ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXD1 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◣ HOXD1: Average

◢ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
INSM2
DEPP1
MAMDC2
LIN28A
NKX1-1
HTR5A
NRL
DCAF11
FAM24A
CELSR3
TNFAIP2
MTRNR2L2
MSH3
DHFR
GLRA1
L1CAM
RAB37
DUX4
PTH2R
CPLX2
KCNH7
MTRNR2L1
SLC6A12
ZNF117
ERV3-1-ZNF117
ERV3-1
MTRNR2L8
SH2D3C
SMIM17
ZC3H18
WDR74
STX5
EPHA10
SCRT1
DGAT1
BARHL1
ZNF48
TBC1D10B
MYLPF
RTBDN
MAST1
CHGB
MAPK8IP2
SCN1A
EAPP
KRT39
FRG2C
OTX1
RANBP3
NAA20
IL11RA
GALT
MUC3A
BOD1L2
DLGAP3
RIN2
FAM3A
LOC102724770
DGCR6
KRTAP5-6
SMIM19
SLC20A2
LHFPL5
CLPS
SNAP25
STX16
ITGB1BP1
CPSF3
UNC80
OPA3
SCRT2
LRMDA
VGF
MYT1
SIGLEC10
KCNH6
ZNF670
ICMT
HES3
SST
GDAP1L1
PTPRN2
SRRM3
HPCA
GRM1
ANK1
KCNK12
ORMDL3
GSDMB
MMP24
CCDC200
MTRNR2L9
UBE2Q1
CHRNB2
SH3BGRL2
TECTB
OGDHL
ZNF23
CCDC92B
TRIM48
FRG2
PLEKHM3
FOXJ2
BPIFA3
NPPB
NTSR2
LPIN1
CA4
RIPPLY2
CYB5R4
TMEM230
PCNA
CDS2
INTS12
GSTCD
MRPL44
SLC38A3
SLC7A6OS
PRMT7
STMN3
RTEL1
PTPRN
NDUFAF5
ESF1
SLC45A4
CDK5RAP1
PSMF1
TMEM242
H4C12
H4C11
H2BC15
H2AC15
STAT1
SLC12A5
SCGN
COL23A1
CEMIP
METTL9
PPP3CA
TM9SF1
IPO4
DNAJC6
SLC39A3
MRPL39
GCFC2
NOMO3
ABCC6
GTF3C3
CACNA1B
C2orf66
SEC24A
SAR1B
PIH1D1
ALDH16A1
MTERF4
EXT1
RPS7
RAD54L2
AAR2
CHRM4
USPL1
HMGB1
SEZ6
TMC7
NME1
MED23
JPH4
SCFD1
PRMT5
FBLN1
DCP1A
ACSS3
RANBP2
PTGDR2
MARCHF4
TMEM181
RBM28
PDE6D
MTF2
COPS7B
NUF2
CDIP1
EBI3
PDE4C
LEMD3
PGBD5
JUND
IQCN
CWC25
FAM227B
DTWD1
SP2
VTN
SEBOX
SARM1
C14orf93
SLC35A3
HDAC2
TRIP4
PCLAF
MFF
PEX3
PET117
MRPL30
MITD1
KAT14
ADAT2
RAP1GAP
DDX1
SF3A3
PAX5
TIGD1
EIF4E2
DPY19L4
DTD2
VWC2L
NSFL1C
TSSK4
MAP1LC3B
KLF11
FBXO31
PTPRH
COMMD1
CCT4
FOXJ3
PDXDC1
CCDC88A
NOL7
PRMT8
PHF3
ZNF285
USP30
TGM1
RABGGTA
NLGN4Y
MOB4
STX18
BHLHE40
TACO1
LRRC37A3
IRF9
SLC25A21
WTAP
SOD2
SNAP47
JMJD4
DUS1L
KANSL3
FER1L5
CCN2
ZNF841
NOC4L
DDX51
SEZ6L2
NPIPA3
NPIPA2
ASPHD1
CCL16
USP14
QTRT1
SPINK1
HEATR5A
CPPED1
CALM1
WBP2
UNC13D
EXOC3L4
CADM3
NOC3L
RFC1
NHLRC1
HBQ1
HBA2
HBA1
TSPAN10
NPLOC4
CCNL1
ZFR2
ATCAY
SLC30A6
KDM3A
FURIN
CCNC
RESP18
CLVS1
MRPL58
SNRPB2
PKP4
CCDC148
PTPRS
LRRC59
TANK
CNPY3
PGRMC2
COPS8
PLA2G10
JPH3
EXOC2
SH3YL1
BICDL1
ACP1
GRIA2
METTL21A
TRMT61B
APOB
PLRG1
KATNA1
GOLM1
FGB
POLR3E
TPH2
MTIF2
FRA10AC1
MRPL40
HIRA
ALOX15B
AKAIN1
ZPBP2
PPFIA3
IKZF3
GPR158
C19orf73
ID1
PRR13
HOXD1
XRN2
ANKRD36
ZNFX1
RBM39
PMS2
AIMP2
SNTG1
ACTL6B
TMEM186
PMM2
MAPK11
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HSPE1-MOB4
HSPE1
HSPD1
NEUROD1
LAMP1
SCIMP
RBL1
PTP4A2
PIK3R3
TMEM107
SEPTIN9
NDUFA12
EPM2A
UGT1A1
PDE1C
WASHC2C
SHOX2
RSPH3
PSMD3
FUS
H4C3
H1-6
TMEM41A
TMEM222
TSN
TEFM
CHGA
HS3ST2
PTMA
ZNF703
SNRPC
SEC23A
FST
FGG
TOB1
STAT3
SNRPB
NUS1
HDAC4
TUBGCP3
TSEN54
LLGL2
DRG2
CASKIN2
ZNF165
OR1F12
HHATL
SOGA3
TBC1D19
EVI5
HSP90AB1
TTI2
CPVL
CHN2
SLC44A1
TOMM34
STK4
RTF2
INPP1
WDR36
ZFYVE27
TBCD
NCOA5
MDP1
CHMP4A
AIP
LTV1
CTNNB1
SPNS2
OPA1
PPP4R3B
NDUFS3
KBTBD4
HECTD1
FAM180B
SRSF2
PREPL
MFSD11
CAMKMT
GUSB
ATIC
AATF
SYP
RNF130
GORASP2
GBP6
TP53I3
SF3B6
NFAT5
NET1
FAM228B
ABCA3
ZSWIM1
ZNF219
TMEM253
SULT4A1
SPATA25
NEURL2
CTSA
MRPL21
IGHMBP2
SMG8
SVOP
METTL15
KIF18A
AHSG
TRMT6
MCM8
MRPS31
CCL20
EXOSC6
CABP7
ATP6V1B2
TCP10L
GOT2
DUS2
DPEP2NB
DDX28
PRKDC
POLDIP3
ODC1
MCM4
CSTF1
CALM2
AURKA
TRAF6
STK25
SCAMP5
RAG1
PRKAB2
PRDX1
CHD1L
RGMB
MRM3
GLOD4
FAN1
SIRT4
MRPL53
MOGS
BCKDK
RRP1B
KIAA1586
HSF2BP
SORL1
NXF1
METTL25
GMEB2
FABP1
EXOSC2
CCDC59
ZNF473
VRK3
SPRED2
KIZ
FBXL16
FAM222A
CCL14
PTPN4
DMAP1
MLN
HS6ST1
ZNF292
RPTOR
ROCK2
PALB2
KIAA1958
DCTN5
CACNB2
C9orf147
TMEM106B
NUP54
NDUFS7
MAP3K7CL
KIF5C
HDDC2
CCT8
PHF14
GEMIN2
COMP
ZER1
POLR2C
MMAA
H3C12
H2BC17
H2AC17
FANCL
E2F3
ZNF451
USP42
FAM207A
ACSL3
DDX18
CHD9
TASOR2
SYNGAP1
PHF1
OPRM1
NUP153
MRPL3
CUTA
LONP2
CPS1
CMTR2
ABCC11
SRP54
SOS1
NDUFC2-KCTD14
NDUFC2
ACIN1
FAM187A
EFTUD2
CCDC103
XKR9
THUMPD1
POLR2J3
LACTB2
DHRS4L2
BRMS1L
ZBTB45
SLC27A5
MRPS23
DCAF10
CBWD5
LDAH
MIA2
MAT2A
FAM98B
CHEK1
ZC3H6
SPTSSA
RBM12
CRH
CPNE1
ZNF503
ZGPAT
ARFRP1
VNN3
HMGA1
WDR31
RUVBL1
RFT1
PSMD7
ERMARD
EEFSEC
CPNE9
BSPRY
UCHL5
RO60
PMVK
AP3B2
VTA1
SNRPD1
RPS6
NMBR
MUC5B
ALG10B
SPOP
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
EBAG9
LOC102724265
GGA2
EIF2D
WDR43
TAF12
SLC7A14
SLC18A3
RPL31
MARCHF8
IDH3B
CHAT
TMEM101
KCNH4
ITGB3BP
HCRT
EFCAB7
CDCA7
XYLB
PYURF
PIGY
HERC3
H2BC14
H2AC14
SLC37A4
HAAO
GPCPD1
COQ9
CIAPIN1
CDK5R2
RMND1
RBM45
PDE11A
NOMO1
HNF4A
FAM133B
ARMT1
H2BC5
H1-4
FITM2
BMS1
WASHC1
FN1
FAM53C
CDKN2AIPNL
CDC25C
TOMM22
PPIL4
PCK2
DNMT3A
TRIB1
TMEM262
MAP2K2
DHRS2
CTNND2
THUMPD2
ERN1
TVP23B
RTTN
HEXA
DHDDS
ZC3H7A
RNF103-CHMP3
RMND5A
KCTD5
GJA10
DNAH14
TMEM129
TF
TACC3
SLBP
MRPS18C
HELQ
FZD5
PUM2
PPP1R3C
C16orf89
ALG1
TRIM67
MTHFD1L
E2F6
NOSTRIN
LMLN2
ISG15
EEF1AKMT4-ECE2
EEF1AKMT4
EDC4
C14orf119
ALG3
ZNF337
WDR45B
TMEM179
RPS15A
TMEM14B
NCOA3
GPC6
GINS1
C16orf72
ZBTB4
THAP4
STRADA
SLC35G6
POLR2A
NFKBIA
MRI1
COG1
C19orf53
ATG4B
ZFP1
UBAP2
TOMM5
SLC24A1
MAGOHB
TTPAL
LOC112694756
UTP4
USP40
TRDMT1
EIF2B3
DERPC
CHTF8
PYGB
PTDSS1
POLE4
MTERF3
HM13
SYN1
NEU4
CFP
THNSL1
TBC1D14
RRN3
NPIPB9
AKAP10
TTC4
TRIB3
THOP1
SGTA
FAM177A1
EFCAB13
ANAPC11
ALYREF
AARS2
TMEM167B
SLC25A10
RPL27
POLR3G
N6AMT1
MRPL12
MBLAC2
IFI35
TRMT2A
TOP3B
RANBP1
ANO10
ABHD5
WDR35
SLC9A1
SEC11C
CBWD3
ZSCAN30
TTLL4
SRSF6
RUSF1
RARS1
PIGU
CCT2
FAM163B
FAM162A
CCDC58
ACSL4
POLR3D
ID2
CERS6
ADGRG6
TTI1
RPRD1B
ELL
BIRC5
AURKAIP1
ZNF513
SNX17
NID1
NEK2
LGR5
GTF2H2C_2
GTF2H2C
EIF2B4
COPS7A
ZNF3
PSME3
MRRF
G2E3
DNAJC24
DCDC1
COPS6
BECN1
BCL2L11
TUBB3
NABP1
MYBL2
MC1R
ZNF425
ZNF398
TOX4
SCNN1A
RAB2B
PLAG1
NUP62
LTBR
IL4I1
FBXO4
CHCHD7
C10orf88
ATF5
TRIAP1
TOMM40L
RAB5IF
NSG2
MTHFD2
FN3K
FGA
FCER1G
COX6A1
ARL6IP1
APOA2
YARS1
S100PBP
PEDS1-UBE2V1
PEDS1
KNOP1
ENO1
TUBD1
TMEM39A
TAMM41
SNX18
RPS6KB1
POGLUT1
NCL
INSIG2
ATF7IP2
TMEM248
OGFOD3
MRPS5
HEXD
SSBP1
PRRC2B
PPP1R3E
FAAH
CBWD6
BCL2L2-PABPN1
BCL2L2
NOL10
CYP3A7-CYP3A51P
CYP3A7
AGPS
TRAPPC6B
TAB1
SUN2
PNN
H1-2
BCL7B
ARHGAP18
TINF2
TBL3
SNF8
RPS2
RNF151
PLA2G2A
PIGL
NOXO1
NCOR1
H4C4
H3C4
H2BC6
GMPR2
ASNSD1
ASDURF
SCGB1C2
SCGB1C1
ODF3
NBPF1
FEM1C
DNAJB3
ZNF296
TMEM169
SNX5
PPM1H
PECR
MGME1
GINS3
GEMIN7
EPHX2
CRNKL1
CFAP61
WDFY1
L2HGDH
GOSR2
DMAC2L
ADNP
ZNF770
TBC1D13
TATDN3
SCG3
RRP15
RNASEH1
PPP5C
NSL1
GTF2H2
ERLEC1
ASB3
UQCRQ
THOC3
NGDN
LEAP2
INHBE
GLI1
GDF9
GDAP1
EEF1AKMT2
DSTYK
DIDO1
APOC3
APOA1
ACAD9
ABRAXAS2
USP4
UNK
TOB2
KRR1
HNRNPD
H3-3B
AHCY
VPS13A
URGCP
RPL10A
NFE2L2
MAPKBP1
GZF1
ARFGAP3
ANKRD36C
RNF149
PMS1
OSBPL11
ORMDL1
MNAT1
MANBAL
EDARADD
CCDC174
BIRC2
SEC14L1
PUM3
PPP1R11
POLR1H
MARCHF7
LSM12
LRP6
G6PC3
AGMAT
WNK4
VPS25
SPECC1
SLC25A13
SIT1
HCN2
ETV4
CCDC83
CCDC107
ARHGEF39
UNC50
MRPS15
COA5
BIRC6
TSPO
SLC25A51
P4HA1
MCAT
AASDH
PNPT1
PDE4DIP
PCDH8
MLLT1
EEF2K
CTNNA2
CETN3
ATF2
WDR70
STOML2
PIGO
NUP155
METAP1D
GRAMD1A
FAM214B
ENOSF1