ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475367 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◣ SRX10475367: Hep G2

◢ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
INSM2
MAMDC2
LOC102724770
DGCR6
HTR5A
NKX1-1
LIN28A
MTRNR2L1
FAM24A
FRG2C
MTRNR2L2
MSH3
DHFR
DUX4
WDR74
STX5
CPLX2
RAB37
CELSR3
CHGB
RANBP3
KCNH7
GLRA1
FRG2
SNAP25
MTRNR2L8
L1CAM
BARHL1
ARL4D
DLGAP3
TMEM242
CCDC200
EAPP
EPHA10
MUC3A
ZC3H18
SST
PPFIA3
C19orf73
MAPK8IP2
RTBDN
MAST1
CADM3
SMIM17
LHFPL5
CLPS
KDM3A
DNAJC6
CDIP1
ICMT
HES3
ZNF285
LEMD3
PTPRS
N6AMT1
SLC7A6OS
PRMT7
SIGLEC10
CCDC92B
CCNL1
ZNF23
GCFC2
ENOSF1
AFAP1
ZPBP2
IKZF3
COL23A1
STAT1
RNF130
MARCHF4
SLC12A5
CTDSPL
HES6
SSTR5
GDAP1L1
NPPB
VGF
CPQ
AATF
USP14
PIK3R3
EVI5
NTSR2
LPIN1
SRRM3
RIPPLY2
CYB5R4
HBQ1
HBA2
HBA1
PTPRN
POLR2J3
H4C12
H4C11
H2BC15
H2AC15
TRIM44
PMS2
AIMP2
WTAP
SOD2
FN3K
UNC80
KLF11
CHRM4
GTF3C3
C2orf66
SLC25A10
MRPL12
STX16
CEP295
EIF3B
FAM118A
RNF103-CHMP3
RMND5A
METTL15
KIF18A
CHGA
EPM2A
TASOR2
EXOSC6
GRM1
GJA10
NSUN5
OGDHL
CA4
CERS6
LMCD1
IPMK
CISD1
DDX1
ANKRD36
STK25
NRSN1
HDAC4
UBE2Q1
CHRNB2
NOMO3
ABCC6
ZFYVE27
SCRT2
DPY19L4
RAD50
NEUROD1
CNPY3
LTB4R2
LTB4R
CIDEB
CDK5R2
STMN3
RTEL1
TGM1
RABGGTA
LDAH
RFC1
SHOX2
SPNS2
HPCA
PPP1R3C
SLC39A3
BPIFA3
MYT1
TCFL5
TIGD1
EIF4E2
CMTR2
SP5
PTMA
ANK1
AKAP10
PMVK
HECTD1
MFF
TENT4A
SF3A3
ACTL6B
AAR2
RBM39
PGBD5
KATNA1
SLC3A2
USP30
SVOP
SCGN
CNTRL
C5
UNG
TCAIM
SLC7A7
MRPL52
ALKBH2
DTD2
PPY
FAM177A1
DHX40
THUMPD3
LRRC59
AARS2
NOC3L
RNASEH2C
KAT5
HDAC2
LCLAT1
PLEKHM3
CYP21A2
FMNL3
ZNF286A
DIABLO
TM9SF1
IPO4
TSSK4
ANKRD36C
AIP
SLC25A21
LUC7L
GID8
GET4
FAM234A
DIDO1
FANCL
PSMA1
PDE3B
SIT1
RNF187
CCDC107
ARHGEF39
NR1D1
NANP
USP37
CNOT9
RMND1
ARMT1
TMEM181
SCAMP5
DNAJC11
RGS19
OPRL1
LKAAEAR1
RBM28
STAT3
WDR36
SNRPB
ENO1
EBAG9
PTP4A2
INTS12
GSTCD
EFCAB13
SCAF11
C6orf136
TMEM186
PMM2
SOS1
SMC3
SAYSD1
MEIG1
DCLRE1C
MAP2K2
LRP6
VPS29
RAD9B
SUGCT
MPLKIP
IFNAR1
SPOP
PCDH8
DCP1A
LDHA
NUP62
IL4I1
ATF5
SPTSSA
RIPK3
NAA20
ADCY4
SCFD1
EIF4A3
CTF1
BCL7C
TSGA10
THNSL1
MAPK8
DHRS4L2
SPAG4
SCGB1D2
PC
NHLRC1
C1QL2
CTR9
HEATR5A
THUMPD2
POLE4
ZCCHC7
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
PPP2R2C
RPL31
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP4
PCLAF
TMX3
CCDC102B
TMEM106B
OGFOD3
HEXD
FGFBP3
BHLHE40
ODC1
NOL7
MTMR2
TRIM67
SLC9A1
RRP15
PEX3
NID1
GRIA2
ARL6IP1
ADAT2
E2F6
SNRPB2
PGRMC2
C7orf25
TOB1
MTERF4
DOCK6
TK2
CKLF-CMTM1
CKLF
C10orf88
QTRT1
IARS1
CACNA1B
MSL2
TAF12
ZNF501
HS6ST1
VRK2
NUP160
CDC16
ELOVL3
ABCA3
LRP2BP
ANKRD37
TOLLIP
RXRA
PIKFYVE
PDE4C
NUBP1
NREP
RSPH3
GOPC
FAM98B
CABP7
WASHC1
MRPL44
ZFP1
WDR31
SRP54
CUL5
BSPRY
AP5S1
CDK5RAP1
FUS
URGCP
UBE2D4
OSBPL8
L2HGDH
HELB
GMCL1
DMAC2L
AKAP11
DNAJC10
TRIM8
SPHK1
NPIPA3
NPIPA2
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
HBS1L
PTPRH
MAT2A
MAP2K3
CLVS1
LAMTOR5
NOP56
H4C14
H3C15
H3C14
RETSAT
PARD6A
MIPOL1
LMLN2
G2E3
FTCDNL1
ELMOD3
CHD9
C16orf86
C14orf119
ACIN1
ACD
ZKSCAN8
PMS1
ORMDL1
HAAO
CEP126
CBWD5
CBWD3
ATF7IP2
ANGPTL5
UTP11
FHL3
RSRC1
PAX5
C12orf66
MED31
C17orf100
KANSL3
FER1L5
DBI
C2orf76
ALCAM
UNK
H3-3B
ZSCAN9
TMED4
MLLT1
DDX56
TOMM34
STK4
NOL10
RUNDC3A
MRPS35
LIMS1
TMEM129
TACC3
SLBP
CCDC83
FAAP20
RBM45
PDE11A
ZNF3
TRMT6
PAQR4
MEIS3
MCM8
KREMEN2
KAAG1
DCDC2
COPS6
APMAP
AGPS
TASOR
MRPL39
MEIS1
CBWD6
NDUFAF5
ESF1
MLN
RBL1
UFSP1
THAP7
SUGP2
PBLD
P2RX6
OXSM
NGLY1
MRPL16
HNRNPH3
GRM4
GOLGA8A
CDKN2AIPNL
ARMC6
ACHE
CEMIP
RAP1GAP
RANBP2
NBPF1
MRPL17
ZSWIM7
TTC19
TINF2
ROMO1
MRPL35
IMMT
GMPR2
EDRF1
CTNNA2
CRNKL1
CFAP61
OR2T1
MOB4
ACAD9
MTF2
H2BC14
H2AC14
STT3B
COQ8A
CD274
ATR
ZFP90
RAD9A
PPP1CA
ZNF219
TMEM253
OXA1L
ZNF514
ZNF2
TTI2
RNF103
POGK
NET1
VSIG2
ESAM
UBAP2L
C1orf43
SOGA3
NABP1
CCDC57
NME6
LACC1
CCDC122
LTV1
PIMREG
MYBPHL
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
AIPL1
LOC112694756
ESCO1
TMEM18
RAB3GAP2
ASCC3
ANAPC10
ABCE1
RBM12
CPNE1
MORN2
DHX57
TRDMT1
SIRT6
PLIN5
LRG1
LOC100287896
LIPT2
KHDRBS1
ELOVL1
CDC20
PIGF
CRIPT
RPIA
SYNGAP1
PSMD7
PHF1
JRKL
HPS5
GTF2H1
CUTA
COMMD1
CCT4
CCDC82
C16orf46
ARL17B
WDR43
SLC19A1
PAAF1
ITGB3BP
GMNN
EFCAB7
DHRS2
COA4
SULT4A1
SHQ1
SEC24A
RABL2B
PYGB
FBXO33
DHX35
CEBPZ
YDJC
XKR9
VTA1
TTLL4
TOP3B
TAB1
SOWAHC
SEPTIN10
SC5D
RPP38
NMBR
LACTB2
CTDP1
CCDC116
ACBD7
MRPL3
SCAPER
RAE1
MTRNR2L3
SPATA5
NUDT6
NDUFAF3
IMPDH2
HNF4G
DALRD3
ATG7
MXD1
ZSWIM1
TTC26
THOC3
SPATA25
SLC38A1
SLC23A3
RETREG2
NEURL2
METTL25
CTSA
CNPPD1
CCDC59
TMEM230
PCNA
CDS2
TSEN54
LLGL2
CASKIN2
PSMF1
HNRNPC
EEF1AKMT1
H1-2
DCPS
ZNF202
RPL15
NKIRAS1
MVD
HSD17B1
CTNNB1
COASY
CD320
C2orf73
ARPP19
TUBA1B
SERF1B
SERF1A
PIP4P1
PGP
OSGEP
E4F1
BRICD5
APEX1
PSME3
BECN1
ABCB6
VPS16
RPL5
RNMT
PCNX4
PCED1A
MIS18BP1
FAM210A
EPB41L4B
DCAF10
SRSF6
CRBN
THUMPD1
PCID2
MRPL27
MMAA
MARCHF8
LBP
GATAD2A
EME1
CUL4A
TSG101
SLC7A5
RNF146
PRPSAP1
PET117
NOP2
KAT14
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
ADSS1
MRPL21
IGHMBP2
UCKL1
STX18
SLC25A36
SEC61G
SDCBP
PPP1R11
POLR1H
ID1
GOLGA5
CWC25
ZNF425
ZNF398
STARD7
FBXO4
EEF1AKMT2
DDX19B
CPNE4
CHFR
ATXN2L
ANKEF1
ABRAXAS2
AARS1
DEFB132
TBC1D19
PTDSS1
MTERF3
SRP19
MARCHF7
FANCD2
COG7
WDR48
WDR41
STIP1
SCN11A
RRN3
RNPEPL1
PPT1
PLA2G10
NSRP1
NPM1
NHEJ1
MYBL2
KIZ
KIAA1958
DUSP28
DCUN1D5
C9orf147
ANKMY1
HINFP
HID1
CDR2L
TTPAL
TRA2B
TOMM5
SLC37A4
PPME1
GAS2L3
CD302
C2CD3
HHATL
PROCR
TEX14
RAD51C
PTPRA
PPP4R3B
PHOSPHO2-KLHL23
PHOSPHO2
NFIX
HSD17B12
EIF4G2
DHRS4
CHEK1
CCDC173
TMEM223
TMEM179B
RAMAC
MOCS2
BMS1
AHI1
ACAP2
MIA2
PIK3IP1
TEX46
TBC1D15
KDM1A
HNRNPF
FRG1
USP40
RPL37A
COCH
USP47
TP53I3
TNXB
TNPO1
TMEM101
SPAAR
SF3B6
REXO2
MATN1
HRCT1
FAM228B
DUS1L
DBNDD2
CENPA
C4B_2
C4B
TANK
THAP5
SPAG16
SNRPD1
RIF1
PSMD12
MLH1
MAIP1
GINS1
EPM2AIP1
DNAJB9
CCDC34
AKTIP
PRKDC
MCM4
ZER1
TTC30B
TBC1D32
SMIM26
SF3B5
NFU1
LSM12
G6PC3
DUS2
DPEP2NB
DDX28
CZIB
CEP192
H4C3
H1-6
COA7
ZCCHC9
TOB2
TMEM116
SLX4IP
SLC25A28
SF3A2
SEH1L
PLEKHJ1
MKKS
L3HYPDH
JKAMP
ICE2
FBXO48
ERP29
CIAO3
C6orf62
ASNS
APLF
C15orf61
ATP5F1E
NAT10
STAU1
SFI1
SERINC3
RPS7
RPLP1
PKIG
KLHL9
HUS1
EXD1
EIF4ENIF1
DDX27
CHP1
CAT
PHF3
SMPDL3A
NPIPB6
NCL
MGA
MAGOHB
GUSB
GPR6
FABP7
CFDP1
ZFHX2
ZBED8
WASHC4
TIMM23
THTPA
SGF29
PPM1D
MBIP
FAAH
XRN2
PEDS1-UBE2V1
PEDS1
C14orf93
SYCP2
PPP1R3D
PLAA
OSGEPL1
METAP2
IFT88
IFT74
FAM217B
FAM149B1
ECD
RBM7
C11orf71
TGFBRAP1
C2orf49
ZBED9
UBE2E3
THAP9
SEC31A
RALGAPA1
PRMT2
NCK1
CSE1L
LTN1
NOMO1
IMMP1L
ELP4
ZBED6CL
SLC25A13
PLS1
NDUFA12
LRRC61
KRR1
KNOP1
JAM3
GOSR1
DBP
CHORDC1
CDCA7
CA11
ATP5MC2
ACTR3C
DHDDS
ANKRD36B
MRPL19
CPPED1
TAMM41
IDH3B
FOXJ2
TUBGCP3
WDR89
GCA
GPN1
CCDC121
PRR3
GNL1
WDR35
TMEM262
TMA16
SCAND1
PUM2
MDP1
CHMP4A
ZNF451
TRAF6
SDHAF3
RIOK1
RAG1
PEBP1
FUT10
CAGE1
ANAPC1
ACYP2
VPS52
TTC17
TOP1
RPS18
PRPF38B
PPAT
PAICS
NAGK
FAN1
B3GALT4
PRRT2
PAGR1
MAZ
TRAPPC6B
PNN
TRAK2
TBRG4
STRADB
PABPN1
MTIF2
LYPLAL1
FEM1B
FAM162A
ERCC6
CCDC66
CCDC58
CBSL
CBS
BTF3
ARHGAP5
ZC3H6
DDX18
ZNF337
ZNF214
TUSC2