ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX15717764: EndoC-BH1

◢ SRX15717768: EndoC-BH1

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX15717766: Hep G2

◢ SRX15717767: Hep G2

◢ SRX15717769: Hep G2

◢ SRX15717777: hESC derived endocrine progenitor cells

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX15717776: hESC derived hepatoblasts

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX15717770: hESC derived pancreatic cells

◢ SRX15717775: hESC derived pancreatic cells

◢ SRX15717778: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ SRX15717771: Pancreatic islets

◢ HNF4A: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
KDM6B
ISG15
HES4
KIF5C
ACSL5
NDUFS1
EEF1B2
MTRNR2L1
RGPD1
RGPD2
MAMDC2
SCRT2
CRYBG2
PHF12
NSMCE1
MTRNR2L9
NEK2
PRR3
GNL1
MIA2
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
SKIV2L
NELFE
CCL20
SLC9A3R1
CCDC90B
UQCRHL
GNAZ
ATXN7L1
SH3D21
TRIB3
LOC100509620
MYC
PIH1D1
ALDH16A1
WDR74
STX5
CCDC71
SEPTIN4
SFRP5
INAVA
ART1
URGCP-MRPS24
URGCP
ARHGEF39
SIT1
CCDC107
MIDEAS
RPS3A
GPX4
POLR2E
DUX4
CDC14B
ARL14
CXCL17
SCARB1
RHOC
WDR36
LOC102724770
DGCR6
CSTF1
AURKA
KNL1
LOC390877
GTF2F1
POLR1E
KIZ
CENPVL2
CENPVL1
PCGF1
LBX2
CPLX2
LMTK3
HMOX1
FAM169A
SGIP1
ABLIM1
DNAJC25-GNG10
DNAJC25
DKK4
SEC24D
SLC3A2
CCDC200
C19orf12
SF3A3
ERBB3
RAPGEF1
SPON1
PADI3
SELENOP
PTP4A1
SMARCD2
TRIM48
NCOA4
MORC1
NEK6
PHC2
MRPS10
KRT31
TNFRSF10B
LASP1
YARS1
S100PBP
IRF2BP2
PPP2CB
PPIP5K2
NQO2
RPP25L
NFE2L3
BCL9L
B3GLCT
PLAUR
EAPP
MRPS28
CERS2
USP2
LENG8
ZBED9
SPTBN4
C11orf24
TMEM169
PECR
RPL34
FAM3C
BPHL
GAB1
EXOC1
SP2
HRH2
IST1
B3GNT3
ZSWIM3
ACOT8
AGPAT2
RBBP5
NR1I3
MTRNR2L10
TESK2
MMACHC
ROCK2
ATRN
MVP
SEC13
COPS4
CEP128
PRKCD
ARPIN-AP3S2
ARPIN
UBE2R2
SGCB
TPT1
SPHK2
DBP
CD2BP2
MEAK7
IRAG1
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
MMP20
KRTAP5-7
CFLAR
RFX2
RARA
SAXO1
RRAGA
MUC3A
MRPL24
HDGF
RBKS
BABAM2
TTC31
CCDC142
TP53I3
SF3B6
FAM228B
RAB17
NCS1
TJP3
PRDM10
CDHR2
RNF44
C1QTNF1
ADI1
NFIL3
CLASP1
PTPRF
KDM3A
PRAG1
TIGD3
PLOD1
KIAA2013
CHST11
MAN2C1
NUP107
GUCA1B
TNFRSF1A
GOLGA4
ERICH3
SERINC5
CLCF1
LOC102723996
ICOSLG
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
TRIM2
GJB1
ARNT
INTS4
SEC23A
SIAH2
CSNK1A1
SIRT7
SH3D19
SLC20A1
MAFG
CDK5RAP1
AFF1
GNB1
GUCA2A
YJU2
FUT5
ETS2
ZC3H12D
RBP2
METTL7B
SPTBN1
MAP1LC3C
SNRPD3
GUCD1
PDXP
MMADHC
RFFL
ABCA10
TMEM183A
MGAT1
S100A16
S100A14
MICAL2
SNN
AMN1
FZR1
DOHH
RIPK4
OCIAD2
ABR
PRKCI
ATF4
TM4SF1
CA7
CD86
CAMK2G
ALG10B
VPS54
JUND
IQCN
BCAM
SLC27A5
TEX45
PEX11G
TDP2
ACOT13
ABCC3
PGLYRP2
TMEM120A
CCNI
EIF1AD
CST6
BANF1
PAX2
TINAGL1
DUSP1
PRKCSH
CCDC151
HMGN4
TNPO3
MYRF
ALDH3A2
SLC25A17
ABTB2
MBD3
RNF43
PSMA5
DNAJC22
ACAA2
DSG2
EIF4A2
LSG1
C16orf74
GDF15
BAAT
IGFBP4
PPP1R12B
UBE2T
CIBAR2
RUNDC3A
IPO4
TM9SF1
ZNF827
PPP1R35
U2SURP
YAP1
SOWAHA
RABGGTB
LSM5
AVL9
LDAH
SYT12
BORCS7
AKR1A1
PEMT
RPS7
PRKAG2
POLDIP3
APBA2
TIMM9
KIAA0586
SLC7A5
GDPD1
MRPL2
KLC4
CUL7
CCND2
EPS8
RPL7
RDH10
ZFP36L2
SPDYE14
SPDYE10P
PPP1R11
POLR1H
CELA2A
EDN2
HOXA4
HOXA3
HOXA5
CA13
CYP17A1
PTS
ZNF408
ARHGAP1
RNF121
LOC100133315
ZNF653
B4GALT4
DPAGT1
C2CD2L
TNFAIP8L2-SCNM1
TNFAIP8L2
LAPTM4A
SCNM1
LYSMD1
SLC1A3
STAT6
NUDCD1
NPTXR
VGLL4
P3H4
FKBP10
GLRX2
CDC73
MRPL11
C1orf174
SHTN1
TKFC
DDB1
KHK
RCOR1
RAB30
USP16
RWDD2B
LY75-CD302
LY75
SKIDA1
MLLT10
PTPRH
HAAO
PAOX
ECHS1
PKP4
CCDC148
EPS8L2
DEAF1
GET1
PSMD1
HNF1A
ZNF232
USP6
AGMAT
VIL1
CNNM3
ZSWIM1
SPATA25
NEURL2
CTSA
IQANK1
FAM83H
ZMIZ1
SCAF11
CARHSP1
ZNF567
TATDN3
NSL1
APOB
PCNX3
MAP3K11
VHLL
TMEM79
SMG5
GLMP
NOMO3
ABCC6
KIF21A
TP53I13
ABHD15
NPB
VTN
SEBOX
SARM1
PCYT2
AQP11
FGFR3
PINK1
PHLDB3
SLCO2B1
DENND2B
KRTAP5-6
CCN2
TREX1
SHISA5
ORC2
EDEM1
GSDMD
SERPINF2
GCLC
F10
CDKN2AIP
PABPN1
RAB37
PLXNB2
VAMP8
VAMP5
AHCY
ABCD3
HADHB
HADHA
MAD2L2
FBXO6
ZFP36
NRL
DCAF11
PGAP3
ERBB2
CCL16
SRSF11
LRRC40
SRCIN1
RHEX
ENTPD8
GAMT
DAZAP1
ACY3
MGST2
ASS1
SECTM1
UBR4
GPRC5C
PPP5D1
CALM3
DOK4
ALOX12B
F7
NUMB
LHPP
SMPDL3A
C1orf210
ACOX2
SLC7A7
CTDSP1
PLEKHG6
ZBTB48
ZNF219
TMEM253
SLC35D2
PDLIM2
C9orf64
AHSG
XYLB
CNDP1
CMC1
FYB2
SUCLA2
RAP1GAP
C1GALT1
CREB3L3
IL11RA
GALT
NID1
PAF1
MED29
DENND5B
PLEKHG2
ATXN7
KIF1C
INCA1
ITGB2
LARP1
NUDC
NR0B2
GPR142
AP1M1
PDE11A
NDUFA6
GPR171
SLCO4A1
RAPGEF4
IDNK
ZNF214
NLRP14
CBSL
CBS
HEXB
PHETA1
MRPL20
CCNL2
KANK1
TMEM125
EPHX2
GDI2
FOXA3
PKDCC
TTYH3
SREBF1
GLRX
F11R
SH3GL1
PDGFB
ISOC1
RXRA
AGXT
APOC3
LRRC1
MMP15
TRAF7
RAB26
CFB
IGSF23
PRUNE1
MINDY1
MLXIPL
NOMO1
ID1
RAB32
LOC102724265
CDK3
NEK4
ITIH1
PRMT1
IRF3
BCL2L12
ANKS4B
UROC1
CHST13
PANK1
BCAR1
ASGR2
GALE
WEE1
AKAP1
SLC45A4
DOCK6
PPIL2
FTH1
SULT2B1
COLCA2
PUS10
PEX13
MSH5
DDAH2
CLIC1
RGS3
ANXA9
SLC19A3
CSNK1D
TCP10L
UGDH
RIN3
SLC2A14
CDIP1
TMEM177
EPS8L3
COL21A1
TCIRG1
NDUFS8
FCHO2
ATP7B
ALG11
COMT
TSC22D1
CERK
LGALS4
POLR2C
MMP24OS
MMP24-AS1-EDEM2
TRIM14
C3
IFNGR1
AJUBA
CLIP2
PTK2B
LRRC3
APOA1
ALKBH7
PSPN
NEU4
DHRS3
FASTKD1
ZFAND2A
HSPE1-MOB4
HSPE1
HSPD1
LURAP1L
IL32
LIPE
FN3K
LSM1
IQGAP2
GIMAP5
PABPC4
ABAT
PIF1
G6PC
BAG4
STARD7
TULP2
NUCB1
LRRC74A
AGT
SDR9C7
GATA3
CARM1
SLC38A3
TBC1D22A
HDHD3
PPP1R27
MCRIP1
SDC1
HMGCS1
IVD
CHKA
GNG4
APOA4
GDF7
LIME1
KYAT1
ATE1
GSE1
SYBU
MARVELD1
CPNE7
TST
MPST
ZNF184
PDF
OSBP
CDH17
NFATC3
GIPC2
MYO18A
SDCBP2
DIDO1
PER2
LRRC8A
KLHDC2
PERP
CPPED1
RAB43
GAL3ST2
MAN1A1
PRR15L
SLC35D1
CYB5R3
ATP5MGL
GLYCTK
FUOM
HJV
SEPTIN9
GNAT1
PAAF1
COA4
SCLY
SIGMAR1
NR1D1
DMAP1
INF2
PALM3
TMBIM1
POR
TRPM1
ETFA
STAT5B
DNAAF2
TRIM15
TRIM10
TM4SF5
ZNF710
CAPN2
DOCK5
GAPDH
FAM168B
STK24
CORO1C
ASL
APOL6
IL7
FNIP1
SMAD3
SARDH
PEPD
LPP
RBMS1
HNMT
VEGFA
MRPL33
MYD88
ACAA1
WAS
DAND5
SLURP2
TACR2
CSRNP1
RBP5
CLSTN3
FRG2C
MOV10L1
PTK6
CBY3
FAM83C
EIF6
RNF126
PALM2AKAP2
APOC2
ZSCAN2
VWCE
ITPK1
C12orf43
ETFB
C2orf88
IL4R
SMLR1
APOC4
TNS3
DLGAP4
TPCN2
MFSD3
GPT
MACC1
KHNYN
CBLN3
PON2
GATA4
LRP1
ARHGEF16
PIEZO1
ZNF764
DPP6
PXYLP1
MCF2L
STAP2
MPND
CA9
WSB2
RBFOX2
POLR3H
TRIM47
GLI1
INHBE
EFNA2
IRF2BPL
DZIP1
MOGAT3
CDR2
TNRC18
LOC100129484
ADRB3
MBL2
ZNRF1
KIAA1522
DNMT3A
UHRF1BP1L
IL6ST
WDR59
TMEM270
SMIM19
SLC20A2
LZTS3
DONSON
GTF2I
SLC6A12
TADA1
SLC28A1
TRAF4
PTPA
CRAT
SLC12A7
CST3
HSD17B11
PLEC
IGF2BP3
NPDC1
ENTPD2
MAF
AGPAT3
UBA6
SLC2A4RG
USP18
NGEF
COL5A3
PLEKHB2
ANK2
TFR2
GNA11
AKT2
FGFR4
AK4
USH1C
OTOG
NOMO2
PROZ
CLDN14
BRMS1
B4GAT1
MIDN
TNXB
PLA2G4C
KDELR2
HGD
GGT1
GPER1
MYL12B
LAG3
CLDN1
SCN9A
POLD4
PSMB10
LCAT
RASSF5
SNTG1
ZFAND2B
RBIS
H4C3
H1-6
MESP2
ZFP36L1
AFP
TRAF3IP2
SLC36A1
KRT8
ERF
PAH
ASCL1
RBSN
CCL14
RUVBL1
SPATA2
POLR2H
CLCN2
CRK
CYP1A1
RCAN1
BRCA1
HIC2
APEH
ETNK2
LY6E
MFN2
UCKL1
CDX2
TMEM254
TK1
AFMID
CPNE6
SAR1B
RTN4RL2
SERINC2
DPYSL4
FKBP7
PKLR
FDPS
NMD3
ELF5
TPRN
TMEM203
NDOR1
JOSD2
PRAP1
MAGI2
SLC12A9
NOL4L
SEC24A
IYD
ZDHHC19
SLC51A
NIPSNAP1
ASPDH
ATP11A
ATP8B1
SPPL2A
MST1
CBX4
SLC50A1
EFNA1
LINS1
ASB7
PLG
GPC3
CLDN19
TRIM26
PPP4R3A
AMACR
PHACTR4
SPAAR
HRCT1
BCL2A1
ECE1
TMPRSS2
BAIAP2L2
GCAT
TJAP1
CXADR
ZBTB4
POLR2A
MUC20
CAMSAP3
PTGDR2
AHDC1
SEC16B
SH3BGRL2
LRP5L
RSPH10B2
RSPH10B
CNNM2
NRXN2
VANGL1
SEMA4C
AP1B1
APOE
LYRM7
HINT1
EPN1
SPPL2B
LSM7
TMEM37
H6PD
INTS9
HMBOX1
TF
GPR35
C11orf86
EEFSEC
INPP1
BLOC1S5
ANK3
DYNC2I1
IL1R1
SMARCB1
SOD2
ARHGAP27
PTMS
QPRT
FAM50B
TLCD4-RWDD3
TLCD4
ABCB4
MYADM
LIMK2
CCDC3
ADGRG1
GALK1
SNRPA
C19orf54
PYGL
CAMK2N1
DGKD
PDPK1
IDH1
RNF217
ZNF512B
ALB