ChIP-Atlas: Target genes

Potential target genes for RFX3

Query protein: RFX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RFX3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RFX3's Target genes

◣ RFX3: Average

◢ SRX2636179: Hep G2

◢ SRX2636180: Hep G2

◢ SRX23177031: PLC/PRF/5

◢ SRX23177032: PLC/PRF/5

◢ RFX3: STRING

MTRNR2L1
C1orf159
TMEM9
ZBBX
NPAS4
CFAP54
NDRG4
LRRC6
ZNF497
CHURC1-FNTB
CHURC1
NEK10
PRR29
ZBTB46
TTC23L
POLD3
WFDC3
DNTTIP1
FOXJ1
MAPRE2
DYNC2LI1
KLHL18
KIF9
SDCBP2
PITPNM1
TTLL9
POLL
DPCD
PDE4A
CFAP36
RUNDC1
PTGES3L-AARSD1
PTGES3L
C11orf49
CEP41
ACOX3
BTBD3
HSDL1
DNAAF1
SNRPF
LRGUK
KIF3B
MFSD4B
PIN1
FKBPL
ATF6B
POLRMT
NPHP1
ZSWIM1
DAD1
AHI1
BRCA1
LOC112694756
RAB11FIP2
DNAAF3
TEKT1
IQCH
AAGAB
IPO4
TOR2A
SPATA2L
MTRNR2L2
MSH3
DHFR
DYNC2I1
PES1
FZR1
EBNA1BP2
CFAP57
BBS1
CARS1
RHOD
ACTR6
MRPS2
C9orf116
INTU
EFHC1
PMVK
DYNLRB2
NME9
DNAH7
CSNK1G2
SPEF1
AGTRAP
TTLL1
CEP112
CCDC113
CCDC34
PSMC3IP
TRIT1
OVCA2
PRKCG
USP30
FANK1
TTF1
CFAP77
CTU1
ZFHX2
THTPA
C7orf50
DCP1B
RFC5
MEAK7
CCDC8
PRKN
PACRG
QTRT2
CCDC191
C16orf46
AP1S1
ADGB
SYS1
WDR93
PEX11A
MORN4
STK32C
LRRC27
LMBRD1
SHQ1
FAM110A
LRPAP1
ARFGAP1
UBXN6
ZNF84
CFAP69
UBXN11
WDR35
RSPH14
RAB36
JAM3
NRSN2
ABI2
MUC1
FBXW9
HSP90B1
AZIN2
LENG1
DYNC2H1
ANGEL1
TSNAXIP1
RANBP10
DYNLL1
UBE2O
AANAT
CSNK1G1
ABAT
DAGLA
CRB2
LRRC46
CCDC39
ARL6
SPAG8
HINT2
THNSL1
AGPAT5
TTC30A
TXNDC17
KIAA0753
BDP1
RALB
HSPH1
CFAP43
PFDN5
MYG1
SIK3
XKR7
EFCAB12
MOCS3
DPM1
NCOA5
RPL35A
IQCG
KIF23
ARMC3
SLF1
KIAA0825
SLC37A1
RSPH1
RPP38
FAM204A
SPAG16
KRT8
PREPL
CAMKMT
POMT2
GSTZ1
PPP1R21
SPEF2
TBCEL-TECTA
TBCEL
PIFO
DMWD
PCOTH
MIPEP
KATNIP
GTF3C1
TRIP12
FBXO36
E4F1
OTUB1
ZNF324
DNAJC1
C2orf73
NUCB2
NR2F2
RNF141
GTF2E2
INSM2
HMG20B
COG7
B9D1
STOML2
PROSER3
HSPB6
ENDOV
STK11IP
ZNF324B
WDR54
C2orf81
NUDT2
KIF24
TP53BP1
MIB2
NR1D1
YIPF3
POLR1C
ELMOD2
CHN1
PKIG
SF3A1
CCDC157
MAFA
CRNKL1
CFAP61
CALR3
C19orf44
KIAA1841
FAM24A
GPR137
TSPYL4
DSE
DNAJC16
CASP9
DUSP3
CFAP97D1
RNF40
MORN2
DHX57
CCDC189
PATZ1
CATIP
YWHAQ
PRKAR1A
TOM1L2
DRC3
SORBS2
PTPN1
FAAP24
CEP89
IQSEC3
CHCHD3
RALGAPA1
PER2
C17orf97
WDR31
PPAN-P2RY11
PPAN
ANGPTL6
SF1
TMX4
SRFBP1
SIPA1L1
DNAH2
CCDC130
TTC30B
VAT1
RND2
ETFRF1
CFAP94
TMF1
MOK
MBD4
IFT122
RFC2
PHC1
CCDC30
ZNF584
RHPN1
LIN28A
TADA2B
CCDC96
CYTH2
TMEM231
SMG7
IFT81
LRRC56
HRAS
L3MBTL2
IQANK1
FAM83H
CACUL1
TMEM107
PACRGL
KIF6
SYT5
ZNF473
VRK3
TASP1
FBXL13
ARMC10
DYRK1A
PRKAR1B
SEMA4B
KLHL38
RFX1
CFAP126
ZC3H10
RPL41
ARL4A
DRC7
RNF139
ENTPD5
BBOF1
FSIP1
TSEN2
TMEM53
ARMH1
LRRC73
H1-10
MIER1
DNAI4
ING2
PRMT5
YWHAE
CFAP53
IQCC
DCDC2B
CCDC28B
JUNB
NDUFA5
SPATA2
C20orf96
ID1
DNAJB13
TBC1D19
DYNC2I2
PRKCSH
KLHDC9
CCDC151
DLG4
ACADVL
ELP1
ABITRAM
TRIM36
GTF3C4
DDX31
SPATA4
CFAP58
NAA40
PALM3
KCNH7
ANO3
PHOSPHO2-KLHL23
PHOSPHO2
FBXL16
CCDC173
KNOP1
U2AF2
THOP1
SGTA
CFAP46
WHRN
RFX3
POFUT2
IFT22
ZNF184
ODF3L1
BTRC
DNAJA1
APTX
RPS27A
CLHC1
TTC26
FAM183A
OSCP1
CEP152
STK19
SPICE1
DXO
CEP162
SLC25A14
LOC728392
CPLANE2
USP54
PCSK1N
RPGRIP1L
PAK4
FTO
C20orf27
HMGN2
PCGF1
LBX2
IFT172
NDUFS3
KBTBD4
TSGA10
FBXW7
C2orf15
ARHGDIB
RTF2
MKS1
WDR73
NMB
NUMA1
LRTOMT
FOXN2
EFCAB10
SPATA13
ALS2
PRDM4
ITSN1
CRYZL1
SAXO2
EFL1
SFXN2
ARL3
LOC101928764
GTF2IRD2B
GTF2IRD2
POLI
CCDC65
ARRDC4
FAM214A
MARCHF8
TBC1D32
METTL15
KIF18A
BBS5
ORAI3
UBN2
KMT5C
NME7
BLZF1
TM9SF1
PPP1R11
TRAF3IP1
DYRK3
TPGS1
TFIP11
RPN1
ZNF768
ERF
HMGCR
DUX4
PJA2
MAP3K14
TMEM67
REEP6
PCSK4
VTA1
UVRAG
NMBR
LINS1
ASB7
ID2
PODNL1
DCAF15
FAM187A
EFTUD2
CCDC103
ACAP2
CLUAP1
C16orf90
PICK1
PCNX4
IFT140
CRAMP1
ODF2
RHBDD2
NEK2
FANCI
WDR90
MRPS21
PPP2R1A
TNPO1
YWHAZ
MORN3
CXADR
SLC25A27
CYP39A1
BAD
GAS8
DBNDD1
TMED8
SAMD15
PUM1
C11orf97
ZNHIT1
TCTN3
PLOD3
BCL2L1
NKX1-1
PIH1D2
NKAPD1
C16orf86
CCDC175
INTS8
AHNAK
MZF1
C16orf71
ANKS3
IQCE
IFT57
PCGF2
THAP10
LRRC49
AXDND1
SLC25A3
MTRNR2L8
HSPBP1
BRSK1
TBC1D16
CCDC40
TULP3
MNS1
ZFYVE28
CFAP99
ZNF24
SPG21
MCM7
AP4M1
MLEC
SPACA9
LPIN2
AK8
SIK1B
SIK1
PIK3R2
KLF16
NET1
C7orf57
TDRP
COQ7
TMEM234
EIF3I
TRAPPC2L
GALNS
EHD1
MSMO1
GNAT2
AMPD2
RER1
MORN1
MARCHF9
CDK4
MUL1
TENT5C
DBN1
PPP1R16A
FOXH1
SPCS1
RABL2B
GLT8D1
NEK11
ASTE1
FOXN3
PARS2
CCDC146
MCAT
TIGD4
ARFIP1
CATSPERG
EIF2S2
FAM151B
RRP12
MAP1LC3A
CDC37
PBX3
FAM86B2
TEX9
ABHD11
CFAP298-TCP10L
CFAP298
COPS3
VPS53
FAM86B1
DAAM1
PANK2
CCDC57
LRRC23
ZEB1
DUSP18
SPATA24
E2F3
RNF5
AGPAT1
GLRX5
ZNF446
CRIP1
PKP4
CCDC148
CYC1
PEF1
RBKS
BABAM2
ALMS1
HIGD2B
BBS4
LTV1
ZNF775
UBXN2B
PELI1
CFAP20
CEP295NL
MAPRE3
BAIAP2
ERICH6
TCTN2
PGD
SETD4
MSH5
CLIC1
SSBP4
ZIM2
SSC5D
PEG3
NAT14
CENPH
FAM185A
CCPG1
C15orf65
PPP1R42
SRSF7
CEP135
MYCBP
CALML4
NAA20
KIAA0319
CRYAA2
CRYAA
KIFC3
RUFY2
ITGB3BP
HTR5A
EFCAB7
DNAAF2
CCDC74A
THBS3
MTX1
SDE2
SREK1
MICOS13
HSD11B1L
MX2
LOC390877
GTF2F1
ZNF664-RFLNA
ZNF664
DZIP1
CCDC92
CEP126
ANGPTL5
TECPR2
CINP
LMAN2L
ZNF165
DNAJC10
RIN1
QTRT1
RASL10A
GOLGB1
GAS2L1
EIF2S1
ATP6V1D
FOXO6
FAM174A
SMARCAD1
WWOX
FBF1
DUSP6
BAIAP3
IFT74
E2F8
BRD3OS
ZNF862
NQO1
PLEKHB1
CEP164
SPATA17
GPATCH2
TRMT12
PRR3
GNL1
TUBE1
FAM229B
HSPA12A
ENO4
FAM227B
DTWD1
COPB2
MICOS10-NBL1
MICOS10
FRG2C
STK16
GLB1L
DENND2B
TRUB2
COQ4
MARK3
TMEM91
B9D2
STK36
RNF25
MID1IP1
ESRRA
TNRC6A
CHERP
TSPAN19
LRRIQ1
OSBPL2
C3orf49
POLR3F
FAM120B
DZANK1
ROPN1L
PLIN5
LRG1
NAP1L1
ARF3
POLD2
CELSR3
UBL3
JUND
FLACC1
WDR74
SHOC2
DNAJC24
DCDC1
BBIP1
BRMS1
B4GAT1
TIMM21
PIM2
LYRM4
FBXO15
FARS2
DSTN
BFSP1
TMEM88
NAA38
CYB5D1
BBS12
EPN1
POLR3H
COL23A1
RUFY1
DNAL1
TOR3A
CYSTM1
CCDC74B
AJM1
HM13
MYADM
PBXIP1
ZMAT2
ERI3
RNF223
DNAH12
FAM47E-STBD1
FAM47E
TCTN1
C2orf50
ZDHHC1
CYP46A1
NAGPA
HNF4A
SPAG1
SPATA6
RABL2A
TPST1
TEX264
PLCH1
UFSP2
SLC25A46
C4orf47
BSG
LMLN
ZNF76
DNAJC25-GNG10
DNAJC25
DNAH6
CNOT8
RAB3GAP1
PPP2R5E
FER
SERTAD3
TRIM39-RPP21
TRIM39
GNG3
BSCL2
PDCD6
ENTPD7
CFAP299
TOGARAM1
KLHL28
ARL13B
MTF1
GLRA1
CFAP157
MEAF6
IRAK1BP1
GNL2
SFI1
C4orf48
GEMIN8
XPR1
ICA1L
GDE1
CCP110
NEMP1
GPN1
CCDC121
NBR1
SYVN1
DNAL4
MDH1B
FASTKD2
SPATA7
HYDIN
REPIN1
MFSD6
P4HA1
EMC3
TMEM232
SLC27A1
ING1
DHX40
SPATA33
ARL2BP
PLA2G2A
SF3B5
NACAD
FHAD1
TPM3
WDR19
NDUFAF3
DALRD3
CENPS-CORT
CENPS
CCNB1
ZNF214
NLRP14
WIPF2
TAGLN2
CCDC188
TTC7A
MCFD2
NOXO1
GFER
GLIPR1L1
CAPS2
HSPA1B
FBXL14
ZNHIT2
MRPL49
FAU
ST18
CBX8
PLXNB1
STK35
CXXC1
TREX1
SH3BGR
LCA5L
CFDP1
G3BP1
WDPCP
MDH1
CEP43
ALKBH5
TMEM74B
IFT52
DIS3
TMEM134
WDTC1
L1CAM
PPP5C
SLC25A22
RSPH4A
GMPPB
AMIGO3
PPP1R7
PASK
DYRK4
LIN54
TOB2
SRF
LY6G5C
TTC5
ZNF396
CIRBP
PSMB5
PARD6A
ACD
TCTEX1D4
BTBD19
KCNN1
PLTP
IQUB
MBNL2
THG1L
KATNAL1
DNAAF6
RHOBTB2
KLHDC10
HDGF
PNP
SMIM5
TMEM209
SSMEM1
PPP1R32
HS1BP3
SLC35E1
WDR25
WARS1
CCAR2
UBE4B
CABIN1
WBP1
MPC2
INO80B
DNAH9
DCAF6
COMMD8
RSPH3
ELAPOR1
C1orf194
CLBA1
RTBDN
WDR13
PCM1
PCF11
ARMC2
ZNRF1
C19orf84
CDC14A
AP2S1
TNKS1BP1
PRRT1
PPT2
CRIP2
SPTBN4
TRAF3
CPD
RPF2
TAF6L
AP3D1
ZBTB40
THADA
TMX2
MED19
SSX2IP
TTC8
GET3
ZC4H2
MED31
C17orf100
KIF27
CCDC83
EPHA10
PNMA1
PWWP2B
USP2
JUN
TPCN1
IQCD
SDCBP
DIXDC1
GALK2
COPS2
DLGAP3
MAFG
EML6
CFAP74
CSTF3
TMEM95
KCTD11
ZDHHC11
GPSM3
NDUFA8
MORN5
CDADC1
CHD4
SMIM17
SLC7A6
UBFD1
PRR7
EARS2
GABARAPL2
UMAD1