ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MTRNR2L8
MTRNR2L9
GPAM
PEMT
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
ZSWIM7
TTC19
C12orf73
NDUFS7
LAMP1
GEMIN7
RRP1
PCBP1
AMDHD2
TRIAP1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
NOP56
WASHC2C
CIAO3
UTP25
TMEM222
GGCX
POLR1F
CNOT6
COPS3
COMMD1
CCT4
EPRS1
FLCN
AKAP10
HAUS5
GTF2H3
EIF2B1
RGPD2
RGPD1
ZMPSTE24
SLC39A3
WASHC2A
PMP22
ANKRD40
PCID2
CUL4A
GCN1
ADORA2B
TBL3
ITGB3BP
EFCAB7
DLST
TRMT61B
MAGOH
GET4
DENR
SRRD
HPS4
RBM42
TVP23B
ABT1
SPRYD4
ARSG
SLC16A6
ADPGK
RBBP5
EIF2D
JOSD2
ATXN1L
PIGL
RASD1
G6PC3
RLF
FBXW8
MARCHF8
FRA10AC1
RNF166
CTU2
PRKAR1B
EED
CCNL1
TACO1
MPHOSPH10
MCEE
DPH5
MPRIP
GARS1
RAD54L2
SEC31A
THAP9
LANCL2
C8orf33
BAX
MRPL15
OTUD7B
CWC25
MRPL44
RPS16
CENPV
NOXA1
B4GALT7
LRRC37A3
SNRPD1
FAM227B
DTWD1
PURB
GID4
ATPAF2
MANBAL
MTF2
DHX33
NT5M
CLN6
GPSM3
ACSF3
SF3A3
CPSF1
IARS1
RANBP2
NDUFA10
LRRC59
NOP9
DHRS1
TOP3B
TTC4
PLEKHM3
AKIRIN1
MDN1
DPY19L4
ZNF770
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NUP54
DNAJC9
COX10
RBM39
GTF2H2C_2
GTF2H2C
MRPL16
C2CD2
PLD6
CCDC57
TVP23C
PEX3
ADAT2
GNPDA1
FKTN
GLRX5
RPL6
PTPN11
NUF2
MAGOHB
TSR3
GNPTG
TMEM41A
YBX1
MRPL3
SUPV3L1
DDX1
AHCY
UBB
C1orf74
MRPS18C
HELQ
SLC31A1
FKBP15
ZSCAN22
TBC1D13
UBA1
CYCS
BTBD10
NMNAT1
LZIC
DGKZ
DCAF8
PMS2
AIMP2
POR
SRM
MYO9B
HAUS8
SLC25A33
PSMF1
UTP4
DERPC
CHTF8
PINX1
TRIP4
CAD
SEC13
NFAT5
RAD50
DDX5
CEP95
DUS2
DDX28
TIMM23
NFE2L2
CRLS1
MED23
METTL25
CCDC59
INTS12
GSTCD
SUMF2
GTF2H2
MKRN2
MRPL4
SLC39A13
PGAM5
FAM98B
MRPL55
NUDT9
ATPAF1
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
C10orf95
STK10
LSG1
SSU72
CLCN7
WDHD1
SOCS4
FAAP100
PARK7
TFDP1
SAR1B
YAE1
PEBP1
SAMD13
NOC4L
DDX51
TATDN3
NSL1
TBL1XR1
GOSR2
CALM1
GPHN
CHAF1A
DCP1A
DRAM2
CEPT1
FAM156A
FAM156B
NEURL4
SLC25A40
DBF4
PSMG3
SMYD4
RPA1
CYREN
ZNF18
AP5Z1
SPATC1L
NCBP3
CYP20A1
TRIP13
BRD9
CSNK1G2
ZNF639
TRIM25
ZFAND3
TAF4B
TIMM23B
PARG
ZNF286A
PBK
PPRC1
OAZ3
USP15
DNAJC11
VSIG10
PDS5A
STXBP4
COX11
EIF3B
USP32
KMT2D
VPS37B
DHX40
ATRIP
ZNF800
NBPF1
ETV3
CCT8
FUS
INTS13
FGFR1OP2
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
RAB35
ADI1
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
FAM220A
TUBD1
RPS6KB1
KHDRBS1
PAGR1
VDAC3
ENTPD6
LUC7L2
PRMT2
POLA2
SDHA
CCDC127
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
FAM122A
ATP6V0E2
SAMHD1
PPP6R1
CENPBD1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
THAP7
RABIF
DDRGK1
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
HNRNPH1
CHMP7
MRPL54
SPPL2B
LSM7
RAB18
CBX5
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
MYPOP
ZNF12
PREB
HNRNPL
NAGK
TMEM250
IFNAR1
MTHFSD
MIS18A
NDEL1
FMC1
FAM71E1
EMC10
SH3YL1
ACP1
XRCC2
LOC100287896
LIPT2
KDM8
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
RCBTB2
FAM200B
MAP2K7
PPP1CB
YEATS4
NOB1
SOD2
CDC7
PPP2CA
WDR74
PTPN4
MOK
TMED4
SELENOI
ADGRF3
SLX4
MAP2K2
FADD
MRPL45
LOC100289561
NELFCD
TMEM141
RPL36
PTK2
HINT1
WDR4
CHD1
SAFB2
SAFB
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
USP21
NPM1
MTCH2
POLR2J3
RBM17
FUT8
NANP
RTL10
GNB1L
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
SGTA
HASPIN
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
MRPL24
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP1
THOC3
CCNQ
DHDDS
SARS1
CASP2
NUP214
ASNSD1
ASDURF
GATD3B
GATD3A
SRRM1
DYNC2I1
INTS7
DTL
CRB1
POM121
ACAT2
BLOC1S4
TAX1BP3
EMC6
APBA3
FBXO31
CAPZA2
TMEM209
GDF5
CEP250
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
RAD23A
AP3B1
NAPG
GRB2
MRS2
C6orf136
TASOR2
PBLD
TBC1D5
FBRS
SPDL1
PDXDC1
WDR13
DYRK1B
ERCC6L2
RNF149
MAP1LC3B
CISD1
TIGD1
EIF4E2
SHBG
FXR2
CDC34
USP10
SEC22C
NDUFA8
MORN5
EPS15L1
XPO7
RBAK-RBAKDN
RBAK
CDC5L
STS
PUDP
PAPSS1
ZMYM4
SCAF11
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
TMEM70
PRELID3B
SLC39A7
RXRB
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
EIF5A
WDR18
USO1
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
RPS7
TFB2M
CNST
U2AF2
DCAF6
MTG1
TMEM104
NAT9
ESRRA
UROS
BCCIP
SYS1
HBS1L
MYL5
ATP5ME
C5orf24
MPC2
SLC25A11
RNF167
TMEM63B
MRPL14
STYXL1
MDH2
TMEM43
CHCHD4
UTP18
MBTD1
MORF4L1
C15orf40
DFFB
CEP104
SRCAP
LOC730183
CBWD5
DSN1
TIGD6
HMGXB3
EID1
CCDC93
SCAND1
MKNK2
MINK1
WDR43
TENT4A
TMEM63A
MRM3
GLOD4
MAPKAP1
NUDCD2
HMMR
PPP2R3B
GZF1
CBWD3
POP7
PUM2
MRNIP
GID8
DIDO1
POLR2J2
ALG8
AURKAIP1
GOLGA1
CHMP2A
CELSR3
RPL8
NBPF3
SMIM27
NR1D1
MAPKAPK5
FIP1L1
SKA3
MRPL57
NOP14
GRK4
POLR2J
PARP6
AHCTF1
MARCHF7
CBWD6
TMX1
TIA1
DLGAP4
PUF60
ING1
PRDM4
PIAS4
AASDH
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
ZZZ3
PTBP1
TIPIN
COPB2
GPBP1
PCGF1
PRKDC
MCM4
PPP4R3B
RPL12
LRSAM1
MBD1
CCNC
ZNF248
TTC32
RFX1
UPF1
C8orf37
NUP153
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
C6orf89
XPC
LSM3
WWOX
WWP1
RPS29
WRNIP1
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
CNOT4
RPS19
LTV1
KIF22
RPS11
NAPB
RPRD2
TUBGCP5
CAPN7
MAD1L1
PFKFB4
PSMB2
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
NAT10
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
NFXL1
CDK12
EIF2S2
DHX9
ANO10
ABHD5
RPS6
PSMD5
SRRT
NRF1
AP2B1
RAD23B
UBE2D3
SLC15A4
SEH1L
SBNO1
SRSF11
INO80C
POFUT2
ARF4
SMG5
ZNF692
NDUFA11
SNX5
MGME1
NOL11
ABHD10
SCAMP5
STX16
DNMT1
METTL22
FZR1
ZBTB2
C11orf80
PRPF39
XKR7
NCOA4
COQ9
CIAPIN1
UIMC1
EHD1
APOLD1
SUPT5H
SPG7
HSPA4
TMX3
CCDC102B
ZC3H14
CENPS-CORT
CENPS
EIF2S1
ATP6V1D
POLRMT
CEP350
ERGIC2
VPS13C
ANKFY1
IQCC
ECHS1
VMP1
PTRH2
VMAC
QRICH1
SPEN
SLC30A5
CCSER2
NUP62
IL4I1
ATF5
DLD
TMED3
YIPF2
TIMM29
ZNF473
VRK3
CD320
PPA1
UQCR11
PHF23
KCTD13
ASXL1
MRRF
ELP6
ZNF182
SPACA5
TMEM109
CBLL1
COASY
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
SREBF1
PCIF1
ZNF652
STX1A
NKTR
NAA35
GPATCH3
IPMK
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
NAA38
CYB5D1
PAPOLA
CLIP4
ARF3
KATNIP
GTF3C1
THAP12
GVQW3
UNG
TRAM1
SPAST
CARNMT1
CAND1
PGP
NOL7
FANCD2
RPS28
NDUFA7
CSDE1
RAB33B
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
SPECC1L
TAOK2
MATR3
AIP
DHX34
SRP19
MTHFD1
IPO11
WDR73
ACAD9
COX18
SF1
HEXIM1
SMG7
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
APC
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
ERCC6
UHRF2
RFXANK
BORCS8-MEF2B
BORCS8
EIF4A3
GAS8
CLN5
FAM149B1
ECD
ARMC2
FSIP1
COX6A1
APTX
CNP
SEC14L1
PDCD6IP
CCNI
TMEM101
LIG4
UGGT2
TMEM120B
GOPC
YIPF3
POLR1C
TBCCD1
ZBTB21
PGAM1
LRPAP1
TERF2IP
KARS1
MMAA
ETFA
RBM7
C11orf71
MARS2
LAGE3
UQCC1
TSPAN10
NPLOC4
CEP20
FAM135A
DARS1
POLDIP3
BTF3
SCML1
PURA
PLEKHA8
RPL27A
MPHOSPH6
PAXBP1
MAP3K7
EXOSC10
ZMYM1
DNTTIP2
GFPT1
TBK1
IREB2
SLC35A4
APBB3
CIPC
PPP5C
S100A13
CHTOP
SHPRH
PTCD3
POLR1A
NFYC
TAB3
LPXN
NDUFS3
KBTBD4
RPL17-C18orf32
RPL17
ATP6V1C1
STRIP1
SELENOT
MBD3
CC2D1B
MSRA
DBR1
VARS2
FAM227A
CBY1
SNRPC
GPAA1
EIF5