ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748420 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX11453883: GP5d

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◣ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ DRX431474: Hep 3B

◢ SRX10829250: Hep 3B

◢ SRX10829251: Hep 3B

◢ SRX10829252: Hep 3B

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX10475577: Hep G2

◢ SRX10475578: Hep G2

◢ SRX10829253: Hep G2

◢ SRX10829254: Hep G2

◢ SRX10829255: Hep G2

◢ SRX150698: Hep G2

◢ SRX8089917: hESC derived hepatic progenitor

◢ SRX8089918: hESC derived hepatic progenitor

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX11650959: hESC derived pancreatic cells

◢ SRX11650960: hESC derived pancreatic cells

◢ SRX11650961: hESC derived pancreatic cells

◢ SRX11650962: hESC derived pancreatic cells

◢ SRX11650963: hESC derived pancreatic cells

◢ SRX11650964: hESC derived pancreatic cells

◢ SRX11650965: hESC derived pancreatic cells

◢ SRX11650966: hESC derived pancreatic cells

◢ SRX702028: hESC HUES64

◢ DRX431466: JHH-7

◢ SRX2636008: Liver

◢ SRX2636009: Liver

◢ SRX2636083: Liver

◢ SRX2636084: Liver

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L8
KDM6B
ISG15
HES4
KIF5C
ACSL5
NDUFS1
EEF1B2
MTRNR2L1
RGPD1
RGPD2
MAMDC2
SCRT2
CRYBG2
PHF12
NSMCE1
MTRNR2L9
NEK2
PRR3
GNL1
MIA2
NOP9
LTB4R2
LTB4R
DHRS1
CIDEB
SKIV2L
NELFE
CCL20
SLC9A3R1
CCDC90B
UQCRHL
GNAZ
ATXN7L1
SH3D21
TRIB3
LOC100509620
MYC
PIH1D1
ALDH16A1
WDR74
STX5
CCDC71
SEPTIN4
SFRP5
INAVA
ART1
URGCP-MRPS24
URGCP
ARHGEF39
SIT1
CCDC107
MIDEAS
RPS3A
GPX4
POLR2E
DUX4
CDC14B
ARL14
CXCL17
SCARB1
RHOC
WDR36
LOC102724770
DGCR6
CSTF1
AURKA
KNL1
LOC390877
GTF2F1
POLR1E
KIZ
CENPVL2
CENPVL1
PCGF1
LBX2
CPLX2
LMTK3
HMOX1
FAM169A
SGIP1
ABLIM1
DNAJC25-GNG10
DNAJC25
DKK4
SEC24D
SLC3A2
CCDC200
C19orf12
SF3A3
ERBB3
RAPGEF1
SPON1
PADI3
SELENOP
PTP4A1
SMARCD2
TRIM48
NCOA4
MORC1
NEK6
PHC2
MRPS10
KRT31
TNFRSF10B
LASP1
YARS1
S100PBP
PPP2CB
IRF2BP2
PPIP5K2
NQO2
RPP25L
NFE2L3
BCL9L
B3GLCT
PLAUR
EAPP
MRPS28
CERS2
USP2
LENG8
ZBED9
SPTBN4
C11orf24
TMEM169
PECR
RPL34
FAM3C
BPHL
GAB1
EXOC1
SP2
HRH2
IST1
B3GNT3
ZSWIM3
ACOT8
AGPAT2
RBBP5
NR1I3
MTRNR2L10
TESK2
MMACHC
ROCK2
ATRN
MVP
SEC13
COPS4
CEP128
PRKCD
ARPIN-AP3S2
ARPIN
UBE2R2
SGCB
TPT1
SPHK2
DBP
CD2BP2
MEAK7
IRAG1
ABHD14B
ABHD14A-ACY1
ABHD14A
ACY1
MMP20
KRTAP5-7
CFLAR
RFX2
RARA
SAXO1
RRAGA
MUC3A
MRPL24
HDGF
RBKS
BABAM2
TTC31
CCDC142
TP53I3
SF3B6
FAM228B
RAB17
NCS1
TJP3
PRDM10
CDHR2
RNF44
C1QTNF1
ADI1
NFIL3
CLASP1
PTPRF
KDM3A
PRAG1
TIGD3
PLOD1
KIAA2013
CHST11
MAN2C1
NUP107
GUCA1B
TNFRSF1A
GOLGA4
ERICH3
SERINC5
CLCF1
LOC102723996
ICOSLG
PIK3R3
TSPAN1
P3R3URF-PIK3R3
P3R3URF
TRIM2
GJB1
ARNT
INTS4
SEC23A
SIAH2
CSNK1A1
SIRT7
SH3D19
SLC20A1
MAFG
CDK5RAP1
AFF1
GNB1
GUCA2A
YJU2
FUT5
ETS2
ZC3H12D
RBP2
METTL7B
SPTBN1
MAP1LC3C
SNRPD3
GUCD1
PDXP
MMADHC
RFFL
ABCA10
TMEM183A
MGAT1
S100A16
S100A14
MICAL2
SNN
AMN1
FZR1
DOHH
RIPK4
OCIAD2
ABR
PRKCI
ATF4
TM4SF1
CA7
CD86
CAMK2G
ALG10B
VPS54
JUND
IQCN
BCAM
SLC27A5
TEX45
PEX11G
TDP2
ACOT13
ABCC3
PGLYRP2
TMEM120A
CCNI
EIF1AD
CST6
BANF1
PAX2
TINAGL1
DUSP1
PRKCSH
CCDC151
HMGN4
TNPO3
MYRF
ALDH3A2
SLC25A17
ABTB2
MBD3
RNF43
PSMA5
DNAJC22
ACAA2
DSG2
EIF4A2
LSG1
C16orf74
GDF15
BAAT
IGFBP4
PPP1R12B
UBE2T
CIBAR2
RUNDC3A
IPO4
TM9SF1
ZNF827
PPP1R35
U2SURP
YAP1
SOWAHA
RABGGTB
LSM5
AVL9
LDAH
SYT12
BORCS7
AKR1A1
PEMT
RPS7
PRKAG2
POLDIP3
APBA2
TIMM9
KIAA0586
SLC7A5
GDPD1
CCND2
MRPL2
KLC4
CUL7
EPS8
RPL7
RDH10
ZFP36L2
SPDYE14
SPDYE10P
PPP1R11
POLR1H
CELA2A
EDN2
HOXA4
HOXA3
HOXA5
CA13
CYP17A1
PTS
ZNF408
ARHGAP1
RNF121
LOC100133315
ZNF653
B4GALT4
DPAGT1
C2CD2L
TNFAIP8L2-SCNM1
TNFAIP8L2
LAPTM4A
SCNM1
LYSMD1
SLC1A3
STAT6
NUDCD1
NPTXR
VGLL4
P3H4
FKBP10
GLRX2
CDC73
MRPL11
C1orf174
SHTN1
TKFC
DDB1
KHK
RCOR1
RAB30
USP16
RWDD2B
LY75-CD302
LY75
SKIDA1
MLLT10
PTPRH
HAAO
PAOX
ECHS1
PKP4
CCDC148
EPS8L2
DEAF1
HNF1A
PSMD1
VIL1
AGMAT
CNNM3
IQANK1
FAM83H
ZMIZ1
GET1
NOMO3
ABCC6
ZSWIM1
SPATA25
NEURL2
CTSA
ZNF567
CARHSP1
TATDN3
NSL1
ZNF232
USP6
KIF21A
VTN
SEBOX
SARM1
SCAF11
NPB
PCYT2
VHLL
TMEM79
SMG5
GLMP
PCNX3
MAP3K11
FGFR3
TP53I13
ABHD15
PHLDB3
KRTAP5-6
APOB
AQP11
EDEM1
SLCO2B1
PINK1
CCN2
ORC2
TREX1
SHISA5
DENND2B
F10
SERPINF2
RAB37
PLXNB2
GCLC
MAD2L2
FBXO6
PGAP3
ERBB2
GSDMD
SRCIN1
CCL16
PABPN1
ZFP36
NRL
DCAF11
AHCY
MGST2
HADHB
HADHA
SECTM1
SRSF11
LRRC40
F7
CDKN2AIP
ACY3
LHPP
AHSG
SMPDL3A
ACOX2
GPRC5C
RHEX
NUMB
C1orf210
SLC7A7
ASS1
ZBTB48
GAMT
DAZAP1
VAMP8
VAMP5
PPP5D1
CALM3
PLEKHG6
CNDP1
ITGB2
C9orf64
IL11RA
GALT
CBSL
CBS
KIF1C
INCA1
CREB3L3
ENTPD8
ALOX12B
PLEKHG2
AP1M1
DOK4
NID1
RAPGEF4
CTDSP1
PDLIM2
GPR171
FYB2
SLC35D2
SLCO4A1
ZNF219
TMEM253
IDNK
PAF1
MED29
NOMO1
FOXA3
CMC1
SUCLA2
F11R
SH3GL1
UBR4
C1GALT1
GLRX
TMEM125
NUDC
NR0B2
PDGFB
GPR142
LOC102724265
MRPL20
CCNL2
TTYH3
CDK3
PRUNE1
MINDY1
EPHX2
DENND5B
SREBF1
RAP1GAP
ASGR2
TCP10L
KANK1
IGSF23
NEK4
ITIH1
COL21A1
APOC3
HEXB
PHETA1
CFB
PANK1
FTH1
SLC2A14
LARP1
RXRA
SLC45A4
XYLB
GALE
TRAF7
RAB26
PDE11A
ZNF214
NLRP14
MLXIPL
ANKS4B
WEE1
ISOC1
AKAP1
LRRC3
ALKBH7
PSPN
CERK
SLC19A3
RAB32
ATXN7
PUS10
PEX13
RGS3
LRRC1
AJUBA
ZFAND2A
LSM1
FCHO2
TRIM14
PRMT1
IRF3
BCL2L12
FN3K
BCAR1
UROC1
CHST13
DOCK6
NDUFA6
PKDCC
BAG4
MMP15
COMT
SDR9C7
RIN3
C3
PPIL2
LRRC74A
TMEM177
TCIRG1
NDUFS8
TSC22D1
ID1
GDI2
GIMAP5
ABCD3
FASTKD1
IQGAP2
LIPE
DHRS3
ANXA9
G6PC
PTK2B
LGALS4
PPP1R27
MCRIP1
ATE1
APOA1
AGXT
COLCA2
LURAP1L
EPS8L3
IL32
AGT
GDF7
SDC1
IVD
CARM1
MSH5
DDAH2
CLIC1
TULP2
NUCB1
CDIP1
OSBP
SULT2B1
SYBU
SLC38A3
HSPE1-MOB4
HSPE1
HSPD1
HDHD3
NEU4
CSNK1D
IFNGR1
ATP7B
ALG11
MMP24OS
MMP24-AS1-EDEM2
CLIP2
PDF
POLR2C
SDCBP2
HJV
PIF1
DIDO1
UGDH
PRR15L
SIGMAR1
MYO18A
LIME1
TBC1D22A
RAB43
PABPC4
HMGCS1
MARVELD1
GATA3
POR
ZNF184
APOA4
CHKA
GLYCTK
KLHDC2
PERP
SCLY
TRPM1
CAPN2
KYAT1
TST
MPST
GNAT1
FRG2C
ZNF710
TRIM15
TRIM10
ASL
GSE1
FUOM
STK24
ABAT
WAS
SLURP2
GNG4
APOL6
DAND5
LPP
TM4SF5
MRPL33
CPNE7
DNAAF2
NR1D1
PEPD
GAPDH
SEPTIN9
LRRC8A
PALM3
ETFB
TPCN2
ETFA
DOCK5
NFATC3
HNMT
TACR2
SLC35D1
APOC2
SARDH
DMAP1
SMAD3
STAT5B
PAAF1
COA4
MOV10L1
CYB5R3
ATP5MGL
PIEZO1
APOC4
KHNYN
CBLN3
GAL3ST2
PER2
RBFOX2
CPPED1
MAN1A1
RBP5
CLSTN3
PON2
MCF2L
CDR2
SMLR1
INF2
VWCE
CBY3
PTK6
MYD88
ACAA1
ZSCAN2
C12orf43
RBMS1
ITPK1
GLI1
INHBE
MBL2
FAM168B
PLEC
STARD7
RNF126
LRP1
TNS3
ZNRF1
VEGFA
PXYLP1
CORO1C
TMBIM1
ANK2
WDR59
ADRB3
DZIP1
DPP6
TMEM270
SLC28A1
NOMO2
MAF
SMIM19
SLC20A2
TADA1
GIPC2
IL7
WSB2
FNIP1
MFSD3
GPT
GATA4
ARHGEF16
EFNA2
IL4R
CA9
POLR3H
SLC6A12
COL5A3
CLDN14
PLEKHB2
MACC1
CDH17
IL6ST
TRAF4
GTF2I
TNRC18
LOC100129484
TRIM47
AGPAT3
CST3
AK4
IRF2BPL
STAP2
MPND
FAM83C
EIF6
RASSF5
LAG3
USP18
MESP2
BRMS1
LZTS3
MIDN
SCN9A
HIC2
KDELR2
ZNF764
B4GAT1
CLDN1
PROZ
PALM2AKAP2
TFR2
SERINC2
CRK
SLC12A7
BRCA1
SLC36A1
RBSN
PSMB10
LCAT
PLA2G4C
UBA6
AKT2
ETNK2
NGEF
LY6E
AFP
NMD3
H4C3
H1-6
CCL14
CYP1A1
KIAA1522
IYD
POLD4
PAH
ASCL1
TRAF3IP2
SLC2A4RG
MST1
APEH
MOGAT3
PLG
DONSON
RUVBL1
CPNE6
GPC3
ELF5
DLGAP4
ERF
SLC12A9
DPYSL4
HGD
TK1
AFMID
SPATA2
ATP8B1
ATP11A
RTN4RL2
MAGI2
MYL12B
C2orf88
TMEM254
RSPH10B
RSPH10B2
BCL2A1
UHRF1BP1L
NRXN2
MUC20
PPP4R3A
NPDC1
ENTPD2
ZDHHC19
SLC51A
TJAP1
GGT1
INTS9
HMBOX1
DNMT3A
SAR1B
PTGDR2
TRIM26
CXADR
SPAAR
HRCT1
AMACR
CDX2
NOL4L
LRP5L
TMPRSS2
HSD17B11
USH1C
OTOG
APOE
RBIS
ECE1
C11orf86
GCAT
SEMA4C
PKLR
FDPS
SEC24A
LINS1
ASB7
PRAP1
GNA11
TLCD4-RWDD3
TLCD4
EEFSEC
LYRM7
HINT1
ZFAND2B
SNTG1
DYNC2I1
IGF2BP3
CCDC3
PDPK1
RNF217
DGKD
ZFP36L1
RCAN1
FGFR4
SEC16B
PYGL
PTMS
GPR35
PHACTR4
JOSD2
EPN1
IDH1
LIMK2
CLDN19
DCUN1D1
PFN3
F12
TMEM37
QPRT
CNNM2
SMIM11B
SMIM11A
SH3YL1
ACP1
OPTN
SLC9B2
MYADM
ASPDH
GPER1
KLF3
CBX4
TNXB
AP1B1
KRT8
CHN2
FKBP7
MTMR4
SPPL2A
IL1R1
ZNF512B
BAIAP2L2
PTPA
CRAT
ANK3
BLOC1S5
AHDC1
EPHB4
ALB
GDA
SOD2
INPP1
NHSL1
ERGIC1
SHFL
NPPA
ADGRG7
SPPL2B
LSM7
H6PD
ABCB4
PGPEP1
LRRC20
APOC1
DENND10
MRGPRF
NIPSNAP1