ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SMAD9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◣ SMAD9: Average

◢ SRX10475367: Hep G2

◢ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
INSM2
MTRNR2L1
LIN28A
FRG2C
NKX1-1
HTR5A
FAM24A
MTRNR2L2
MSH3
DHFR
DUX4
WDR74
CELSR3
KCNH7
RAB37
CPLX2
FRG2
RANBP3
GLRA1
CHGB
MTRNR2L8
L1CAM
SNAP25
BARHL1
CCDC200
DLGAP3
EPHA10
MUC3A
SMIM17
LEMD3
RTBDN
SLC7A6OS
PRMT7
KDM3A
MAPK8IP2
SST
PIK3R3
GDAP1L1
GCFC2
CDIP1
LHFPL5
SIGLEC10
RNF130
SLC12A5
PTPRS
HES3
N6AMT1
COL23A1
CTDSPL
TRIM44
AATF
CCDC92B
H4C12
EVI5
KATNA1
MARCHF4
HBQ1
HBA1
SLC39A3
UNC80
CPQ
RFC1
CYB5R4
CHRM4
KLF11
STK25
OPRL1
LKAAEAR1
HDAC2
HES6
VGF
NOC3L
USP14
CEP295
SAYSD1
ODC1
NPPB
IPMK
CISD1
NTSR2
RNF103-CHMP3
RMND5A
MYT1
ANKRD36
E2F6
SNRPB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NSUN5
STX16
POLR2J3
CERS6
SLC25A10
PMS2
AIMP2
PMVK
KAT5
AIP
ANK1
TASOR2
ZFYVE27
VRK2
METTL15
KIF18A
WDR36
SCGN
OGDHL
RBM28
SPOP
EPM2A
DIABLO
GRM1
TCFL5
STMN3
RTEL1
HECTD1
FMNL3
HDAC4
DDX1
STAT3
DNAJC6
MED31
C17orf100
TIGD1
EIF4E2
TMEM106B
RAD50
CNPY3
ANKRD36C
HPCA
DPY19L4
ABCA3
SLC25A21
MSL2
LCLAT1
SLBP
UBE2Q1
CCNL1
MFF
FANCL
DHRS4L2
CNTRL
C5
VPS29
RAD9B
PLEKHM3
ENOSF1
ZPBP2
IKZF3
EFCAB13
CEMIP
TK2
CKLF-CMTM1
CKLF
TRIP4
TM9SF1
PSMA1
PDE3B
DHX40
DTD2
SNRPB
THUMPD2
USP30
SVOP
MTF2
OGFOD3
NDUFAF5
HEXD
ESF1
SSTR5
UTP11
NME6
USP37
SCFD1
MRPL44
CNOT9
TOMM34
CMTR2
HEATR5A
THUMPD3
DCLRE1C
ESAM
DHDDS
SRRM3
ZMYND10
NPRL2
CYB561D2
RPL31
EBAG9
CCDC83
TMEM186
PMM2
LACC1
CCDC122
H3-3B
CDK5RAP1
PTPRN
LTV1
POLE4
KCNK12
TASOR
PGRMC2
TUBA1B
H4C11
PCNA
MRPL39
LAMTOR5
WTAP
SOD2
FN3K
PIGF
OR2T1
CRIPT
GTF3C3
MRPL3
SPAG4
RBM12
CPNE1
RBL1
EIF3B
LDHA
C7orf25
TSEN54
NOP56
CASKIN2
FAM98B
RANBP2
C10orf88
USP40
NBPF1
MRPL17
HINFP
FUS
CHGA
EXOSC6
GJA10
XRN2
HBS1L
LMCD1
SRSF6
RSPH3
NOL7
TBC1D19
HHATL
LRP2BP
H4C14
FAAP20
ANKRD37
TMX3
CCDC102B
NRSN1
PTDSS1
MTERF3
MMP24
MIA2
LOC112694756
SRP19
RPL37A
PRRT2
PEDS1-UBE2V1
PEDS1
MAZ
CHRNB2
PHF3
ABCC6
C15orf61
SCRT2
MTMR2
ANKRD36B
NOL10
NEUROD1
DNAJC10
PIK3IP1
MARCHF7
MRPL19
MORN2
DHX57
AP3S1
SCAPER
RPIA
LTB4R
CIDEB
PRKDC
MCM4
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TUBGCP3
TOB1
CDK5R2
RBM45
PDE11A
TRDMT1
SNX16
RAD9A
H1-2
STT3B
RABGGTA
MTHFD2
LDAH
ATP5F1E
MRPL21
IGHMBP2
RPS6
CPPED1
PROCR
PPP1R3C
MXD1
CDK5RAP3
SP5
PTMA
RAE1
NAT10
COCH
C14orf93
AKAP10
OXA1L
NDUFS3
KBTBD4
DCPS
TENT4A
CFDP1
PSME3
SF3A3
ACTL6B
AAR2
RBM39
PGBD5
GEMIN2
SLC3A2
CRBN
UNG
TCAIM
SLC7A7
ALKBH2
PPY
FAM177A1
POLR3E
LRRC59
FANCD2
AARS2
WDR89
CYP21A2
COG7
ZNF286A
ESCO1
RBM7
C11orf71
LUC7L
GID8
GET4
DIDO1
RNF187
H4C3
H1-6
CCDC107
NR1D1
NANP
FAM227B
DTWD1
ARL14EP
ABCB6
RMND1
ARMT1
TMEM181
SCAMP5
GCA
DNAJC11
ENO1
PTP4A2
INTS12
GSTCD
SCAF11
LARP1
GPN1
CCDC121
C6orf136
ZC3H6
TBC1D13
TANK
SOS1
SMC3
MAP2K2
LRP6
IPO4
SUGCT
MPLKIP
IFNAR1
PCDH8
DCP1A
NUP62
LINGO1
IL4I1
HMGA1
ATF5
SPTSSA
NAA20
ADCY4
EIF4A3
CTF1
BCL7C
TSGA10
THNSL1
PRR3
NOB1
MAPK8
GNL1
TAMM41
SCGB1D2
PC
NHLRC1
H4C2
H3C2
MLH3
DDX18
CTR9
TRAPPC6B
PNN
ZCCHC7
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
MLXIP
LRIF1
NCOA3
CKAP5
PBX3
VWC2L
TGFBRAP1
FGFBP3
UTS2R
TRIM67
SLC9A1
RRP15
PEX3
NID1
GRIA2
ARL6IP1
ADAT2
MTERF4
DOCK6
PNPT1
IARS1
ZNF501
PSMD14
NUP160
MED23
IMMP1L
ELP4
CDC16
ELOVL3
TOLLIP
RXRA
PIKFYVE
PDE4C
NUBP1
NREP
GOPC
CABP7
ZFP1
WDR31
SRP54
CUL5
URGCP
UBE2D4
OSBPL8
L2HGDH
HELB
GMCL1
DMAC2L
DLL3
AKAP11
TRIM8
SPHK1
GPR158
MAT2A
CLVS1
RETSAT
PARD6A
MIPOL1
G2E3
FTCDNL1
ELMOD3
CHD9
C14orf119
ACIN1
ACD
ZKSCAN8
TRMT11
PMS1
ORMDL1
HAAO
CEP126
CBWD5
CBWD3
ATF7IP2
ANGPTL5
SHOX2
RSRC1
C12orf66
TBCB
RNASEH1
POLR2I
OVOL3
KANSL3
FER1L5
DBI
C2orf76
ALCAM
ZSCAN9
MLLT1
DDX56
RUNDC3A
MRPS35
LIMS1
TRMT6
PAQR4
MCM8
KREMEN2
KAAG1
DCDC2
COPS6
APMAP
AGPS
MEIS1
CBWD6
UFSP1
SUGP2
PBLD
OXSM
NGLY1
MRPL16
HNRNPH3
GRM4
GOLGA8A
CDKN2AIPNL
ARMC6
ACHE
ZSWIM7
TTC19
TINF2
ROMO1
MRPL35
IMMT
EDRF1
CTNNA2
CRNKL1
CFAP61
SNTG1
MOB4
ACAD9
COQ8A
CD274
ATR
ZNF219
RPS27A
NBEAL1
CLHC1
ZNF2
TTI2
TAF10
RNF103
POGK
PDE6D
NET1
COPS7B
CC2D1A
C19orf57
UBAP2L
C1orf43
SOGA3
RRP1B
NABP1
HSF2BP
PIMREG
PALB2
MPHOSPH10
MCEE
HNRNPH1
DTX2
DCTN5
BRMS1L
TMEM18
RAB3GAP2
ASCC3
ANAPC10
ABCE1
SEC23A
PLIN5
PDE7A
LOC100287896
LIPT2
KHDRBS1
ELOVL1
PSMD7
PHF1
JRKL
HPS5
GTF2H1
CRH
COMMD1
CCT4
CCDC82
C16orf46
ZNF780B
WDR43
PAAF1
ITGB3BP
GMNN
EFCAB7
DHRS2
COA4
ZNF843
TTI1
SHQ1
SEC24A
RPRD1B
RABL2B
PYGB
FBXO33
DHX35
CEBPZ
YDJC
XKR9
VTA1
TTLL4
TOP3B
TAB1
SOWAHC
SMAD2
SEPTIN10
SC5D
RPP38
NMBR
LACTB2
CTDP1
CCDC116
SPATA5
NUDT6
IMPDH2
HNF4G
DCP1B
CDKN2C
ATG7
TTC26
THOC3
SPATA25
SLC38A1
RETREG2
NEURL2
METTL25
CTSA
CNPPD1
CCDC59
ZC3H15
PSMF1
HNRNPC
EEF1AKMT1
ZNF202
RPL15
NKIRAS1
MVD
HSD17B1
CTNNB1
COA1
CD320
C2orf73
ARPP19
SERF1B
SERF1A
PGP
OSGEP
KIF27
BRICD5
APEX1
VPS16
RPL5
RNMT
PCNX4
PCED1A
NADK2
MIS18BP1
FAM210A
EPB41L4B
DCAF10
AHR
ZNFX1
THUMPD1
SLC39A1
PCID2
MRPL27
MMAA
MARCHF8
LBP
GATAD2A
EME1
CUL4A
CREB3L4
C5orf51
TSG101
TDRKH
SLC7A5
RNF146
PRPSAP1
PET117
NOP2
KAT14
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
UCKL1
STX18
SLC25A36
SEC61G
SDCBP
POLR1H
GOLGA5
CWC25
ZNF425
ZNF398
STARD7
SLC31A1
FKBP15
FBXO4
EEF1AKMT2
DDX19B
CPNE4
CHFR
ATXN2L
ANKEF1
WDR48
WDR41
STIP1
SCN11A
RRN3
PPT1
NSRP1
NPM1
NHEJ1
KIZ
KIAA1958
ISM1
EAPP
DUSP28
DCUN1D5
C9orf147
ANKMY1
TTPAL
TRA2B
TOMM5
SLC37A4
PPME1
GAS2L3
DHRS4L1
CD302
C2CD3
TEX14
SLC36A4
RAD51C
PTPRA
PPP4R3B
PHOSPHO2-KLHL23
PHOSPHO2
NFIX
HSD17B12
EIF4G2
DHRS4
CHEK1
CCDC173
TMEM223
TMEM179B
RAMAC
MOCS2
BMS1
AHI1
ACAP2
TEX46
TBC1D15
SCLT1
RIOK2
KDM1A
HNRNPF
FRG1
C4orf33
USP47
TNXB
TNPO1
TMEM101
SPAAR
SF3B6
REXO2
PCF11
MATN1
FAM228B
DUS1L
CENPA
C5orf24
C4B_2
C4B
TRIL
THAP5
SPAG16
SNRPD1
RIF1
PSMD12
MLH1
MAIP1
GINS1
EPM2AIP1
DNAJB9
CMC1
CCDC34
ASNSD1
ASDURF
AKTIP
ZER1
TTC30B
TBC1D32
SMIM26
SF3B5
NFU1
NAV2
LSM12
G6PC3
DUS2
DDX28
CZIB
CEP192
ZCCHC9
TOB2
TMEM116
SLX4IP
SLC25A28
SF3A2
SEH1L
PLEKHJ1
MKKS
L3HYPDH
JKAMP
ICE2
FBXO48
ERP29
CIAO3
C6orf62
ASNS
APLF
TPR
STAU1
SFI1
SERINC3
RPS7
RPLP1
ODR4
KLHL9
HUS1
EXD1
DDX27
CHP1
CAT
SMPDL3A
NPIPB6
NCL
MGA
MAGOHB
GUSB
GPR6
EIF2S2
ZFHX2
ZBED8
WASHC4
TIMM23
THTPA
SGF29
PPM1D
PDHB
MBIP
FAAH
PPP1R3D
PLAA
OSGEPL1
METAP2
IFT88
IFT74
FAM217B
FAM149B1
ECD
ZBED9
UBE2E3
SEC31A
RALGAPA1
PRMT2
NCK1
EMC2
CSE1L
SLC25A13
PLS1
NDUFA12
LRRC61
KRR1
KNOP1
JAM3
HEXA
GOSR1
DBP
CHORDC1
CDCA7
ATP5MC2
ACTR3C
ZNF248
UBE2D3
METTL3
IDH3B
CISD2
WDR35
TMEM268
TMA16
SCAND1
PUM2
MDP1
GALK2
FN1
CHMP4A
CEP162
ZNF451
TRAF6
SULT6B1
SDHAF3
RIOK1
RAG1
PEBP1
FUT10
CAGE1
ANAPC1
ACYP2
VPS52
TTC17
TOP1
RPS18
PRPF38B
PPAT
PAICS
NUP54
NAGK
H2AC4
FAN1
BUD13
B3GALT4
TRAK2
TMEM230
TBRG4
STRADB
STK4
PABPN1
NXF1
MTIF2
LYPLAL1
FEM1B
FAM162A
ERCC6
CCDC66
CCDC58
CBS
BTF3
ARHGAP5
ZNF337
ZNF214
TEFM
SPON2
SMG1
RPS3
RCCD1
RASSF1
PSMD3
NLRP14
H2AX
ERCC3
ATXN7L3B
ZNF706
UGGT2
TTC9C
SRSF2
SNAI1
SKA3
RPUSD4
RPL10A
POLR1B
MRPL57