ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478135 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◣ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
MTRNR2L2
MTRNR2L8
HTR5A
ATL3
CCDC200
WDR74
IQSEC3
XKR7
DNAJC11
ZCCHC7
ENOSF1
DHX40
RPL31
AIP
EPHA10
YPEL1
CEP295
L1CAM
NUP214
RNF130
PCNA
HPCA
ZNF280D
E2F6
BARHL1
CPLX2
MRPL40
HIRA
DIABLO
N6AMT1
H4C11
MTRNR2L9
AGBL3
CYB5R4
TASOR
TTC26
SRP19
TLR5
FMNL3
RGS2
H4C12
CELSR3
HES3
SRSF7
YDJC
NBPF1
RFC1
CALB1
GLRA1
ZNF74
LAMP1
CTNNB1
TRIM44
NET1
H2BC11
H2AC11
SCG3
OGDHL
VPS29
RAD9B
LRRC8B
MEPCE
ZCWPW1
PMS2
AIMP2
MST1
RPP25
SSBP1
THAP7
LUC7L2
FMC1-LUC7L2
CHCHD3
WASHC2C
UBE2Q1
NDC80
METTL4
PIK3R3
HPS5
GTF2H1
LZTR1
FAM111A
RPA2
PSMG1
FH
ERRFI1
ERMARD
SMIM12
EXD1
CHP1
SRSF6
PRMT2
TARS3
DPY19L4
SERPINI1
PDCD10
NOL7
EPB41L5
XKR9
LACTB2
TASOR2
MTF2
JMJD1C
REEP3
NKIRAS1
HBQ1
RPL15
TMED1
NXF1
ATG10
MLH1
EPM2AIP1
SLC16A1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
USP14
SRRM3
ZSCAN30
KIAA1958
C9orf147
SEC31A
DDX39B
FAM53C
CDC25C
P4HA1
THAP9
ABCA3
TRMO
MAPK8
RTL10
GNB1L
H4C14
H4C15
TSEN54
CASKIN2
PIAS1
KPNA2
CERS6
ZNF131
LRP2BP
ANKRD37
PRKRA
PJVK
CA8
MAPK8IP2
H2BC8
H2AC8
POLR2J3
WDR36
ANTXR2
DNAH14
PRAME
CASP2
DSTYK
GBA
MRPS33
NOP14
GRK4
CHGB
UBN2
PPA2
NUF2
TATDN3
NSL1
PEX3
ADAT2
MMADHC
PAFAH1B2
GLB1L2
DUSP23
DCP1A
EPM2A
WDR26
SSR3
AGPS
TPR
ODR4
METTL2B
LHFPL5
CACNG3
EIF2D
CNOT4
H2BC12
H2AC12
TBXAS1
HIPK2
CCNL1
NCOA5
TDG
TOP3B
CLTC
CNTRL
H1-2
C5
SNRNP48
VGF
NFE2L2
AREG
TEX15
RLF
ZNF800
SF3B5
H4C9
ZBTB18
HMGA1
KANSL3
BZW2
ANKMY2
DGCR8
H2BC17
H2AC17
MLF1
DHDDS
BMS1
RPS20
PGBD5
H3C2
LRRFIP2
CAMTA1
NOLC1
MAT2A
FBXO4
TANK
THAP5
DNAJB9
PCMTD2
MKLN1
TMEM191B
SEH1L
COX18
MMAA
SUMF1
C5orf51
SRSF2
MFSD11
GAGE7
GAGE5
GAGE4
GAGE2B
GAGE12I
FBXO31
GMNN
NEK2
ELAPOR2
POT1
TMX4
ZC3H6
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
KCNK12
MAPK1
ARID2
PIGF
CRIPT
TRMT2A
RANBP1
CZIB
POLE4
CD55
VTA1
NMBR
XYLB
SLC35E2A
ARL4A
MKRN2
PMVK
CDC73
METTL6
EAF1
IER5
POGLUT3
XPC
LSM3
CUL5
SELENOH
SLC39A3
MTHFD2
ZFR
DDX21
TCF12
UTP11
SNAP25
MTF1
GDAP1
EZH2
PPIL2
FAM3C
CPQ
MAP7
TMEM106B
GTF2H2C_2
GTF2H2C
H2AX
AHCYL2
ZMYM6
ARFGAP3
SNRPE
LSM8
MGA
SGF29
EXO1
ZBED9
THOC3
USP9X
TUBA1B
KIF2A
TCAIM
CITED2
AARS2
RDH14
KAT6A
SAYSD1
PDCD6IP
ADK
KATNA1
ZNF22
SRSF1
METAP1D
CCT2
SNAPC5
CDCA7
SMCHD1
THEM6
SKAP2
EFCAB13
SIK2
PSMB2
ZFC3H1
THAP2
BLOC1S6
ANAPC10
ABCE1
ZNF398
NUCKS1
LYSMD3
ZNF425
COMMD3-BMI1
COMMD3
ZFP69
RPS27
FRG1
SBDS
TNPO1
MED15
NABP1
SS18
FER
SOD2
C1orf53
INTS12
GSTCD
WTAP
RAB37
CSTF3
PHF19
ABCC5
NUP62
IL4I1
ATF5
DNTTIP2
ANGEL2
THNSL1
SNAP29
PI4KA
GHITM
RYBP
JAGN1
CCDC71L
KIF14
MYLIP
SEC22C
NKTR
FAM227B
DTWD1
CENPC
HLTF
BAG6
APOM
NAP1L1
ACBD6
PDE7A
DNAJC6
DCLRE1B
AP4B1
GSTA4
PGBD2
BICD1
C8orf88
PLD6
TTC4
MARCHF8
ANKRD28
SOD1
DARS1
RBM28
ZNF391
HDAC2
KDM1A
CDC16
FANCC
KTI12
ZFP1
ZNRF2
IFT57
BTBD8
GLCCI1
SLC17A5
SERPINB9
POU2F1
NFYC
ARRDC3
DNAJB12
UTP3
NSFL1C
CUL9
BNIP2
MAP3K4
SPO11
EXOG
STXBP3
CRKL
SLC30A9
H3-3B
EIF5A2
NFKB1
PGRMC2
PRDX1
PAXBP1
NMNAT1
LZIC
ARMC1
HAT1
CHD1
TMEM209
TRIAP1
UBE2D3
PCIF1
SPTLC1
COQ2
SPG11
PPIL1
MDM4
WASL
SMAD5
STAM2
H4C2
BRAF
FUS
TP53BP2
RAB4A
AGGF1
INAFM2
P2RX6
RAB36
SCAF11
ICE2
EXOSC9
NR1D2
KIAA0895
TAF9
RAD17
AK6
EIF2B3
ANLN
PPP1R8
YIF1A
PPM1D
TTC33
ANKRD36
TOMM20
RRP15
NUP54
IMMP2L
BLOC1S5
RBM22
ARL6IP1
GBE1
RANBP3
NRF1
FANCD2
SENP8
MYO9A
KLHL12
PNO1
AHI1
UBP1
NADK2
SLC25A46
ZNF786
ZNF558
HSPA1L
HSPA1A
OR2L13
IQUB
SIRT5
DHX9
ZBTB37
SERBP1
PUS10
PEX13
MTERF1
DYNC1I2
UCP2
GPR155
CCNC
SUPT3H
CCNA2
MBNL1
COX20
AP1S1
TTC21B
PDXDC1
MAD1L1
FAM133B
RANBP2
SLC35B4
TMEM242
PARL
TBC1D15
ADNP
UBE2L3
ERAP1
RPS24
ZFAND5
RWDD3
STX16
CBLL1
GET4
RPS3A
KIF15
KIAA1143
POLR3E
ANKRD36C
COA7
TRIM4
MTPN
LUZP6
HSPA1B
RPAP2
GLMN
CEP85L
TMEM184C
MAK16
CSDE1
RSPH3
INO80
TBRG4
KLHL22
UBE2D2
PSMD14
PET117
METTL5
KAT14
TM9SF1
AGO3
TMEM168
PRDX6
MCCC1
DTWD2
ELOVL1
N4BP2
SMIM10
NUP42
ERI1
SRSF4
RIC8B
NGLY1
SPATC1L
RIDA
POP1
OXSM
LCLAT1
PC
CD33
HNRNPH3
RSRC1
CENPE
ARHGEF10
DUSP12
GRM1
MTX2
ZNF669
BPNT2
ZFPM1
DENND1B
DYNC2I1
PSMD5
NDUFS7
SVIP
TCERG1
FBXO28
MTR
MARCHF4
RPSA
ITSN1
CRYZL1
TMEM191C
MNS1
ZNF280A
ECI2
TRIM37
CBWD5
CBWD3
CBWD6
C8orf37
RBPJ
MDN1
RPLP1
ZKSCAN8
TNFRSF21
MBTPS1
DCAF10
YTHDC1
OSBPL9
MCM6
TMEM185B
H2BC13
H2AC13
HP1BP3
AASDH
MRPL17
TTC14
ZYG11A
RPL5
PHF3
AFF4
NBN
DNAJC10
COPG2
C22orf39
RUFY3
TOR1AIP1
AHCTF1
DMAP1
MED23
HES4
MVK
THUMPD3
SREK1IP1
CWC27
SLC25A51
DDI2
DARS2
CENPL
DCAF6
PUM2
USP30
SLC24A1
YIPF5
KCTD16
PRMT3
PDHB
NAMPT
E2F3
PBX3
ITGAV
MINDY3
ZNF280C
WASHC5
NSMCE2
DNAJC19
EEF1A1
TNPO3
PSMA1
CCDC88A
ADO
ATP5MC3
GPN2
H2BC15
H2AC15
ANKRD36B
ASAH1
PPP1R12B
GOLGA4
LRCH3
GGH
BCAR3
PPT1
PTCD2
MRPS27
ATG4C
ATF3
ANKRD50
MTMR2
ZBED8
COPB1
PHACTR2
SERINC3
E2F7
SSBP2
ALDH1A2
SPRTN
EXOC8
AATF
SUCO
FANCL
NUP205
PHAX
CCDC91
PON2
NPM1
LDAH
FAM98B
GOLIM4
CETN3
PYURF
PIGY
HERC3
GNL2
ID1
FANCI
HOMER1
DGCR6L
ZNF862
CLASP2
TDRKH
FBXO30
OLA1
LCA5
OR4F4
PPFIA4
BTBD10
LTV1
TFRC
PKP4
TAF7
DDX59
CCDC148
KDM7A
RINT1
GPR158
INKA2
DDX20
SMARCA5
SETD5
PARPBP
NUP37
ZC3HC1
MRPS16
KRIT1
ANKIB1
ZNF397
ZNF670
BTG1
H3-3A
NCKAP1
DNAJC1
TP53TG3F
TP53TG3B
LOC102723655
KCNMB4
CKLF-CMTM1
CKLF
GTF3C4
DDX31
DDX3X
ZNF292
UAP1
STARD3NL
CDC7
ZC3H15
KANSL1
FBXW2
AP3S1
CRBN
TMED5
CCDC18
DDX50
ZNF596
RIF1
DUS4L-BCAP29
DUS4L
COG5
KDM4D
CWC15
C2orf73
BAZ2B
HNRNPH1
KDM3A
RAD23B
GDI2
IPO9
PPP1R10
MRPS18B
C12orf73
RWDD1
PPP1R11
LYPLAL1
ZNFX1
SMN2
SMN1
TRA2B
HINT3
MFAP3
FAM114A2
IPO7
ZSCAN25
DNAJC16
ATAD2B
DYNC1LI1
RHBDD1
NCDN
KIAA0319L
ALDH9A1
C3orf33
PDLIM5
CYCS
HBS1L
ELP6
IFRD1
FAM76B
CEP57
H4C3
H4C5
PTBP3
MACO1
CSRNP2
EIF2S1
ATP6V1D
RAB33B
THADA
CCNI
NDUFS3
KBTBD4
SECISBP2
ACYP2
MBTPS2
CCDC90B
EFCAB2
RBL2
GTF2B
DMTF1
NUTM2E
ZCWPW2
AZI2
PRKD3
RNF182
RPP38
YEATS4
MSL2
RSL1D1
TTC30A
COMMD8
SESN1
SLC25A28
MRPL58
FUT11
GOSR2
USP42
WDR89
PSMG2
CEP76
MORN2
DHX57
BCAP29
H3C10
IBTK
C10orf88
SF3A3
WDR3
GDAP2
VPS26C
YARS2
RPL22L1
STMP1
AMMECR1L
HIPK1
UBR2
FNIP1
BRIP1
FAM200B
ERCC6L2
ATP5PO
MPHOSPH6
MMS22L
ZBTB45
ZNF165
GTF2H2
PLS1
SSB
PLK4
EDEM3
NUP35
H2BU1
H2AW
MTFR2
PAIP2
SPRYD7
CSTF2T
MRTO4
EMC1
CISD2
TMEM186
PMM2
BIRC2
KBTBD7
RBM45
SKP1
PPIH
ISOC1
BBS5
CDK5RAP3
FUCA2
ZNF451
TMEM38B
OIP5
NUSAP1
CTBS
SNRPG
TRIP4
SS18L2
RPL37
RPL9
LIAS
ZBTB8OS
RBBP4
USP37
CNOT9
ALKBH3
EXOSC6
SLC35E3
PSMD7
TMEM19
LRIF1
DIPK2A
SCAF8
SLC26A2
ALG9
LPCAT4
KLHDC10
PHTF1
ZNF443
MCRS1
HMGB1
USPL1
UBE2S
NDUFAF6
LTA4H
ATL2
STEAP1B
PIGBOS1
PIGB
UBIAD1
PPIG
ZSCAN9
CYP51A1
FBXL17
ZNF57
NUDC
CKMT1A
DLL4
WDR13
RPL10A
CFAP410
IPO11
PAXIP1
TAMM41
RNF14
IPO13
TMEM17
FUT10
HMGN2
ZSCAN12
LSM10
CNOT2
KCNH1
MAN1A1
XRCC4
TMEM167A
CHPT1
TFB2M
CNST
RPL12
LRSAM1
ZFP91
FAM149B1
ECD
NCBP2AS2
NCBP2
RSL24D1
PDS5A
DR1
EBNA1BP2
CFAP57
SLC44A1
HEATR1
CHFR
SLC25A40
DBF4
PDSS2
DYNC2LI1
DENND6A
STIL
SNX15
EIF4G2
GTF2H5
LOC100287896
LIPT2