ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360007 | LoVo
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◣ SRX360007: LoVo

◢ HOXD1: STRING

RGPD2
RGPD1
MTRNR2L8
MTRNR2L2
NPAS4
XKR7
IQSEC3
ING3
DEPP1
HTR5A
NRL
DCAF11
CELSR3
GLRA1
L1CAM
RAB37
CPLX2
SH2D3C
WDR74
EPHA10
SCRT1
BARHL1
TBC1D10B
MYLPF
CHGB
MAPK8IP2
OTX1
RANBP3
IL11RA
RIN2
LHFPL5
SNAP25
STX16
ITGB1BP1
CPSF3
UNC80
OPA3
SCRT2
VGF
KCNH6
ZNF670
HES3
SST
SRRM3
HPCA
GRM1
ANK1
KCNK12
MMP24
CCDC200
MTRNR2L9
CHRNB2
SH3BGRL2
OGDHL
CCDC92B
PLEKHM3
NPPB
NTSR2
CYB5R4
PCNA
INTS12
GSTCD
MRPL44
SLC7A6OS
PRMT7
STMN3
PTPRN
NDUFAF5
ESF1
SLC45A4
CDK5RAP1
PSMF1
TMEM242
H4C12
SLC12A5
SCGN
METTL9
PPP3CA
IPO4
DNAJC6
SLC39A3
MRPL39
GCFC2
ABCC6
GTF3C3
PIH1D1
MTERF4
EXT1
RPS7
RAD54L2
AAR2
CHRM4
USPL1
HMGB1
SEZ6
NME1
MED23
SCFD1
PRMT5
DCP1A
RANBP2
PTGDR2
MARCHF4
TMEM181
RBM28
MTF2
COPS7B
NUF2
CDIP1
PDE4C
LEMD3
PGBD5
CWC25
FAM227B
DTWD1
SP2
SLC35A3
HDAC2
TRIP4
PEX3
PET117
MRPL30
MITD1
KAT14
ADAT2
DDX1
SF3A3
TIGD1
EIF4E2
DPY19L4
DTD2
VWC2L
NSFL1C
TM9SF1
MAP1LC3B
KLF11
FBXO31
COMMD1
CCT4
FOXJ3
SAR1B
CCDC88A
NOL7
PHF3
RABGGTA
MOB4
STX18
TACO1
LRRC37A3
IRF9
SLC25A21
WTAP
SOD2
SNAP47
JMJD4
DUS1L
KANSL3
SEZ6L2
ASPHD1
USP14
HEATR5A
CPPED1
CALM1
NOC3L
RFC1
NHLRC1
HBQ1
TSPAN10
NPLOC4
CCNL1
SLC30A6
KDM3A
CCNC
CLVS1
MRPL58
SNRPB2
PKP4
PTPRS
LRRC59
TANK
CNPY3
PGRMC2
COPS8
EXOC2
UBE2Q1
BICDL1
GRIA2
TRMT61B
APOB
KATNA1
POLR3E
TPH2
MTIF2
FRA10AC1
MRPL40
HIRA
AKAIN1
IKZF3
GPR158
PRR13
XRN2
ANKRD36
ZNFX1
RBM39
PMS2
AIMP2
SNTG1
ACTL6B
TMEM186
PMM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HSPE1-MOB4
HSPE1
HSPD1
LAMP1
RBL1
PTP4A2
PIK3R3
NDUFA12
EPM2A
USP30
PDE1C
WASHC2C
RSPH3
PSMD3
FUS
H4C3
TMEM41A
TMEM222
TSN
TEFM
ZNF23
HS3ST2
SNRPC
SEC23A
TOB1
STAT3
SNRPB
NUS1
HDAC4
TUBGCP3
TSEN54
DRG2
CASKIN2
ZNF165
CHGA
TBC1D19
EVI5
TTI2
SLC44A1
RTF2
WDR36
ZFYVE27
TBCD
NCOA5
MDP1
AIP
LTV1
CTNNB1
OPA1
PPP4R3B
NDUFS3
KBTBD4
HECTD1
SRSF2
PREPL
MFSD11
CAMKMT
GUSB
ATIC
RTEL1
AATF
SYP
STK4
RNF130
GORASP2
SF3B6
NFAT5
NET1
FAM228B
ABCA3
NEURL2
CTSA
MRPL21
IGHMBP2
SMG8
SVOP
TRMT6
MCM8
MRPS31
EXOSC6
ATP6V1B2
GOT2
DUS2
DDX28
PRKDC
POLDIP3
ODC1
MCM4
CSTF1
CALM2
AURKA
TRAF6
TMEM230
STK25
SCAMP5
RAG1
PRDX1
RGMB
MRM3
GLOD4
FAN1
MRPL53
RRP1B
KIAA1586
HSF2BP
NXF1
METTL25
FABP1
CCDC59
ZNF473
VRK3
KIZ
PTPN4
DMAP1
ZNF292
RPTOR
PALB2
KIAA1958
DCTN5
C9orf147
TMEM106B
NUP54
NDUFS7
HDDC2
CCT8
PHF14
GEMIN2
ZER1
POLR2C
MMAA
H2BC17
H2AC17
FANCL
E2F3
ZNF451
USP42
FAM207A
ACSL3
DDX18
CHD9
TASOR2
PHF1
OPRM1
NUP153
MRPL3
LONP2
CMTR2
ABCC11
SRP54
SOS1
NDUFC2-KCTD14
NDUFC2
ACIN1
EFTUD2
CCDC103
XKR9
THUMPD1
SIRT4
POLR2J3
LACTB2
DHRS4L2
BRMS1L
ZBTB45
MRPS23
DCAF10
CBWD5
LDAH
MIA2
MAT2A
FAM98B
CHEK1
ZC3H6
SPTSSA
RBM12
CRH
CPNE1
ZGPAT
ARFRP1
VNN3
HMGA1
WDR31
RUVBL1
RFT1
PSMD7
GDAP1L1
ERMARD
EEFSEC
CPNE9
UCHL5
RO60
PMVK
AP3B2
VTA1
SNRPD1
RPS6
NMBR
ALG10B
SPOP
H4C15
H4C14
EBAG9
GGA2
EIF2D
WDR43
RPL31
MARCHF8
IDH3B
HSP90AB1
TMEM101
KCNH4
ITGB3BP
EFCAB7
CDCA7
XYLB
PYURF
PIGY
HERC3
H4C11
SLC37A4
HAAO
GPCPD1
COQ9
CIAPIN1
RMND1
RBM45
FAM133B
ARMT1
H1-4
FITM2
BMS1
FN1
FAM53C
CDKN2AIPNL
CDC25C
TOMM22
PPIL4
PCK2
DNMT3A
TRIB1
MAP2K2
DHRS2
THUMPD2
ERN1
TVP23B
RTTN
HEXA
DHDDS
ZC3H7A
RMND5A
KCTD5
GJA10
DNAH14
SLBP
MRPS18C
HELQ
FZD5
PUM2
PPP1R3C
ALG1
TRIM67
MTHFD1L
E2F6
EEF1AKMT4-ECE2
EEF1AKMT4
EDC4
C14orf119
ALG3
ZNF337
WDR45B
TMEM179
RPS15A
NAA20
TMEM14B
NCOA3
GINS1
C16orf72
ZBTB4
THAP4
STRADA
POLR2A
NOC4L
NFKBIA
DDX51
C19orf53
ATG4B
ZFP1
UBAP2
TOMM5
SLC24A1
MAGOHB
TTPAL
LOC112694756
UTP4
USP40
TRDMT1
EIF2B3
DERPC
CHTF8
PYGB
PTDSS1
POLE4
MTERF3
HM13
SYN1
THNSL1
RRN3
AKAP10
TTC4
SGTA
FAM177A1
EFCAB13
ANAPC11
ALYREF
AARS2
TMEM167B
SLC25A10
RPL27
POLR3G
N6AMT1
MBLAC2
TRMT2A
TOP3B
RANBP1
ANO10
ABHD5
WDR35
SLC9A1
CBWD3
ZSCAN30
TTLL4
SRSF6
RUSF1
RARS1
PIGU
CCT2
FAM163B
FAM162A
CCDC58
POLR3D
ID2
CERS6
ADGRG6
TTI1
RPRD1B
BIRC5
AURKAIP1
SNX17
NID1
LGR5
GTF2H2C_2
GTF2H2C
EIF2B4
COPS7A
PSME3
MRRF
G2E3
DNAJC24
DCDC1
COPS6
BCL2L11
NABP1
MC1R
ZNF425
ZNF398
TOX4
RAB2B
PLAG1
NUP62
LTBR
IL4I1
FBXO4
CHCHD7
C10orf88
ATF5
TRIAP1
RAB5IF
NSG2
MTHFD2
FGA
ARL6IP1
APOA2
YARS1
S100PBP
PEDS1-UBE2V1
PEDS1
KNOP1
ENO1
CCN2
TUBD1
TMEM39A
TAMM41
SNX18
RPS6KB1
NCL
INSIG2
ATF7IP2
TMEM248
MRPS5
SSBP1
PRRC2B
FAAH
CBWD6
NOL10
AGPS
TAB1
H1-2
BCL7B
TINF2
TBL3
SNF8
PIGL
H4C4
ASNSD1
ASDURF
WASHC1
NBPF1
FEM1C
EAPP
TMEM169
SNX5
PPM1H
PECR
MGME1
GINS3
GEMIN7
EPHX2
CRNKL1
CFAP61
WDFY1
GOSR2
ZNF770
TBC1D13
TATDN3
SCG3
RRP15
RNASEH1
PPP5C
NSL1
GTF2H2
ERLEC1
ASB3
THOC3
NGDN
LEAP2
GDAP1
EEF1AKMT2
DSTYK
ACAD9
USP4
TOB2
KRR1
HNRNPD
H3-3B
AHCY
RPL10A
NFE2L2
MAPKBP1
GZF1
ARFGAP3
ANKRD36C
RNF149
PMS1
ORMDL1
MNAT1
MANBAL
CCDC174
BIRC2
SEC14L1
PUM3
POLR1H
MARCHF7
LRP6
G6PC3
AGMAT
VPS25
SPECC1
SLC25A13
ETV4
CCDC83
CCDC107
UNC50
MRPS15
COA5
BIRC6
SLC25A51
P4HA1
MCAT
AASDH
PNPT1
MLLT1
EEF2K
CETN3
ATF2
STOML2
STAT1
METAP1D
ENOSF1
DDX19A
CLK1
ANKAR
ZMPSTE24
KIF16B
CLCN7
CBWD1
WFDC3
MBTPS2
LAMTOR5
KIF15
KIAA1143
DNTTIP1
CNN3
ATP5F1E
ALG6
NUP160
COX16
ZC3H15
SARAF
PPIP5K2
PCF11
EDEM2
TDRKH
PDXDC1
LDHA
HPS5
GTF2H1
ZNF461
WDR70
TSGA10
TDP2
POR
NOP9
NOP56
MRPL16
HEXIM1
DNAJC25-GNG10
DNAJC25
DNAJC10
DHRS1
CPSF1
ARSB
AP3S1
ADAM17
ACOT13
TXNDC9
TIPARP
LATS1
GMCL1
EIF5B
TRIM44
RPL12
REX1BD
LRSAM1
HUS1
EIF3B
ATP5MC2
TF
MAPK11
ENTPD6
CRLS1
C2orf42
TTC30A
SUMF1
SEC13
PNN
PARL
NAT10
GPT2
COPS4
SRSF11
MMADHC
DIABLO
ACY1
HEXB
H4C5
ZNF8
STARD4
IARS1
CITED2
SLC38A2
PCID2
CUL4A
CLUAP1
CLEC16A
TGOLN2
SEC24A
CCDC57
C17orf75
SRSF5
PUS10
PRORP
PPP2R3C
PEX13
NMS
CNTRL
CLN5
CDC73
CCDC43
TTC26
TAF5
GFM2
ABT1
ZDHHC7
PPM1D
PCIF1
LRRC57
HAUS2
HAL
COMMD2
ASF1A
ALKBH3
SEH1L
MTX2
LYSMD3
GLO1
TTC23L
SPNS1
PRKRA
PJVK
MDM2
DGUOK
C5
ATG16L1
ANKRD34C
TDRD7
SMG1
SEC62
SAAL1
RPL37
ROMO1
PCNX4
NFYC
ZNF721
TIGD6
SUPT3H
RDH14
PIGG
PBK
MKS1
ISOC1
HMGXB3
BTG1
ARFGEF2
VARS2
UFL1
DHRS4
CTBS
C16orf46
ARHGEF12
ABCF1
ABCD4
TRIM26
TRAPPC6B
SULT1A1
SRFBP1
SMARCD2
NEU4
NDUFA10
LIMS1
FTL
STAU1
SAYSD1
DDX27
CEP295
ATXN2L
ZNF518A
SPTLC1
RANBP6
PPP1CB
TOMM34
THOC1
PPARD
OGFOD3
ICE2
HEXD
GXYLT1
FBXW2
ESCO1
DCP1B
BBS1
USP37
PXT1
NOCT
MRPL41
LRRC29
KCTD20
CNOT9
ZSCAN25
VAMP4
UQCC1
TK1
NRSN1
MTLN
LANCL1
KHK
CPS1
ANKHD1-EIF4EBP3
ANKHD1
AFMID
ABCB6
YTHDF1
HMGCS1
C12orf73
TRPC4AP
TRMT11
PIGO
OXA1L
ORC4
MBD5
KRI1
JRK
G3BP1
CCAR2
VIRMA
SREK1
PIKFYVE
LOC100287896
LIPT2
H4C2
GPR78
CASC3
VRK2
USP31
TPX2
TBCB
SLC33A1
SIK2
RPS15
RGPD8
RGPD5
POLR2I
KDM8
GDF15
FEM1B
EIF3CL
EIF3C
DIDO1
DBI
CYCS
CFL2
CENPA
C2orf76
AGK
TMA16
TEX10
PRRT1B
POLR3B
NPM1
NME6
ITPR1
ALKBH2
ZNF543
USP34
TUFM
TIMM22
SH2B1
PAFAH2
MIPOL1
BRWD1
ATRN
ZNF843
XRRA1
SPCS2
RBSN
NCBP3
ERLIN2
ERCC5
EPB41L4B
DCLRE1C
CHPT1
BUD13
BLOC1S6
ZNF341
WDR24
TNFRSF21
SUPT7L
SLC4A1AP
R3HDM2
PRADC1
NUDT3
MOGAT1
LUC7L
CEBPZ
CCT7
PPIL3
NUBP1
NIF3L1
NAGK