ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475368 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◢ SRX10475367: Hep G2

◣ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
MAMDC2
INSM2
IQSEC3
MTRNR2L1
FRG2C
LOC102724770
DGCR6
LIN28A
DUX4
WDR74
STX5
MTRNR2L2
MSH3
DHFR
FAM24A
NKX1-1
CELSR3
HTR5A
KCNH7
ARL4D
FRG2
MTRNR2L8
L1CAM
GLRA1
RAB37
RANBP3
ZC3H18
TMEM242
CCDC200
CHGB
MUC3A
EPHA10
SMIM17
CPLX2
SNAP25
BARHL1
AFAP1
EAPP
LEMD3
ZNF285
DLGAP3
SLC7A6OS
PRMT7
PIK3R3
RTBDN
MAST1
KDM3A
ZNF23
GDAP1L1
KATNA1
MAPK8IP2
RGS19
OPRL1
LKAAEAR1
ODC1
KCNK12
SLC39A3
TRIM44
HDAC2
GCFC2
SAYSD1
RNF130
SLC12A5
CADM3
RFC1
NOC3L
E2F6
AATF
BPIFA3
SNRPB2
H4C12
H4C11
H2BC15
H2AC15
CTDSPL
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SIGLEC10
COL23A1
MMP24
SST
CDIP1
EVI5
VRK2
DEFB132
STK25
PTPRS
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SNX16
ICMT
HES3
MYT1
MTHFD2
MED31
C17orf100
N6AMT1
UNC80
ZNF229
CDK5RAP3
HBQ1
HBA2
HBA1
AIP
RNASEH2C
KAT5
SPOP
NDUFS3
KBTBD4
FAM180B
LHFPL5
CLPS
CHRM4
DHDDS
WDR36
TMEM129
TACC3
SLBP
KLF11
CCDC92B
RBM28
PMVK
ABCA3
FAM118A
TMEM106B
CEMIP
IPMK
CISD1
PPFIA3
C19orf73
MSL2
ANK1
DIABLO
FAM227B
DTWD1
SCGN
NME6
CEP295
RIPPLY2
CYB5R4
STAT3
PPP2R2C
MTF2
LARP1
NDUFAF5
ESF1
TBC1D13
MARCHF4
CPQ
ANKRD36
WASHC1
FMNL3
RNF103-CHMP3
RMND5A
LINGO1
HMGA1
HECTD1
TK2
CKLF-CMTM1
CKLF
UTP11
FHL3
VSIG2
ESAM
MLN
MLH3
TOMM34
STK4
DHRS4L2
MLXIP
LRIF1
TCFL5
ANKRD36C
TRIP4
PCLAF
LACC1
CCDC122
VWC2L
MRPL44
UTS2R
VPS29
RAD9B
TUBA1B
PNPT1
NSUN5
SLC25A21
CERS6
LTV1
MED23
STMN3
RTEL1
OGFOD3
HEXD
CCDC83
TMEM230
PCNA
CDS2
XRN2
THUMPD2
VGF
ZFYVE27
EFCAB13
USP40
USP14
LCLAT1
FANCL
DLL3
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
GPR158
TIGD1
EIF4E2
RAP1GAP
UNK
H3-3B
MRPL3
HINFP
PRRT2
PAGR1
MAZ
PIGF
CRIPT
TRMT11
UBE2Q1
CHRNB2
TBCB
RNASEH1
POLR2I
OVOL3
HES6
AP3S1
STX16
TASOR
H2BC14
H2AC14
SCFD1
TSEN54
LLGL2
CASKIN2
PLEKHM3
SNRPB
HEATR5A
RBM12
CPNE1
PEDS1-UBE2V1
PEDS1
HPCA
CDK5RAP1
CNTRL
C5
ANKRD36B
SLC25A10
MRPL12
TASOR2
PSMA1
PDE3B
OR2T1
TBC1D19
HHATL
PHF3
SNTG1
NPPB
NTSR2
LPIN1
MRPL39
MFF
C15orf61
NBEAL1
SRSF6
RPS6
TPP1
TAF10
RRP8
PDE6D
ILK
COPS7B
CC2D1A
C19orf57
OGDHL
TM9SF1
IPO4
MIA2
RPL37A
MRPL19
RRP1B
HSF2BP
PMS2
AIMP2
METTL15
KIF18A
RPL31
TUBGCP3
PALB2
DCTN5
HDAC4
CNPY3
DHX40
USP37
CNOT9
LAMTOR5
RBL1
PTDSS1
MTERF3
GEMIN2
SEC23A
PDE7A
SRP19
CRH
DTD2
MEIG1
DCLRE1C
ZNF780B
EPM2A
ZNF843
TTI1
RPRD1B
POLR2J3
GRM1
RAD50
SMAD2
FAF1
DCP1B
CDKN2C
PGRMC2
RANBP2
PIK3IP1
PRKDC
MCM4
STAT1
TAF12
NBPF1
MRPL17
ZC3H15
USP30
SVOP
CPPED1
COA1
DDX1
ATP5F1E
POLR3E
KIF27
POLE4
MARCHF7
NADK2
AHR
DPY19L4
TMEM186
PMM2
ZNFX1
SLC39A1
CRTC2
CREB3L4
C5orf51
EBAG9
TDRKH
NOP56
EIPR1
SLC31A1
FKBP15
ISM1
LOC112694756
DHRS4L1
C14orf93
SLC36A4
FAM98B
FUS
SCLT1
RIOK2
C4orf33
THUMPD3
NAT10
CFDP1
PCF11
C5orf24
SHOX2
HBS1L
TRIL
CMC1
ASS1
ASNSD1
ASDURF
FAAP20
SCAPER
MRPL21
IGHMBP2
PROCR
NAV2
C7orf25
H1-2
COCH
WDR89
TPR
ODR4
ZFP90
EIF2S2
CMTR2
C10orf88
MORN2
DHX57
RPIA
ARL14EP
PDHB
WWP2
NOB1
SPAG4
H4C14
H3C15
H3C14
H2AC19
H2AC18
EMC2
HEXA
RSPH3
RBM7
C11orf71
PSMD14
ZNF248
UBE2D3
NOMO2
METTL3
CISD2
TRDMT1
TMEM268
GALK2
FN1
CEP162
SULT6B1
MXD1
H4C2
H3C2
H2AC4
NUP54
BUD13
NXF1
LRP2BP
ANKRD37
GCA
PSMD3
LDHA
ZC3H6
NOL7
NOL10
RAD9A
PPP1CA
DCPS
PSME3
BECN1
ASCC1
ANAPC16
ZNF280D
MSRB3
HIRIP3
FBXO8
FAM187A
EFTUD2
CEP44
CCDC103
RAE1
MTRNR2L3
CRBN
FANCD2
H4C3
H1-6
LTN1
GPN1
CCDC121
STT3B
COG7
NOMO1
POLG2
DDX5
CEP95
RBM45
PDE11A
PBX3
FAM98A
MMADHC
TMX3
CCDC102B
DNAJC10
COA7
TBC1D9
DDX18
CKAP5
NCOA3
ZNF443
PRR3
GNL1
TRAPPC6B
PNN
NR1H3
H2AZ2
ACP2
HID1
CDR2L
TAMM41
MTMR2
OXA1L
TANK
UBA5
MTX2
ACAD11
ATOH7
ABCB6
PDRG1
UBR2
MRM3
GLOD4
RILPL1
ESCO1
TGFBRAP1
C2orf49
RPS27A
CLHC1
TOB1
CCDC90B
CHID1
AP2A2
IMMP1L
ELP4
YAE1
KCNB1
DNTTIP2
TMEM68
TGS1
RPS3A
DNAJC6
CCNL1
ENOSF1
ZPBP2
IKZF3
SSTR5
SRRM3
PTPRN
WTAP
SOD2
FN3K
GTF3C3
C2orf66
EIF3B
CHGA
EXOSC6
GJA10
CA4
LMCD1
NRSN1
NOMO3
ABCC6
SCRT2
NEUROD1
LTB4R2
LTB4R
CIDEB
CDK5R2
TGM1
RABGGTA
LDAH
SPNS2
PPP1R3C
SP5
PTMA
AKAP10
TENT4A
SF3A3
ACTL6B
AAR2
RBM39
PGBD5
SLC3A2
UNG
TCAIM
SLC7A7
MRPL52
ALKBH2
PPY
FAM177A1
LRRC59
AARS2
CYP21A2
ZNF286A
TSSK4
LUC7L
GID8
GET4
FAM234A
DIDO1
SIT1
RNF187
CCDC107
ARHGEF39
NR1D1
NANP
RMND1
ARMT1
TMEM181
SCAMP5
DNAJC11
ENO1
PTP4A2
INTS12
GSTCD
SCAF11
C6orf136
SOS1
SMC3
MAP2K2
LRP6
SUGCT
MPLKIP
IFNAR1
PCDH8
DCP1A
NUP62
IL4I1
ATF5
SPTSSA
RIPK3
NAA20
ADCY4
EIF4A3
CTF1
BCL7C
TSGA10
THNSL1
MAPK8
SCGB1D2
PC
NHLRC1
C1QL2
CTR9
ZCCHC7
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
FGFBP3
BHLHE40
TRIM67
SLC9A1
RRP15
PEX3
NID1
GRIA2
ARL6IP1
ADAT2
MTERF4
DOCK6
QTRT1
IARS1
CACNA1B
ZNF501
HS6ST1
NUP160
CDC16
ELOVL3
TOLLIP
RXRA
PIKFYVE
PDE4C
NUBP1
NREP
GOPC
CABP7
ZFP1
WDR31
SRP54
CUL5
BSPRY
AP5S1
URGCP
UBE2D4
OSBPL8
L2HGDH
HELB
GMCL1
DMAC2L
AKAP11
TRIM8
SPHK1
NPIPA3
NPIPA2
PTPRH
MAT2A
MAP2K3
CLVS1
RETSAT
PARD6A
MIPOL1
LMLN2
G2E3
FTCDNL1
ELMOD3
CHD9
C16orf86
C14orf119
ACIN1
ACD
ZKSCAN8
PMS1
ORMDL1
HAAO
CEP126
CBWD5
CBWD3
ATF7IP2
ANGPTL5
RSRC1
PAX5
C12orf66
KANSL3
FER1L5
DBI
C2orf76
ALCAM
ZSCAN9
TMED4
MLLT1
DDX56
RUNDC3A
MRPS35
LIMS1
ZNF3
TRMT6
PAQR4
MEIS3
MCM8
KREMEN2
KAAG1
DCDC2
COPS6
APMAP
AGPS
MEIS1
CBWD6
UFSP1
THAP7
SUGP2
PBLD
P2RX6
OXSM
NGLY1
MRPL16
HNRNPH3
GRM4
GOLGA8A
CDKN2AIPNL
ARMC6
ACHE
ZSWIM7
TTC19
TINF2
ROMO1
MRPL35
IMMT
GMPR2
EDRF1
CTNNA2
CRNKL1
CFAP61
MOB4
ACAD9
COQ8A
CD274
ATR
ZNF219
TMEM253
ZNF514
ZNF2
TTI2
RNF103
POGK
NET1
UBAP2L
C1orf43
SOGA3
NABP1
CCDC57
PIMREG
MYBPHL
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
AIPL1
TMEM18
RAB3GAP2
ASCC3
ANAPC10
ABCE1
SIRT6
PLIN5
LRG1
LOC100287896
LIPT2
KHDRBS1
ELOVL1
CDC20
SYNGAP1
PSMD7
PHF1
JRKL
HPS5
GTF2H1
CUTA
COMMD1
CCT4
CCDC82
C16orf46
ARL17B
WDR43
SLC19A1
PAAF1
ITGB3BP
GMNN
EFCAB7
DHRS2
COA4
SULT4A1
SHQ1
SEC24A
RABL2B
PYGB
FBXO33
DHX35
CEBPZ
YDJC
XKR9
VTA1
TTLL4
TOP3B
TAB1
SOWAHC
SEPTIN10
SC5D
RPP38
NMBR
LACTB2
CTDP1
CCDC116
ACBD7
SPATA5
NUDT6
NDUFAF3
IMPDH2
HNF4G
DALRD3
ATG7
ZSWIM1
TTC26
THOC3
SPATA25
SLC38A1
SLC23A3
RETREG2
NEURL2
METTL25
CTSA
CNPPD1
CCDC59
PSMF1
HNRNPC
EEF1AKMT1
ZNF202
RPL15
NKIRAS1
MVD
HSD17B1
CTNNB1
COASY
CD320
C2orf73
ARPP19
SERF1B
SERF1A
PIP4P1
PGP
OSGEP
E4F1
BRICD5
APEX1
VPS16
RPL5
RNMT
PCNX4
PCED1A
MIS18BP1
FAM210A
EPB41L4B
DCAF10
THUMPD1
PCID2
MRPL27
MMAA
MARCHF8
LBP
GATAD2A
EME1
CUL4A
TSG101
SLC7A5
RNF146
PRPSAP1
PET117
NOP2
KAT14
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
ADSS1
UCKL1
STX18
SLC25A36
SEC61G
SDCBP
PPP1R11
POLR1H
ID1
GOLGA5
CWC25
ZNF425
ZNF398
STARD7
FBXO4
EEF1AKMT2
DDX19B
CPNE4
CHFR
ATXN2L
ANKEF1
ABRAXAS2
AARS1
WDR48
WDR41
STIP1
SCN11A
RRN3
RNPEPL1
PPT1
PLA2G10
NSRP1
NPM1
NHEJ1
MYBL2
KIZ
KIAA1958
DUSP28
DCUN1D5
C9orf147
ANKMY1
TTPAL
TRA2B
TOMM5
SLC37A4
PPME1
GAS2L3
CD302
C2CD3
TEX14
RAD51C
PTPRA
PPP4R3B
PHOSPHO2-KLHL23
PHOSPHO2
NFIX
HSD17B12
EIF4G2
DHRS4
CHEK1
CCDC173
TMEM223
TMEM179B
RAMAC
MOCS2
BMS1
AHI1
ACAP2
TEX46
TBC1D15
KDM1A
HNRNPF
FRG1
USP47
TP53I3
TNXB