ACOT13
RNF43
TTI2
SPAG8
HINT2
VWCE
CLASP1
LAMP3
CASTOR1
SWSAP1
EPOR
PAK4
RPS6KA1
ZNF827
GNAL
CHMP1B
RAB11A
SMARCD2
SH2D5
PGAP3
ERBB2
POLD4
PPP1R37
ZNF165
OR1F12
BBC3
AHSP
EPS8L2
DEAF1
NR1D1
PLXDC1
GAB1
TOB2
RNF5
AGPAT1
ACHE
UFSP1
SEPSECS
PLAAT3
ZG16B
SERTAD1
PRX
PYGL
PLK2
ACADM
GPR137
PITX3
GBF1
GRID1
TAF12
ADI1
GTF3A
NRP1
SLC38A3
GNAT1
TRUB2
COQ4
GLRX2
CDC73
KLK6
SPINT2
PPP1R14A
WNT7B
PDXP
HAAO
PAOX
ECHS1
PKP4
CCDC148
GET1
PSMD1
HNF1A
ZNF232
USP6
AGMAT
VIL1
CNNM3
ZSWIM1
SPATA25
NEURL2
CTSA
IQANK1
FAM83H
ZMIZ1
CARHSP1
ZNF567
SELENOP
TATDN3
NSL1
APOB
PCNX3
MAP3K11
VHLL
TMEM79
SMG5
GLMP
NOMO3
ABCC6
SIRT7
KIF21A
TP53I13
ABHD15
NPB
VTN
SEBOX
SARM1
PCYT2
AQP11
FGFR3
PINK1
PHLDB3
SLCO2B1
DENND2B
KRTAP5-6
CCN2
ORC2
EDEM1
GSDMD
SERPINF2
GCLC
F10
CDKN2AIP
PABPN1
RAB37
PLXNB2
VAMP8
VAMP5
AHCY
ABCD3
HADHB
HADHA
MAD2L2
FBXO6
NRL
DCAF11
CCL16
SRSF11
LRRC40
SRCIN1
RHEX
ENTPD8
RBKS
GAMT
DAZAP1
BABAM2
ACY3
ASS1
SECTM1
UBR4
GPRC5C
DOK4
ALOX12B
F7
NUMB
LHPP
SMPDL3A
C1orf210
ACOX2
SLC7A7
CTDSP1
PLEKHG6
ZBTB48
ZNF219
TMEM253
SLC35D2
PDLIM2
C9orf64
AHSG
XYLB
CNDP1
CMC1
FYB2
SUCLA2
RAP1GAP
C1GALT1
IL11RA
GALT
SEC13
NID1
DNAJC22
DENND5B
ATXN7
KIF1C
INCA1
ITGB2
LARP1
BPHL
CDC14B
AKR1A1
NUDC
NR0B2
GPR142
AP1M1
PDE11A
NDUFA6
GPR171
RAPGEF4
IDNK
ZNF214
NLRP14
CBSL
CBS
HEXB
PHETA1
MRPL20
CCNL2
KANK1
TMEM125
EPHX2
GDI2
FOXA3
PKDCC
TTYH3
SREBF1
GLRX
F11R
SH3GL1
PDGFB
ISOC1
RXRA
AGXT
APOC3
LRRC1
MMP15
TRAF7
RAB26
CFB
PRUNE1
MINDY1
MLXIPL
NOMO1
ID1
RAB32
LOC102724265
CDK3
AGPAT2
NEK4
ITIH1
MMADHC
PRMT1
IRF3
BCL2L12
ANKS4B
UROC1
CHST13
PANK1
BCAR1
ASGR2
SNRPD3
GUCD1
WEE1
AKAP1
SLC45A4
DOCK6
PPIL2
FTH1
SULT2B1
COLCA2
PUS10
PEX13
MSH5
DDAH2
CLIC1
ANXA9
SLC19A3
CSNK1D
TCP10L
UGDH
RIN3
SLC2A14
CDIP1
GUCA1B
TMEM177
EPS8L3
COL21A1
TCIRG1
NDUFS8
ATP7B
ALG11
COMT
CERK
POLR2C
MMP24OS
MMP24-AS1-EDEM2
TRIM14
C3
IFNGR1
AJUBA
CLIP2
PTK2B
LRRC3
APOA1
ALKBH7
PSPN
NEU4
DHRS3
FASTKD1
ZFAND2A
HSPE1-MOB4
HSPE1
HSPD1
LURAP1L
IL32
LIPE
FN3K
IQGAP2
PABPC4
MGAT1
ABAT
PIF1
G6PC
STARD7
TULP2
NUCB1
LRRC74A
AGT
SDR9C7
GATA3
TBC1D22A
HDHD3
IST1
PPP1R27
MCRIP1
SDC1
HMGCS1
IVD
CHKA
GNG4
APOA4
GDF7
LIME1
KYAT1
ATE1
COPS4
GSE1
TRIB3
SYBU
MARVELD1
CPNE7
NCOA4
TST
MPST
ZNF184
PDF
OSBP
NFATC3
GIPC2
LOC102723996
ICOSLG
MRPL2
KLC4
CUL7
MYO18A
SDCBP2
PER2
LRRC8A
KLHDC2
PERP
CPPED1
RAB43
GAL3ST2
MAN1A1
SLC35D1
CYB5R3
ATP5MGL
GLYCTK
FUOM
HJV
SEPTIN9
PAAF1
COA4
SCLY
TPT1
SIGMAR1
DMAP1
INF2
PALM3
TMBIM1
POR
TRPM1
ETFA
STAT5B
DNAAF2
TRIM15
TRIM10
TM4SF5
ZNF710
CAPN2
DOCK5
GAPDH
FAM168B
STK24
ASL
APOL6
IL7
FNIP1
SARDH
PEPD
LPP
RBMS1
HNMT
VEGFA
MRPL33
MYD88
ACAA1
WAS
DAND5
SLURP2
TACR2
CSRNP1
RBP5
CLSTN3
FRG2C
NQO2
MOV10L1
PTK6
CBY3
FAM83C
EIF6
RNF126
PALM2AKAP2
APOC2
ZSCAN2
C12orf43
ETFB
C2orf88
IL4R
SMLR1
APOC4
DLGAP4
TPCN2
MFSD3
GPT
MACC1
KHNYN
CBLN3
PON2
GATA4
LRP1
ARHGEF16
PIEZO1
ZNF764
DPP6
PXYLP1
MCF2L
STAP2
MPND
CA9
AFF1
POLR3H
TRIM47
GLI1
INHBE
EFNA2
IRF2BPL
DZIP1
GJB1
MOGAT3
CDR2
TNRC18
LOC100129484
ADRB3
MBL2
ZNRF1
KIAA1522
DNMT3A
UHRF1BP1L
WDR59
TMEM270
SMIM19
SLC20A2
LZTS3
DONSON
GTF2I
SLC6A12
TADA1
SLC28A1
TRAF4
PTPA
CRAT
SLC12A7
CST3
HSD17B11
PLEC
NPDC1
ENTPD2
MAF
AGPAT3
UBA6
SLC2A4RG
USP18
NGEF
COL5A3
PLEKHB2
TFR2
GNA11
AKT2
FGFR4
AK4
USH1C
OTOG
C11orf24
NOMO2
PROZ
CLDN14
BRMS1
MAN2C1
B4GAT1
MIDN
TNXB
KDELR2
HGD
GGT1
GPER1
SEC23A
MYL12B
LAG3
CLDN1
SCN9A
MMP20
PSMB10
LCAT
EDN2
RASSF5
SNTG1
ZFAND2B
RBIS
H4C3
H1-6
MESP2
AFP
TRAF3IP2
SLC36A1
KRT8
ERF
PAH
ASCL1
RBSN
CCL14
RUVBL1
SPATA2
POLR2H
CLCN2
CRK
CYP1A1
BRCA1
HIC2
APEH
ETNK2
LY6E
MFN2
UCKL1