ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RBM39 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◣ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◢ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

WDR74
PMF1-BGLAP
PMF1
FRG2C
FRG2
SNRPB2
H4C2
H3C2
H2AC4
H2BC12
H2AC12
CCDC200
H4C11
H2BC11
H2AC11
MTRNR2L8
MTRNR2L1
H4C12
UNC45B
DUX4
H4C14
SPATC1L
H4C15
MTRNR2L2
MSH3
DHFR
H2BC21
H2AC21
H2AC20
EXOC2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H3C12
H2BC17
H2AC17
NGB
TMEM242
NPAS4
STX16
RPS12
PRDX1
SNX16
EIF1
MTRNR2L9
POLR3E
H2BC5
H1-4
PEX3
ADAT2
CNOT3
H1-2
MED23
H3-3B
NSFL1C
ABCC6
IQSEC3
SRSF6
PSMD3
SRSF7
FUS
TOP3B
MRPL44
MAT2A
EEF1A1
UNK
H3C15
H3C14
H2AC19
H2AC18
RPS20
KANSL3
FER1L5
CTNNB1
IPO4
GTF2H2
PSMF1
DMAP1
CPPED1
PALB2
DCTN5
HSPA1B
NOTCH2
CCNI
PDE6D
COPS7B
OR2T1
SRSF2
MFSD11
RPS15A
UBC
FAM53C
CDC25C
CALM2
AAR2
RPL5
SLC9A1
CLTC
METTL25
CCDC59
ZC3H6
NXF1
METTL9
ZBTB4
SRSF3
SLC35G6
POLR2A
POLDIP3
MTF2
CBWD5
CBWD3
DDX1
MTIF2
NME1
DHRS2
CCDC88A
RBSN
CBWD6
TRIP4
ADARB1
PLEKHM3
PRMT5
STX18
GTF2H2C_2
GTF2H2C
BRD2
P4HA1
RPLP0
H2BC8
H2AC8
SLC39A3
ZSCAN12
ATF4
RPS3
POLR2J3
SCFD1
RPSA
NUF2
H3C4
H2BC7
H2AC7
SLC24A1
SCAND1
ENOSF1
JPT1
ZNF76
KDM8
RABGGTA
EIF2D
H3C10
MTERF4
BMS1
PET117
PCK2
NRL
KAT14
MARCHF7
MBLAC1
WTAP
SOD2
NABP1
E2F6
HERPUD1
COL23A1
MRPS23
PBLD
HNRNPH3
RBM39
TRIM48
INTS12
GSTCD
DCAF10
C1orf198
H4C3
H1-6
CYCS
ZCCHC4
HSPA5
RPLP1
FRA10AC1
MRPL39
HNRNPA2B1
H2AX
CBX3
H2BC14
H2AC14
ACYP2
FAM98B
H2BC13
H2AC13
SCGB1C2
SCGB1C1
DPY19L4
SLC35C2
TMEM167B
KMT2E
STAT3
EGR1
H4C5
GTF2A1
MTHFD2
ARL6IP1
TMEM230
NDUFS7
TUBA1B
USP30
MUC3A
TMEM41A
YARS1
S100PBP
H2BC15
H2AC15
SNRPB
GTF3C3
NUBP1
H2BC4
H2AC6
TNFRSF21
RPS23
ATP6AP1L
TACO1
SMARCD2
IER5
RPS2
RNF151
NBPF1
HSPE1-MOB4
HSPE1
HSPD1
ALKBH3
MDP1
CHMP4A
MANBAL
SCML1
MAMDC2
TTPAL
ATF7IP2
RPL37
MAN2C1
TATDN3
NSL1
TAF1D
C11orf54
RWDD1
RAF1
ZNF391
DTD2
ZCCHC3
NUP214
HSP90AB1
HEATR5A
CDK5RAP1
MRPS31
RIF1
OXA1L
NDUFC2-KCTD14
NDUFC2
TIGD1
RPL23A
RAB34
EIF4E2
TTI1
RPRD1B
RBM28
ZKSCAN2
DDX5
CEP95
NANP
TEFM
NASP
CSKMT
C11orf98
RPS16
KIF16B
RGPD8
RGPD6
RGPD5
C14orf93
RPL37A
ACTB
PTCD1
METTL8
DCAF17
CPSF4
UBE2F
GTF2B
SLC25A21
MRPL3
FAM133B
FAM227B
DTWD1
INO80C
COMMD1
CCT4
ATR
ARL15
TRPC4AP
C12orf73
PAXBP1
TSGA10
HECTD1
PPP4R3B
RPL23
MRPS15
SLC25A51
GSTA4
CCNL1
EIF4A2
CCNC
SLC39A10
STX10
MTMR2
IER2
GTF2IRD2
VPS52
RPS18
B3GALT4
RPL10A
CRKL
RMDN2
ZKSCAN8
KMT2D
C2CD5
TRIM25
PDE11A
C6orf62
SRCAP
RUSF1
LOC730183
MCL1
DRG2
C6orf226
YDJC
CCDC116
UBE2D3
RPL12
MOB4
LRSAM1
EIF4A3
UBE2S
TBC1D19
RPL19
CACNB1
KPNB1
GDAP1
PTPN6
C12orf57
SSBP1
RRP15
HNRNPAB
VAMP4
H3C13
H2BC18
AJUBA
CCDC97
ZNF384
SRSF11
ZNF609
RPL31
ANKRD36C
HNRNPH1
EIF2B3
ATXN2L
PSMD14
MRPL40
HIRA
RPS8
RPL3
EIF4G2
SNAPC5
SLC30A6
SEC14L1
ASXL1
SURF6
GTF2H4
DCLRE1B
ATF3
AP4B1
ARHGEF12
RGPD2
RGPD1
MIA2
LDHA
UBFD1
TOB1
SMIM12
EARS2
TMEM18
SF3A3
PRAME
AP1G2
UBOX5
STX6
PIP4K2B
FASTKD5
ZNF337
SECISBP2L
POLR3B
TUBA1C
SREK1IP1
LRRC59
CWC27
LUC7L2
DGUOK
PPP1R3E
NCOA7
FOS
BCL2L2-PABPN1
BCL2L2
SIRT4
WDR11
ERCC6L2
TOB2
GLUL
INO80D
H2BS1
PARK7
MRPS33
SEC13
GOSR2
CTR9
STMN3
RTEL1
TTC4
TUBGCP3
SLX4IP
MKKS
KIAA1586
RTN4
PLK1
DARS1
ACIN1
PRADC1
CCT7
EDC4
MRPL16
GTF2IRD2B
SRSF1
PABPC1
NBN
TJP3
PCIF1
WDR31
ITGB3BP
EFCAB7
ALG1
ANKRD36B
RNF6
LRRC37A3
GDF15
RAB37
RPN2
MROH8
MECOM
HAUS4
EIF4B
U2SURP
SYT7
ZNF219
TMEM253
DHRS4L1
GTPBP10
GABPB1
CHGB
CEBPE
C2orf88
ZSCAN30
AURKAIP1
ANKRD36
DHRS4L2
TINF2
SLC44A1
SKP1
PSMA6
POLG
WASHC1
TAF15
MRPL58
ZMPSTE24
USPL1
TMEM267
SYS1
HMGB1
DNAJA1
APTX
EIF2S2
AARS2
RPS7
RPS3A
NDE1
MARF1
SMARCE1
RFXANK
DCP1A
BORCS8-MEF2B
BORCS8
TMEM101
GCLC
THOC1
PGBD1
HINT3
EXOSC6
TEX9
RFX7
ARL14EP
IRF9
CSNK2A1
RBBP6
NCOA3
HUS1
ALG10
C14orf119
YTHDF2
UGP2
DHRS4
CBWD1
THUMPD1
PCBP2
TRA2B
PAFAH2
C17orf75
ANKRD46
ITPR1
RPL32
GINS3
DDX19B
CCN2
AARS1
SAR1B
NFYC
GMNN
DCAF11
REXO5
ERI2
SNX5
MGME1
PPP2CB
CCDC125
HDAC4
ZNFX1
SPOCD1
C10orf88
BRWD1
ATP5MC2
SLC16A1
RBM45
NOMO2
XRN2
CFL2
CZIB
TOR1AIP2
TOR1AIP1
LZTR1
PPIH
RBL1
TUBB4B
PKP4
CCDC148
TRMT11
RPL15
NKIRAS1
WBP1
SF3B6
INO80B
FAM228B
VTA1
NMBR
PRORP
PPP2R3C
PIGBOS1
PIGB
PDRG1
STAT1
NAGK
PARPBP
NUP37
COQ7
CITED2
CIRBP
SLC9A8
PPIA
NFE2L2
NPM1
ZNF451
PCTP
HNRNPC
CSTF1
AURKA
TMEM216
MKRN3
DIDO1
IMPDH2
C19orf48
VRK2
STXBP4
RPL38
COX11
SPHK2
RTN4RL1
RPL18
FAM83E
DPH1
VPS16
RDH14
PCED1A
TSC1
PSMC5
GFI1B
FTSJ3
STAM2
ASH1L
ACVR1
RAD54L
PBK
NOMO3
TAF3
NEU1
GORASP2
ZC3H10
RPL41
NACA
AGK
MYL12A
ISOC1
MTX2
TBP
PSMB1
UBE2L3
SEC23A
ZFP64
WDR36
TPK1
SULT1A4
SULT1A3
SLX1B
SLX1A
MTHFD2L
BOLA2B
BOLA2
OTUD7B
BOLA2-SMG1P6
UNC50
COA5
CDH24
OAZ1
NDUFB10
FTL
MRPL35
IMMT
FMC1-LUC7L2
FMC1
ZCWPW1
ZC3H15
MEPCE
DCPS
RTF2
REPS1
APBB2
SENP1
PFKM
NT5DC1
KAT7
IST1
HDDC2
TANK
MRPL21
MAIP1
MAGEF1
IGHMBP2
GBA
ERMARD
VWA8
THAP9
SEC31A
PUM1
MEMO1
ZNF248
SLC38A2
SFPQ
RANBP9
DR1
TRDMT1
MIPOL1
LIMS1
BIRC6
SLC35B1
PRDM7
PELO
ITGA1
FAN1
CLK1
SDCBP
RBM34
FAM83D
EIF3C
TNPO3
AFF1
ZFHX2
THTPA
CRBN
TBPL1
MTERF1
DSTYK
ZSCAN9
MRPL52
SDR39U1
PPIL2
MAML3
TMEM254
SON
KANSL1
GART
GPN3
FAM216A
COG2
MRTO4
EMC1
NECAP2
HEXIM1
DENR
CHMP3
TMC4
TMBIM4
PTRHD1
NUDCD3
CENPO
TMEM209
SSMEM1
SPAG11B
SLC1A5
IARS1
HEXIM2
TFRC
SUPT3H
SREK1
SGF29
PARP2
NCL
MMADHC
KAT6A
OLA1
NXT1
ATXN7L2
UCKL1
EAPP
NUDT4B
NUDT4
DUSP1
CHD2
CASC3
AGL
RNPS1
RBBP9
TEX14
STAMBP
SRP54
RAD51C
ITGAV
TMEM238
RPL28
ACBD6
ZFP1
TRIP12
METAP1D
GFOD2
FBXO36
AHCY
RPS10-NUDT3
RPS10
MICU2
ARID1A
PTP4A1
CHD8
PNN
CHEK1
CFAP20
TMEM94
G2E3
RRN3
JRKL
CCDC82
PKIG
MFF
GGA2
RPL17-C18orf32
RPL17
KPNA2
ID1
C18orf32
XKR7
WDR43
NOMO1
MST1
INTS2
E2F3
CUL7
ADRA1D
PRICKLE4
FRS3
DDX18
RAD54L2
APOB
SLC20A1
PYROXD1
PHIP
NOP56
DDAH2
POMZP3
LMAN1
PHF19
NOL10
KMT2A
FUT10
CCAR2
C8orf58
ZSCAN31
SLC3A2
RNF103-CHMP3
RMND5A
REV3L
RAP1GAP
H4C4
C11orf49
ADPGK
PPP1R11
MTLN
CUL9
TMEM222
RPL22L1
RALGAPA1
MRPS11
MRPL46
FERMT1
PCF11
WFDC3
UTP4
TM9SF1
DNTTIP1
DERPC
CMTR2
CHTF8
SLC12A5
CCDC115
RPL11
PVRIG
PSMD5
ERGIC3
BNIP1
RGL2
KAT8
TUFT1
TMEM170A
SNX11
LATS1
RAB5IF
PUS10
PEX13
NR1H3
EIF1AD
BANF1
ADI1
ACP2
MAPK1IP1L
CHMP7
RPS27
RAB13
PSMD7
BCAS4
GCFC2
DYNLRB1
TMA16
MRPS35
LSR
LINC02210-CRHR1
FN1
TRAPPC6B
KDM3A
IER3
FLOT1
TEP1
NDUFS3
NAA20
KBTBD4
TGOLN2
EEF2K
CDC7
ZNF184
TBC1D5
RSPH3
RNF146
PPP5D1
CALM3
ATP5F1E
TRUB2
TPR
ODR4
FZD1
COQ4
USP40
C5orf24
SEC62
POLR2C
MED15
ZNF518A
WWOX
POLR3D
NPIPB9
TMEM177
FOXJ3
WIPF2
TTC26
TMEM186
SMIM8
SMG7
PMM2
PTPN4
HSP90AA1
SUGCT
PFDN4
MPLKIP
BTG1
SKIV2L
RABL2A
NELFE
DDX3X
BECN1
TOX4
RPS6
RAB2B
ANKRD40
AMMECR1L
RBM12
CPNE1
MSANTD2
MRPL48
FBXW2
TTC21B
TMEM14B
TCF12
BRMS1L
TOP1
RPL9
PRKRA
PRKAG1
PJVK
MRPL45
LIAS
DNAJC16
CASP9
VSNL1
SNRNP200
ANKRD17
VPS72
PNP
PHF3
MRPS7
KCTD5
GOPC
GGA3
CYP20A1
CCDC90B
ZNF124
FER
TDP2
TANGO6
RREB1
RPL27A
GPN1
CCDC121
AGFG1
ACOT13
THADA
KCTD18
ELK4
CSE1L
CCNG1
ZNF23
SDCBP2
SACM1L
RPL27
RIPK1
MED4
C1orf115
GZF1
CYLD
ABT1
VPS13B
PTPN2
MCM7
AP4M1
CCNG2
ATAT1
ZCCHC9
RPS4X
NUP62
IL4I1
GINS1
GID8
ATF5
NDUFV2