ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477188 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◣ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
DEPP1
NRL
DCAF11
HTR5A
MTRNR2L2
CELSR3
L1CAM
CPLX2
RAB37
GLRA1
SH2D3C
TBC1D10B
MYLPF
WDR74
MTRNR2L8
MAPK8IP2
IL11RA
RANBP3
OTX1
CHGB
BARHL1
EPHA10
SCRT1
OPA3
RIN2
SLC45A4
LHFPL5
HPCA
CCDC92B
SRRM3
SNAP25
KCNH6
MTRNR2L9
VGF
MMP24
INTS12
GSTCD
HES3
ITGB1BP1
CPSF3
SLC7A6OS
PRMT7
GRM1
STMN3
UNC80
PCNA
KCNK12
CCDC200
METTL9
SST
PEX3
ADAT2
NDUFAF5
ESF1
SCRT2
GDAP1L1
PLEKHM3
ZNF670
CYB5R4
CHRNB2
GTF3C3
PTPRN
CDK5RAP1
NTSR2
DNAJC6
ABCC6
STX18
STX16
DUS1L
DCP1A
RANBP2
KLF11
PSMF1
SLC39A3
TMEM181
OGDHL
IPO4
PPP3CA
MOB4
NPPB
DDX1
TRMT61B
H4C12
SP2
COPS8
TMEM242
CCNC
PIH1D1
MRPL44
NOL7
MRPL30
MITD1
MTF2
DPY19L4
POLR3E
CWC25
COPS7B
EXT1
PTGDR2
USPL1
HMGB1
TTI2
ANK1
PRR13
MARCHF4
SF3A3
MED23
SLC35A3
TMEM186
PMM2
NME1
FAM227B
DTWD1
SVOP
COMMD1
CCT4
STK4
CHRM4
NSFL1C
PRMT5
GPR158
SCFD1
TACO1
IRF9
PHF3
PHF1
RPS7
TMEM41A
RAD54L2
SNAP47
JMJD4
LRRC59
MRPL58
ACTL6B
VNN3
TRIP4
RBM28
TIGD1
EIF4E2
AAR2
WDR36
SH3BGRL2
MRPL40
HIRA
LRRC37A3
KANSL3
HBQ1
SNRPB2
SYP
MRPS31
RABGGTA
USP14
SLC12A5
FOXJ3
NDUFS3
KBTBD4
CPNE4
CCDC88A
WTAP
SOD2
PTPRS
SLC30A6
GCFC2
HSPE1-MOB4
HSPE1
HSPD1
PTP4A2
HDAC4
E2F3
MAP1LC3B
FBXO31
PMS2
AIMP2
TEFM
HS3ST2
KRCC1
SEZ6
SLC25A21
EXOSC6
LEMD3
ANKRD36
ZNF292
TSPAN10
NPLOC4
CCNL1
SOS1
HEATR5A
DRG2
NUF2
EXOC2
PPP4R3B
CALM2
PET117
KAT14
TM9SF1
XRN2
TSEN54
CASKIN2
DTD2
PGRMC2
SAR1B
MTIF2
RBL1
NUDT1
MRM2
MTERF4
SNRPC
RGMB
CDIP1
KDM3A
UBE2Q1
PREPL
CAMKMT
PHF14
SLC44A1
MRPS23
RTF2
NUP153
UCHL5
RO60
MRPL3
TBCD
MRPL53
THUMPD1
BICDL1
AIP
METTL25
CCDC59
PYGB
EAPP
FAN1
HDAC2
PKP4
TBC1D19
TASOR2
HMGA1
SCGN
MMAA
VWC2L
CNPY3
GUSB
GOT2
STK25
TMEM222
ZBTB45
CDKN2AIPNL
RPL27
ZNFX1
TSN
DUS2
DDX28
KIAA1586
SSBP1
THOC3
FRA10AC1
SF3B6
FAM228B
STRADA
UBAP2
MTHFD2
NXF1
XYLB
HAAO
ANAPC11
ALYREF
SAAL1
HDDC2
BLOC1S5
SEZ6L2
ASPHD1
POLR2J3
RBM12
CPNE1
WDR31
CALM1
RBM39
SEC23A
SMG8
MRM3
GLOD4
PGBD5
TANK
RNF130
RMND1
ARMT1
MAP2K2
PPP1R3C
NCOA5
OPA1
TRMT2A
RANBP1
RSPH3
MDP1
PPM1H
ZNF165
DHDDS
NOC4L
NFKBIA
DDX51
NOP9
DHRS1
ABCA3
RRP1B
HSF2BP
TOMM22
NDUFA12
USP30
SEC14L1
TRMT6
MCM8
FAM98B
POLR1H
HECTD1
NEURL2
CTSA
CSTF1
AURKA
KIZ
SNX17
EIF2B4
RAB5IF
TRMT44
ACOX3
CPNE9
PIGU
LDAH
MIA2
ENOSF1
CLK1
PTPN4
PPIL4
GRIA2
DCAF10
ZGPAT
ARFRP1
RFT1
GJA10
DNAJC24
DCDC1
LAMP1
PSMD3
H2BC17
H2AC17
CBWD5
TMEM14B
CBWD3
TOX4
RAB2B
FGA
CBWD6
BCL2L11
PDE4C
DMAP1
TMEM179
BIRC2
APOB
AATF
USP42
RBM45
CETN3
CLEC16A
IKZF3
PDE1C
FANCL
KCTD5
MAGOHB
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TUBGCP3
CTNNB1
SLC9A1
RUSF1
ETFA
STAT3
TMEM230
NDUFC2-KCTD14
NDUFC2
PMVK
LEAP2
DDX56
WASHC2C
ATIC
USP40
GOSR2
ACAD9
DNAJC25-GNG10
DNAJC25
FUS
TOP3B
SNX18
SNF8
WASHC1
PDXDC1
LYSMD3
AKAIN1
IDH3B
LOC112694756
TMEM248
H1-2
SCAMP1
GEMIN7
MNAT1
CHD9
ZC3H6
THNSL1
ATF2
AP3S1
RFC1
TMEM106B
DHRS2
POLR3G
MBLAC2
COPS7A
KNOP1
INSIG2
TTC30A
FAM163B
POLDIP3
SRP54
PCK2
TTC4
MDM2
NUP54
NDUFS7
PUM2
MTHFD1L
ZNF425
ZNF398
SEC24A
SLC39A13
HPCAL1
NHLRC1
SNRPB
BRMS1L
GZF1
MRPL39
NET1
CRH
RUVBL1
EEFSEC
TMEM101
STOML2
ACY1
NCL
TTC26
SREK1
ZNF843
WASL
CHEK1
BMS1
RPS15A
SMG1
BUD13
BCL6
KRR1
ASF1A
SULT1A1
ABHD12
H4C15
H4C14
SUMF1
RPS15
CLVS1
GORASP2
COQ9
CIAPIN1
SYN1
NOL10
SLC35B2
KATNA1
LONP2
ABCC11
SPOP
FITM2
DNMT3A
G2E3
ETV4
NOP56
CLUAP1
NOC3L
SRSF2
MFSD11
MRPL21
IGHMBP2
FAM177A1
EFCAB13
BIRC5
TOB2
BIRC6
YTHDF1
ARMH3
MRPS25
RPS6
THAP4
ATG4B
NAT10
DCP1B
NFAT5
EIF2D
NID1
TDP2
ACOT13
ENTPD6
HAL
PIGO
ZSCAN9
GEMIN2
FAM207A
E2F6
AARS2
ERLEC1
ASB3
EEF1AKMT2
NOL11
C16orf72
LGR5
EEF2K
TSGA10
EIF2B5
TBPL1
VTA1
NMBR
TVP23B
TRDMT1
ADGRG6
CBS
CPPED1
PIK3R3
TBC1D13
ISOC1
CTBS
NOCT
CD164
ESYT3
RBPJ
WDR45B
TTPAL
TMEM39A
RNF149
HUS1
ZSCAN25
CYCS
H1-4
GINS1
ZBTB4
POLR2A
MC1R
NRSN1
MPHOSPH6
PLA2G15
TOB1
CDCA7
TTLL4
TAMM41
ATF7IP2
KIF16B
SARAF
NSRP1
RPTOR
EFTUD2
CCDC103
SCG3
UNC50
COA5
TRIM44
PRORP
PPP2R3C
MAP3K4
SIRT4
EDC4
PPP5C
AHCY
CNN3
CRLF3
HEXA
TAB1
C2orf42
ATG16L1
HINT3
LTV1
PRDX1
DDX18
RPL31
EPHX2
RPL12
LRSAM1
CRLS1
MMADHC
TGOLN2
KHK
RABL2B
APOL2
AKAP10
NGDN
ARFGAP3
GFM2
UTP3
TRIM33
LAP3
H4C11
TRIM67
C19orf53
SLC25A10
ARL6IP1
CCDC107
WFDC3
DNTTIP1
ATP5MC2
CLN5
ERCC5
HADHB
HADHA
MED15
SLC51B
CCNJ
ATP6V0A1
SCAMP5
OPRM1
ALG10B
MRRF
ZNF212
CEP350
COX20
PRKDC
MCM4
GTF2H2C_2
GTF2H2C
C10orf88
GMCL1
VARS2
KIAA1841
ARL14EP
PDHX
APIP
GSPT1
ZNF473
VRK3
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TRIAP1
ATXN2L
THOC1
POLR3B
ATXN1L
WDR33
CIAO3
SUGP2
NKD1
LYZ
GCLC
DNAJC2
ARMC6
CPSF1
SIK2
ZNF460
IMPDH2
ENO1
NBPF1
TMEM169
PECR
P4HA1
TSFM
WASHC5
NSMCE2
ELK4
APOA1
RTEL1
SRFBP1
KMT2D
CD320
IPO13
FAHD2A
DCAF8
TPH2
NUS1
WDR35
PRRC2B
ITPR1
PIGF
CRIPT
AIFM2
DPH7
EVI5
PTDSS1
MTERF3
RRN3
CCT2
POLR3D
COX16
TIMM22
RFXANK
BORCS8-MEF2B
BORCS8
ZNF354B
WASHC2A
RMDN2
NARS1
NUDT15
NUP85
CHIC2
H4C3
ZNF451
FAM133B
FAM53C
CDC25C
FAM162A
CCDC58
PLAG1
LTBR
CHCHD7
CCN2
AGPS
ABCB6
MOGAT1
PPIL3
NIF3L1
HPN
F2
ATP6V1B2
KIAA1958
C9orf147
POLR2C
RARS1
TTI1
RPRD1B
TBL3
PCF11
MRPL16
TCAIM
MARCHF8
NAA20
TOMM5
H4C4
OXA1L
KRI1
CUL7
RAB10
UGT2B10
ABHD10
CLK3
TEX2
SEC14L4
RPUSD4
FAM118B
SPTSSA
TRIB1
G6PC3
PCNX4
ZBTB9
GCHFR
CTSH
RTN2
FOXN2
ATXN7L2
BCL7B
TINF2
FEM1C
MARCHF7
LATS1
MAPK11
PUS10
PEX13
GXYLT1
RGPD8
RGPD5
TUFM
SH2B1
ATRN
TNFRSF21
IL1RN
TUBB2A
FUT5
CHD8
ILF3
USP36
SC5D
PALB2
DCTN5
SRSF6
CRNKL1
CFAP61
PNPT1
METAP1D
SLC38A2
C16orf46
NDUFA10
CASC3
FANCA
PGAP3
ERBB2
ZBTB3
TENT4B
C12orf65
CHGA
AP3B2
SNX5
MGME1
NMS
TRPC4AP
PIKFYVE
SCNN1G
MIEN1
BRF2
DSN1
FASTKD1
SURF6
SLC25A26
IL9
ZNF23
WDR43
SLC37A4
SLC24A1
UTP4
DERPC
CHTF8
HEXB
PCID2
CUL4A
DGUOK
PXT1
KCTD20
ATP5MC3
CGGBP1
RPS8
C3orf38
SPRED2
IREB2
ACSL6
ERMARD
NSG2
TATDN3
NSL1
AASDH
LRRC57
HAUS2
COMMD2
SUPT3H
FEM1B
BHLHE40
DEPDC7
RSAD1
NCBP2AS2
NCBP2
SRARP
ORAI3
LARP1
ITPR2
CYBA
ACSL3
MAT2A
FBXO4
RETSAT
ELMOD3
CEP192
STAG1
EHBP1
EFHD1
TUT1
FBXW8
SNTG1
ODC1
DIABLO
H4C5
RDH14
DHRS4
ZNF543
EMC8
COX4I1
MESP2
GNE
ZSCAN12
PHKB
ITFG1
POLR1B
ATAD5
SELENOI
MRPS34
KEAP1
EME2
DNAJC19
ADGRF3
ZNF337
SRSF5
ZNF721
PIGG
ANKHD1-EIF4EBP3
ANKHD1
NR1H3
ACP2
CBX1
MICU2
RPL29
TBRG4
TXNDC15
VPS28
TBC1D2
SPATA33
MON2
BRIX1
GPCPD1
DNAH14
COPS6
PRKRA
PJVK
TIGD6
HMGXB3
TSR3
PABPN1
GNPTG
AMZ2
ZNF248
PDE8A
HERPUD1
SECISBP2L
TASOR
SLC35B3
TMEM45A
LSG1
H2BC5
RMND5A
GDAP1
PUM3
TDRKH
POR
RPL37
LIMS1
LANCL1
CPS1
KDM8
CHPT1
A2M
COG7
NFATC3
POLE3
DYNC2I1
C9orf43
C18orf25
SLBP
ROMO1
CCAR2
ACYP2
TRIP11
ERLIN1
CDC42
ZNRF2
GAN
DUS3L
DHRS4L2
CCDC83
HEXIM1
ARSB
CDC73
TDRD7
TPX2
ALKBH2
KPNA5
FLOT1
FGFBP3
MRPL20
BNIP1
KPNA1
USH1G
OTOP2
DHX8
ZNF326
ARHGEF7
ZSWIM1
SDHAF2
CPSF7
C3orf52
BLCAP
ARID5B
TRAF6
RAG1
PSME3
ASNSD1
ASDURF
ZMPSTE24
REX1BD
GPT2
MKS1
JRK
TOMM6
CHORDC1
AGL
YBEY
MCM3AP
KCNAB2
ACCS
RRP15
SLC25A13
DDX19A
TOMM34
TMA16