ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◣ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

GPAM
SLC35E2A
SLC35E2B
NOC4L
DDX51
SSNA1
ANAPC2
MRPL55
MTRNR2L2
MED9
CWC25
RBM42
DRG2
NUP153
MTRNR2L8
ADPGK
SIRT4
PSMB2
LSG1
FAM149B1
ECD
AP2B1
LANCL2
MRM3
GLOD4
MAGOHB
NOP9
DHRS1
TRMT61B
TBL3
CCDC86
PHF7
BAP1
SRRD
HPS4
MRPL2
KLC4
WDR74
MTRNR2L9
AASDH
UTP25
TRIAP1
FAF1
SPTLC1
SMG8
ERCC6L2
DNAJC19
FAM228B
SF3B6
PDCD7
ATXN1L
BDP1
RPL9
LIAS
RMDN3
FBXO34
LMBR1
NME1
RPS6KB2
GTF2H3
EIF2B1
TBRG4
DCAF8
COA8
BAG5
PTOV1
DPH5
PSMB6
PEX10
JOSD2
NCOA5
C12orf57
RANBP2
RBBP5
RRM1
STXBP4
COX11
METTL25
CCDC59
MTF2
RRNAD1
ISG20L2
BRAF
WASHC5
NSMCE2
ZSWIM7
TTC19
EPRS1
RPLP0
HAUS5
DHX40
COMMD1
CCT4
WFDC3
DNTTIP1
ELP3
SSU72
NUDT9
KPNB1
ZNF330
RLF
TUBGCP6
TARS2
RPS7
NDUFA10
CENPE
CCAR2
PMVK
ANAPC5
ANKRD40
SMAD7
IPO4
FAM98B
TCF4
PKN2
NDUFS7
TMEM259
RALGAPA1
FANCD2
ZDHHC3
EXOSC7
ZNHIT6
TRMT5
SLC38A6
UBB
H4C11
FAM122A
DNAJB4
NUF2
NCAPH2
LMF2
INTS12
GSTCD
ABT1
RPS8
FOXJ3
RAVER1
TTI2
POLR1F
FLCN
H4C12
MIA3
ZNF547
TRAPPC2B
ZC3HC1
LEO1
NUP214
SHF
VPS37B
MRPL44
WASL
C8orf33
ARL6IP1
DLAT
ZNF165
MAN2C1
NBEAL1
GGCX
PEMT
CRLS1
SMG5
DENR
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
RAB35
ADI1
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
FAM220A
TUBD1
RPS6KB1
KHDRBS1
PAGR1
VDAC3
ENTPD6
LUC7L2
PRMT2
POLA2
SDHA
CCDC127
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
NBPF1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
ATP6V0E2
SAMHD1
PPP6R1
CENPBD1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
THAP7
RABIF
DDRGK1
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
HNRNPH1
CHMP7
MRPL54
SPPL2B
LSM7
RAB18
CBX5
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
MYPOP
ZNF12
PREB
HNRNPL
NAGK
TMEM250
IFNAR1
MTHFSD
MIS18A
NDEL1
FMC1
FAM71E1
EMC10
SH3YL1
ACP1
XRCC2
LOC100287896
LIPT2
KDM8
INTS13
FGFR1OP2
SUMF2
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
RCBTB2
FAM200B
MAP2K7
PPP1CB
RRP1
YEATS4
NOB1
C1orf74
SOD2
CDC7
PPP2CA
MRPS18C
HELQ
PTPN4
MOK
TMED4
SELENOI
ADGRF3
SLX4
MAP2K2
FADD
MRPL45
LOC100289561
NELFCD
TMEM141
RPL36
PTK2
HINT1
WDR4
LAMP1
CHD1
SAFB
SAFB2
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
USP21
NPM1
MTCH2
POLR2J3
RBM17
FUT8
NANP
RTL10
GNB1L
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
SGTA
HASPIN
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
MRPL24
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP1
THOC3
CCNQ
DHDDS
SARS1
CASP2
ASNSD1
ASDURF
GATD3B
GATD3A
SRRM1
DYNC2I1
INTS7
DTL
CRB1
POM121
ACAT2
BLOC1S4
TAX1BP3
EMC6
APBA3
FBXO31
CAPZA2
TMEM209
GDF5
CEP250
PARK7
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
RAD23A
AP3B1
NAPG
GRB2
MRS2
C6orf136
TASOR2
PBLD
TBC1D5
FBRS
SPDL1
PDXDC1
WDR13
DYRK1B
RNF149
MAP1LC3B
CISD1
TIGD1
EIF4E2
SHBG
FXR2
CDC34
USP10
SEC22C
NDUFA8
MORN5
EPS15L1
XPO7
RBAK-RBAKDN
RBAK
CDC5L
STS
PUDP
PAPSS1
ZMYM4
SCAF11
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
TMEM70
PRELID3B
SLC39A7
RXRB
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
EIF5A
WDR18
USO1
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
TFB2M
CNST
U2AF2
DCAF6
MTG1
TMEM104
NAT9
CYCS
ESRRA
UROS
BCCIP
SYS1
HBS1L
MYL5
ATP5ME
C5orf24
MPC2
SLC25A11
RNF167
TMEM63B
MRPL14
STYXL1
MDH2
TMEM43
CHCHD4
UTP18
MBTD1
MORF4L1
C15orf40
DFFB
CEP104
SRCAP
LOC730183
CBWD5
DSN1
TIGD6
HMGXB3
RBM39
EID1
CCDC93
SCAND1
MKNK2
MINK1
WDR43
TENT4A
TMEM63A
MAPKAP1
NUDCD2
HMMR
PPP2R3B
GZF1
CBWD3
POP7
PUM2
MRNIP
GID8
DIDO1
POLR2J2
ALG8
AURKAIP1
GOLGA1
CHMP2A
CELSR3
RPL8
NBPF3
SMIM27
NR1D1
MAPKAPK5
FIP1L1
SKA3
MRPL57
NOP14
GRK4
RPL10A
POLR2J
MRPL21
IGHMBP2
PARP6
AHCTF1
MARCHF7
CBWD6
TMX1
TIA1
CCT8
DLGAP4
PUF60
ING1
CIAO3
PRDM4
PIAS4
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
ZZZ3
PTBP1
TIPIN
COPB2
ZNF286A
GPBP1
PCGF1
PRKDC
MCM4
PPP4R3B
RPL12
LRSAM1
BTBD10
MBD1
CCNC
ZNF248
TTC32
RFX1
UPF1
C8orf37
DCP1A
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
C6orf89
XPC
LSM3
WWOX
WWP1
RPS29
WRNIP1
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
CNOT4
RPS19
SF3A3
LTV1
KIF22
RPS11
NAPB
RPRD2
TUBGCP5
CAPN7
MAD1L1
PFKFB4
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
NAT10
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
PCBP1
NFXL1
CDK12
EIF2S2
DHX9
ANO10
ABHD5
RPS6
PSMD5
SRRT
NRF1
RAD23B
UBE2D3
SLC15A4
SEH1L
SBNO1
SRSF11
INO80C
POFUT2
ARF4
ZNF692
NDUFA11
SNX5
MGME1
NOL11
ABHD10
SCAMP5
STX16
DNMT1
METTL22
FZR1
ZBTB2
C11orf80
PRPF39
XKR7
NCOA4
COQ9
CIAPIN1
UIMC1
EHD1
APOLD1
SUPT5H
SPG7
HSPA4
GEMIN7
TMX3
CCDC102B
ZC3H14
CENPS-CORT
CENPS
EIF2S1
ATP6V1D
POLRMT
CEP350
ERGIC2
VPS13C
ANKFY1
IQCC
ECHS1
VMP1
PTRH2
VMAC
QRICH1
SPEN
SLC30A5
CCSER2
NUP62
IL4I1
ATF5
DLD
TMED3
YIPF2
TIMM29
ZNF473
VRK3
CD320
PPA1
UQCR11
PHF23
KCTD13
ASXL1
MRRF
ELP6
ZNF182
SPACA5
TMEM109
COPS3
CBLL1
COASY
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
SREBF1
PCIF1
ZNF652
STX1A
NKTR
NAA35
GPATCH3
IPMK
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
NAA38
CYB5D1
PAPOLA
CLIP4
ARF3
KATNIP
GTF3C1
THAP12
GVQW3
UNG
TRAM1
SPAST
DUS2
DDX28
CARNMT1
CAND1
PGP
NOL7
RPS28
NDUFA7
CSDE1
RAB33B
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
SPECC1L
TAOK2
MATR3
AIP
DHX34
SRP19
MTHFD1
IPO11
WDR73
ACAD9
COX18
SF1
HEXIM1
SMG7
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
APC
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
ERCC6
UHRF2
RFXANK
BORCS8-MEF2B
BORCS8
SNX25
CFAP97
EIF4A3
ZSCAN22
GAS8
CLN5
ARMC2
FSIP1
COX6A1
APTX
CNP
SEC14L1
PDCD6IP
CCNI
TMEM101
LIG4
UGGT2
TMEM120B
GOPC
YIPF3
POLR1C
TBCCD1
ZBTB21
PGAM1
LRPAP1
TERF2IP
KARS1
MMAA
ETFA
RBM7
C11orf71
MARS2
LAGE3
EED
WASHC2C
UQCC1
TSPAN10
NPLOC4
CEP20
FAM135A
CHAF1A
DARS1
POLDIP3
BTF3
SCML1
PURA
SNRPD1
PLEKHA8
MYO9B
HAUS8
TATDN3
NSL1
RPL27A
MPHOSPH6
PAXBP1
MAP3K7
EXOSC10
ZMYM1
DNTTIP2
MED23
RGPD2
RGPD1
GFPT1
TBK1
IREB2
SLC35A4
APBB3
CIPC
PPP5C
S100A13
CHTOP
SHPRH
PTCD3
POLR1A
NFYC
TAB3
LPXN
NDUFS3
KBTBD4
RPL17-C18orf32
RPL17
ATP6V1C1
STRIP1
SELENOT
MBD3
CC2D1B
MSRA
DBR1
VARS2
FAM227A
CBY1
SNRPC
GPAA1
EIF5
IBA57
DDX19A
ANGEL2
TTLL9
RSPH3
ZKSCAN2
ATP6V1G1
PAIP2
PSMA2
SRPRB
MMS22L
CLASP1
PPAT
PAICS
FAM76A
EID2
ARRDC3
GABPB1
CYRIB
DNA2
PTTG1IP
GAA
NDUFA6
HTR5A
UPF2
MRPL40
HIRA
CEP295
PPM1G
GTPBP10
GOLM2
ZNF747
TRPM7
HMGB1
RPS15
USPL1
DHX37
CCNL1
FKBP1A
CCDC150
UBN2
MDH1B
FASTKD2
ALAS1
SPC24
TRNAU1AP
SEC62
RBBP7
ERLIN2
SDF4
PUSL1
B3GALT6
ACAP3
ITGB3BP
EFCAB7
SLC12A2
RBM15
CNTROB
SEC61G
MRPS7
MBTPS1
GGA3
PWP1
TIMM13
TRIM46
KRTCAP2
PMS1
ORMDL1
GPATCH8
TTC37
TMED9
ARSK
ZHX3
RCC1
GMPPA
DDX42
CCDC47
C16orf91
TMEM127
CIAO1
DNAJB12
RAPGEF6
AARSD1
MED4
MEAF6
DNAJC25-GNG10
DNAJC25
CFAP70
PVR
RPP14
HTD2
MLH3
SUGP1
MAU2
EIF3K
CCDC77
SPATS2
SPDYE14
SPDYE10P
EFHC1
GDI2
DTX2
BMS1
MRPL17
GRWD1
ADAM10
ZBTB45
MAST2
NADK
CCNT1
ARF1
WDR77
ATP5PB
PMS2
AIMP2
MST1
C2orf74
KIN
ATP5F1C
MED1
POLR3B
IFT172