ChIP-Atlas: Target genes

Potential target genes for HOXA3

Query protein: HOXA3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478484 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXA3's Target genes

◢ HOXA3: Average

◢ SRX10478483: Hep G2

◣ SRX10478484: Hep G2

◢ HOXA3: STRING

NPAS4
DHX36
UBA52
AP2B1
PRPF38A
ORC1
XKR7
NOC4L
DDX51
CCDC86
TBL3
RNF151
CWC25
MVK
RNF166
CTU2
RRM1
CAMLG
STK38L
HINT3
IQSEC3
ENOSF1
BRAF
RANBP2
PDE4A
NUP153
RRNAD1
ISG20L2
KAT7
TOR1A
SSU72
NBEAL1
HOMER1
MTURN
LEMD2
APTX
USP36
CSTF1
AURKA
POT1
PEF1
MTERF4
MRM3
GLOD4
RALGAPA1
ESYT2
METTL3
VPS37B
ZBTB21
GALNT11
SPTY2D1
ZNF593
C1orf232
AIG1
PRMT9
S100A13
CHTOP
JOSD1
GTPBP1
ELL2
HIRIP3
INSM2
MORF4L1
PTBP1
ZSWIM7
TTC19
MRRF
FANCD2
OXSR1
ZNF547
TRAPPC2B
ILRUN
BLOC1S5
DDX19A
STX4
TVP23B
TMEM91
B9D2
HES4
SHLD1
ELOVL5
MRPL55
OGDH
HTR5A
SF3A1
CCDC157
PPIG
TRIAP1
RBKS
BABAM2
XRCC6
DESI1
COQ7
KIF15
KIAA1143
CCDC174
TM9SF4
ZZEF1
CYB5D2
MORN4
RNF139
ING4
STK19
DXO
COPS8
NARS1
NKX1-1
RPA2
PRR14
LIN28A
JOSD2
ASPDH
RCE1
SSNA1
ANAPC2
SIK1B
SIK1
C9orf72
ATP9B
SCYL3
HAUS5
ZNF548
UBR4
H2BC15
H2AC15
MAGOHB
ZNF268
PRKCSH
CCDC151
COX18
GUK1
ZNF721
PIGG
RIF1
MAP3K13
SEC23B
FAM24A
CDC5L
RAB37
ESCO2
CCDC25
C1orf174
HECA
ADGRG3
CSNK1G2
RFX1
NUDT18
PRORP
PPP2R3C
RPS27
RAB13
SEPTIN7
AP5S1
ST7L
CAPZA1
PDE7A
GZF1
POLR1H
JARID2
PAK1
FAM177A1
TMUB2
ATF1
TMEM259
CNN2
ZBTB40
MFF
THAP4
ATG4B
CATSPERG
VPS16
PCED1A
GHITM
ZNF747
RTF2
MAGOH
IDH3B
TRMT61B
SLC30A9
IWS1
COX8A
AP1G1
PREPL
CAMKMT
MMADHC
HACD2
RANBP6
TRMO
ZBTB11
ZNF764
ANAPC10
ABCE1
CRADD
TPGS1
METTL25
CCDC59
PSTK
TMEM39A
POGLUT1
CSDE1
MAP3K2
THUMPD1
DDX18
PSMB5
TSSC4
PCNX4
SRRD
HPS4
GUSB
RFC1
ZC3H6
IMP4
CCDC115
RPL12
LRSAM1
NAF1
OPA3
CLK1
YTHDC2
TBC1D17
AKT1S1
C16orf91
CCDC124
TXNDC15
KAT8
XPO6
RLF
TTLL11
CCNL1
RPL21
GTF3C3
ZNF426
FEM1A
CREB1
TFCP2
DGUOK
PARP2
SPAG4
WARS2
MRPL21
IGHMBP2
TRMT10C
STX16
LRRC59
PSMF1
NECAP1
AFTPH
HAT1
SNRPD1
YTHDC1
BNIP1
CCNT1
KDM3A
WFDC3
DNTTIP1
SF3B5
GLRA1
EFCAB2
SLC39A9
ERH
SKIV2L
NELFE
ZNF507
SAR1B
RAD23A
SRSF5
TPT1
SDF4
B3GALT6
NSFL1C
NOP58
ACTR5
MCMBP
E4F1
PPIL4
GTF3C6
LDAH
FAM200A
CDK11B
CDK11A
NOLC1
ECH1
SELENOK
IPPK
NHLRC1
RPF2
USP31
TBCCD1
DNAJB11
CYCS
PXT1
KCTD20
BIRC2
C2CD5
SSR4
IDH3G
CELSR3
SLC25A3
MTF2
ZGRF1
LARP7
NUP35
CHGB
NUP214
KIFC1
SMIM17
ARMC5
MRPL44
ZDHHC7
NOP9
DHRS1
DYNC2I2
DUS3L
NDUFS5
GTF2H3
EIF2B1
NDC80
METTL4
LRP2BP
ANKRD37
HOOK2
RNF40
CCDC189
L1CAM
TSSK6
NDUFA13
TUBGCP6
MZF1
MIA2
SCAF8
ADK
PSMD8
CPLX2
NUP133
MFSD13A
SNAP25
TRIP4
SCLT1
C4orf33
RMDN3
BDP1
TEAD1
WDR33
THAP9
SEC31A
EIF4A1
ZNRD2
FAM89B
THOC1
TOR1AIP2
TOR1AIP1
KNL1
ENSA
SON
GART
TMEM230
RAB11B
STX18
FLNA
EMD
CCNH
PELP1
FRG2C
SPRYD4
LUC7L3
IMMP1L
ELP4
NDUFS7
N4BP1
RBM25
PRRC2C
ANKRD13C
PPP2CA
SNRPC
LRRC37A3
TRIM52
CTNNB1
CDK5RAP2
CUEDC2
TUBB
MDC1
RPL24
CNNM2
NCOA5
LYRM1
DCUN1D3
CACYBP
DNTTIP2
TBP
PSMB1
ATP1B3
KPNA5
POMZP3
ESCO1
LOXL3
DOK1
AARS2
KMT2E
SLMAP
RBM42
TSPAN31
AGAP2
PRPF38B
TMEM101
ARIH1
DUS2
DDX28
LSG1
PEX12
DHDDS
DDX1
KCNH7
FBXL19
NAA60
NKIRAS2
DNAJC7
PHF20
ARG2
KPTN
FAM149B1
ECD
RPS6KB2
DDX42
CCDC47
NME1
SNRPB2
RBM12
CPNE1
CHD2
ZNF76
USE1
COX7A2
MRPL4
DUS1L
TTC17
BAX
COMMD1
CCT4
NDUFB5
MRPL47
OR6B2
NDUFA10
HPS5
GTF2H1
ABT1
SLX4IP
MKKS
C1D
ZNF337
LONP1
CATSPERD
PSKH1
MIGA1
LRRC57
HAUS2
FBXO34
TVP23C
TMEM131
WBP1
INO80B
AASDH
RAF1
TRMT44
ACOX3
ATP6V0A1
SARAF
NR3C1
PPP1R15B
TOMM6
PRRT2
PAGR1
MVP
SCFD1
ZNF23
R3HDM2
INHBC
BCAS2
FRA10AC1
NDUFAF5
ESF1
ZNF165
WDR7
DPAGT1
C2CD2L
RPL9
LIAS
NTSR2
EPHA10
BTBD9
UBE2J2
WDR36
CBARP
ATP5F1D
ZNF501
OXA1L
ZNF2
MAP1LC3B
FBXO31
HEXIM2
SCRT1
AHCYL1
ZNF410
VCPKMT
EXD2
RNF44
CDHR2
RPL23
PURB
YTHDF3
RRP1B
HSF2BP
PTRHD1
CENPO
NUS1
SNU13
TTI1
RPRD1B
PTPN4
TUFM
SH2B1
CBWD5
CBWD3
CBWD6
NDUFS2
ADAMTS4
ARPP19
SRSF11
LRRC40
INTS12
GSTCD
GARS1
RBM39
NELFA
CPPED1
MDP1
CHMP4A
ATP5MC1
TSGA10
SETD4
CIPC
SRSF3
STRAP
NDUFB6
TBC1D15
RABGGTA
CLASP2
RACGAP1
CREM
RALGAPB
CLTC
TAB2
ANGEL2
MTRNR2L1
GTPBP10
SETD3
CCNK
PPP1R21
HTATSF1
EAPP
LCMT1
TMEM79
SMG5
STARD3NL
OTUD6B
ERCC5
SNX5
MGME1
METAP1D
YWHAE
UBE2V2
NCAPH2
LMF2
SECISBP2
TRA2B
CCDC200
MRPS10
ZNF614
CPEB4
SMPD4
MZT2B
TRMT5
SLC38A6
TRAK2
STRADB
NRF1
CBWD1
PDE4DIP
BMS1
SMC3
CCDC88A
RARA
ADNP
MRPL2
KLC4
LRRC8A
KYAT1
PCBP1
PINX1
PABPN1
LSM5
AVL9
PEX3
ADAT2
RPRD1A
ATAD3B
FDXACB1
C11orf1
DCTN4
NDUFA12
ZNF606
CFAP20
NFX1
WRAP53
TP53
RNMT
FAM210A
TATDN3
NSL1
ERMARD
C12orf66
N4BP2L2
MBD4
IFT122
ZC3H11A
ZBED6
CKS2
PIGU
GOLPH3
DLD
STRIP1
ZDHHC3
EXOSC7
CENPW
NEK1
MRPL20
ACTR3
CYSTM1
POLR1F
PGAP2
MANF
UQCRQ
GDF9
ZNF274
SRCAP
LOC730183
SPG11
MTHFSD
USP7
ARFGEF2
TDRD7
DUSP3
CFAP97D1
FBXO38
STK25
MAPK8IP3
ERLIN2
IPO11
CCDC150
UFC1
TBC1D2
RPS11
H4C12
TMEM237
MRPS35
DCP1A
ATG16L1
NOL7
CCAR2
C8orf58
CDK5RAP1
ZNF264
SF3B6
FAM228B
PRPF8
PCIF1
INTS8
NSUN4
ZFX
CMSS1
GTF3C2
TEKT2
ADPRS
AAR2
ATRN
RNPS1
THADA
MRPL3
USPL1
HMGB1
MFN2
TACO1
FCF1
AREL1
RANBP3
SAMD10
PRPF6
ATF6
ACAD9
MRPS18C
HELQ
LCLAT1
DRG2
TTC1
CMTR1
HNRNPUL1
RBSN
SLC17A5
MRPL58
TPD52L2
ABHD16B
RPS7
CELF1
OXNAD1
DPH3
DHX40
ZC3H4
RCHY1
OST4
WDR75
BBS1
ZNF19
NBR1
CEBPZ
SIRT2
NFKBIB
U2AF1L5
U2AF1
ZNF384
GPSM3
OPA1
FOXJ3
CHCHD5
ADPGK
ABCC10
MKS1
USF1
FAM187A
EFTUD2
CCDC103
SYAP1
MAP2K1
CDIP1
NDUFAB1
BCL2L13
RCAN1
RBBP6
PCID2
CUL4A
RAB5A
EFHB
IFT172
PFAS
CTC1
LTB4R
CIDEB
UBAP2L
C1orf43
GOSR1
TMEM242
NUF2
TRMT12
SNRPB
TPRN
TMEM203
NDOR1
RPL13A
CDC14B
SFPQ
HDAC4
MRPL53
COQ5
NUDT3
ASPSCR1
MED20
BYSL
RPL27
NGDN
ZNF891
ZNF10
GID8
DIDO1
TANGO6
RPL14
RPL31
MTG1
ELOB
SF3A3
ZNHIT2
MRPL49
FAU
EXOSC9
CCDC107
CASC3
C5orf15
AKAP9
DLGAP3
DIABLO
CTCF
SPTLC1
RHOT2
BARHL1
MDN1
DUX4
BIRC6
METTL9
MRPL52
SRRM1
RTBDN
PET117
KAT14
GPR137
EIF1B
ZSCAN30
UNG
ALKBH2
SEC23A
RAB22A
SCRT2
FARSA
CALR
ANKRD17
ATXN1L
TDRD1
CCDC186
ABHD12
SASS6
XRN2
TXNL4A
RPS28
NDUFA7
EIF3E
KNOP1
RAD54L2
PLEKHM3
H4C4
H2BC6
NDUFV1
PDE6D
COPS7B
ATAD3A
SPHK2
RPL18
BRCA1
TMEM170B
THAP1
AP3D1
NUCKS1
TIGD1
EIF4E2
STAT3
WTAP
SOD2
TBC1D32
WDR53
FBXO45
TBC1D13
ZNF780A
LMLN
IQCG
MICU2
CDADC1
SEC13
CWC22
FAM122C
ZNF484
SRPRA
MED25
FUZ
WDR74
RRP1
SSBP1
EIF4G2
ZCCHC9
HERPUD1
TJAP1
MTLN
ARF4
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PCNP
UFD1
CDC45
MCM10
TMEM198
CHPF
MPDU1
LOC100996842
CD68
UBAP1
MIOS
MED23
TINF2
PGBD4
EMC7
C2orf49
LTV1
FAM227B
DTWD1
MANBAL
PARL
HIPK1
MTIF2
B4GALT3
TRAF3IP2
NCBP3
RAB5IF
VPS29
RAD9B
KCNK12
TBRG4
KLHL15
LSM2
SLC25A21
DDX46
BPTF
CHFR
TIMM10B
TRAF4
NAPEPLD
FASTKD1
RPS14
GAR1
MMUT
CENPQ
RFC2
TPM4
TMEM217
TBC1D22B
PRSS27
COMMD2
VPS33A
TFPT
PRPF31
COQ9
CIAPIN1
PHF3
OGDHL
NCBP2AS2
NCBP2
NRBF2
USP6NL
DUS4L-BCAP29
DUS4L
COG5
DCAF10
AGPS
RHBDD1
ATP6V0C
PPWD1
CENPK
FAM131A
MRPS33
ZNF562
RFC3
TAF11
ANKS1A
NAT10
SOCS5
ZNF524
FIZ1
NOL10
DHX15
MRPL39
MNAT1
LRRC29
DNLZ
DNAJC11
ZNF394
ZKSCAN5
MRFAP1L1
MED27
YY1
SNX13
SEC62
ITSN2
NFYC
PRMT5
AATF
UBE2H
ICE2
C12orf73
IPO4
PSMB2
NOP53
U2SURP
TPGS2
RPS13
UTP15
ANKRA2
KIAA0895L
ACSF3
USP14
TP53BP1
CLUAP1
C16orf90
GOT2
C17orf75
CLN5
NSUN5