ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567327 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◣ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
USP31
RAD51AP2
METTL3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCDC88A
GFM2
HSPE1-MOB4
HSPE1
HSPD1
GTF2H4
CCDC200
C7orf25
CRH
LSM6
MRPL48
DARS2
CENPL
LCORL
EIF2D
TANK
MED23
MAIP1
MRPL28
YIPF5
KCTD16
MRPS30
NOTCH2
ATE1
DLAT
ITGB3BP
EFCAB7
ATL1
NBPF1
EFHD1
COX18
EID1
PLK4
KCNJ2
RNPC3
FANCF
LYNX1-SLURP2
LYNX1
TTC21B
STK17A
TMEM71
PHF20L1
NUDT4B
NUDT4
NBN
PHF3
PIP4P2
NFE2L2
VRK2
TMA16
CLN3
MTRNR2L8
SAXO1
RRAGA
PHIP
MRPL42
RPGRIP1L
FTO
MFAP3
FAM114A2
AGBL3
MTIF3
ABCD3
FRA10AC1
NBPF15
WDR35
DTWD2
AFF1
USP30
POLR2M
SPEF2
LRRC46
IKZF2
CMTM6
COG6
LDHB
C8orf88
CEP85L
FEM1C
ZNF250
LCA5
KRR1
MTF2
NSFL1C
AP3B2
CC2D2B
SCOC
BBS10
DCP1A
PDCD2
CAP2
WDPCP
MDH1
PFKM
ATR
ANAPC10
ABCE1
H4C12
IL18R1
GINS3
CCDC178
GPR89A
MPHOSPH6
SPATA17
GPATCH2
GK5
SELENOT
SLC30A9
FOXO3B
ZNF214
NLRP14
COBLL1
BLOC1S6
ORC4
MBD5
DNAH2
UFL1
DBR1
SULT6B1
ZNF891
ZNF10
CTR9
SNRPD1
CDK8
C12orf66
CETN3
BET1
CNOT4
TPR
ODR4
SUGCT
MPLKIP
PTX3
ACER3
LAMA2
ZNF32
PDCD6IP
CLDN12
SOAT1
SLC39A10
UFM1
WDR11
GAP43
NRAS
ZNF780A
WDR3
GDAP2
DHRS7
DERL1
SNRPF
ZCCHC7
TMEM106B
SNX16
DECR1
GPC6
DSCC1
FAM227B
DTWD1
USP15
DOP1A
GNPDA2
TNPO1
FAM126A
RICTOR
PCBP2
RPSA
CSTF2T
SLC25A40
DBF4
TSN
TMEM143
SYNGR4
ASCC3
TMEM260
NAE1
DHX36
METTL25
CCDC59
MRPL39
CCT2
USP45
FEM1A
VPS45
SUPT7L
SLC4A1AP
BCAP29
RNF146
ZNF93
DNAJC3
PINX1
KBTBD8
IFTAP
KDM8
REL
FBXW4
HLCS
PAXBP1
GHR
CREBZF
VWA8
C21orf91
CDKN2B
DEPDC1B
MRPS28
WDR31
HEMK1
ZSCAN25
GUCY1A1
IRAK1BP1
KIFAP3
PUS10
PEX13
GLIPR1L2
ARHGAP28
HEPACAM2
MRPL44
ZNF670
INVS
ERP44
ZSWIM2
ARL6
VPS50
AHCTF1
GTF2B
GNAL
PDGFD
TAP2
MPHOSPH10
MCEE
RBIS
DENND1B
TMEM43
CHCHD4
NT5DC1
HENMT1
RTRAF
BAZ2B
ZNF91
SNX15
FNTB
RFT1
VPS41
KDM5A
CCDC77
PPIP5K2
ZMPSTE24
TMED7-TICAM2
TMED7
TANC2
LAMTOR3
NCOA7
RNF150
C2orf69
RBM45
STX18
C10orf88
GDAP1
LTA4H
TMBIM4
SYT1
IRAK3
RUFY2
PDE4DIP
ZNF675
BLOC1S5
SERPINI1
PDCD10
CBR1
RBBP9
GPR85
HSF2
TMEM38B
ODF2L
RPS15A
GLCE
PCNX4
LRRC57
HAUS2
TTC26
STX7
ATP9B
CHD9
CBWD5
PEMT
CBWD3
USP47
RFC3
DTD2
TRA2B
KLHL20
PRPF18
TCAF1
MXD1
ZCCHC4
AGK
VEZT
FGD6
SRRD
HPS4
PPIC
SCRN3
CIR1
MRPL1
SFR1
ZBTB14
NSUN6
PRPF38B
SMARCA5
ELMOD2
ETFDH
C4orf46
RPS6KC1
ITGA4
UMAD1
ZNF165
CAT
RGS2
TMX1
INTS12
GSTCD
HMGB1
SPRED1
GUF1
TOX4
RAB2B
CTH
USPL1
ZNF510
TRIQK
DDX60
SEMA3A
C8orf37
NUP54
STEAP1B
H1-3
MPP5
MTFR1
C18orf21
SCYL2
RAB27B
DEPDC4
TBCK
AIMP1
COPB1
KATNBL1
ZNF695
SNX12
FH
FAM174A
SENP1
NMI
PSMD14
COX7C
GHITM
RAB11FIP2
PREP
RC3H1
B3GALT1
RAP1GDS1
RANBP17
ACYP2
NKAIN2
SVIP
RPS7
ALG10
RAB3C
TMLHE
SPRY3
GATB
CDCA7
ZFP1
FAM217B
CENPC
SYCP2
HSCB
CHEK2
TMED5
CCDC18
KPNA5
POP7
TMEM242
RSPH4A
SLC25A36
MAP9
ZNF614
METTL16
TRIM16L
TWF1
ZBTB20
CXCL2
WDR87
SIPA1L3
HMGB2
SLC25A26
C5orf51
CCNC
SLC9B2
ZNF736
IFT74
IFNAR1
ATP10D
PTCD2
MRPS27
ZNF205
ALKBH8
WBP11
C12orf60
SESN1
PRRC2B
ZNF326
PLPP1
CUL2
CNOT2
ZNF92
ANKRD46
ZNF518A
NEK1
WDHD1
SOCS4
SS18
NCOA4
GLYATL1
USP32
FAM110B
USP16
ZNF76
SH3GLB1
MTMR6
PCSK5
TEFM
CGRRF1
WDR36
RAB8B
RBM8A
HEATR5B
GPATCH11
ZKSCAN7
SRI
SUCLG2
ZNF782
EXOC5
AP5M1
COQ3
NET1
ZFC3H1
THAP2
SLF1
KIAA0825
VCPIP1
C8orf44-SGK3
LDB2
EIF5A2
USP38
EEF1AKMT1
SCLT1
C4orf33
POLR3E
VTA1
NMBR
PGBD1
APOL2
CDK5RAP2
ACVR2A
PDIK1L
SWAP70
UAP1
GTPBP10
COMMD10
RMDN1
TSPAN12
ZNF343
BIRC2
ZNF649
BTBD10
ULBP1
TCTEX1D1
ZNF491
MED30
ZNF74
CPNE3
SLFN11
AKAP12
TMTC1
SP3
ZNF391
TTC30A
TUBGCP3
SNRPD3
GUCD1
HSD17B4
BMT2
CBWD6
RPS4X
GNG11
NPM1
ADAMTS3
TUBE1
FAM229B
CCNA2
ZNF624
TMTC3
LRPAP1
CEP290
ZNF780B
CHD8
MBIP
CEP128
BZW1
UBE2E2
TMEM248
RABGAP1L
ERICH2
PIGN
PEX3
ADAT2
C1orf56
ZW10
ZNF227
CEP83
KCNK12
GOLM2
ZNF709
GPN3
FAM216A
PNISR
BCL9
ZNF322
PRRC2C
CLCN3
ITGAV
SENP6
PRKCQ
TUSC1
MKRN2
PLEKHA5
MPPE1
XPR1
SARAF
CAND1
ZNF43
EPHA3
NAP1L1
NUP35
SPATA13
TMEM168
OCIAD1
ZNF300
PBLD
HNRNPH3
SPNS1
TMCO4
MKLN1
PELO
ITGA1
PGM2L1
TNPO3
ZSCAN12
ZNF330
GFM1
OTUD6B
ZNF17
MRPL16
GTF2H2
RBBP5
SLC30A1
ANKRD36
RPL7
RDH10
ZC3H14
PSMA1
GOT2
RNF7
THBS4
MTX3
TNKS
RBM12B
TOMM5
ZFYVE16
C2orf73
CEP57L1
ZNF471
NANS
SIKE1
RPL21
REXO5
ERI2
THAP5
DNAJB9
INTS10
CFTR
ZNF470
GOSR1
TFPT
PRPF31
MTRNR2L2
MTHFD2L
KPNA1
PLEKHA8
KCNH1
RNF19B
FBH1
ANKRD16
AADAT
COG3
RPL27A
PTDSS1
MTERF3
ZNF451
HEXA
GLUL
FIS1
PCCA
USP40
LHFPL6
GRIK2
THSD7A
SNX2
SRGAP1
WAC
CUL5
SLC2A12
TFAM
ASNS
LUC7L2
FMC1-LUC7L2
NAA16
MTRF1
ZNF25
GPR37
FMC1
GORAB
TIMMDC1
GCFC2
NDUFS3
KBTBD4
NCEH1
ATF7IP
AQR
TMCO1
DNAJC24
DCDC1
ZNF45
MTIF2
TRAK2
STRADB
SLC25A24
PDCD5
CASD1
HIF1A
METAP1D
THAP9
SEC31A
SEH1L
FAM214A
ETNK1
SLC25A27
CYP39A1
MTRR
MTMR2
FASTKD3
DEPDC1
QTRT2
CCDC191
RMDN2
DZIP3
CIP2A
WDR61
NDUFAF2
ERCC8
NPRL3
RPUSD4
FAM118B
ZNF37A
ALKBH3
ZSCAN5A
PRPF8
CRISPLD1
ZNF121
MCU
ANKRD36B
PTBP2
PHACTR2
ADGRL1
SOX5
FAIM
AGGF1
CCDC93
STX17
SLC25A21
CFAP299
FBXW7
RWDD1
CPLX2
KANSL2
SC5D
GUCY1B1
CHAC2
TANGO6
C14orf39
HERC4
CMSS1
PIMREG
CACNB2
C2orf42
SYT7
TMX4
TRPS1
TLK1
HECTD1
UBE2D1
SKP1
PHF10
MINPP1
LRRC6
H2BU1
H2AW
DNAH14
ZNF708
KITLG
COA6
COMMD8
IL15
NUP58
PPWD1
CENPK
RAET1G
CRB1
FARSB
CRYM
MSRA
ST7
H2AZ2
MIA3
MAP3K1
CAPRIN2
PGM1
MANEA
PDE3B
CYP51A1
THUMPD1
LRP2BP
ANKRD37
ZNF714
CCDC66
NHLRC2
DCLRE1A
LIN7A
CCDC83
MMUT
CENPQ
ZNF35
CFAP69
MMS22L
ZSCAN22
TASP1
NHSL1
RNF135
ELAC1
STX11
NAPEPLD
CTNNB1
SSH2
UBQLN1
EDEM3
WASHC4
KLHL7
L3HYPDH
JKAMP
TP53I3
MIS18A
CNTLN
ZFP62
FNIP1
SUCO
DELE1
ACP6
SREK1IP1
CWC27
CEP70
TMEM26
CHIC1
RBM28
HMGN1
RC3H2
SRSF7
LANCL2
AKAP5
ANKRD17
MAPRE2
LOC100289561
RAB28
TADA1
TTC39B
DCAF10
ZNF254
ZNF720
DMXL2
KBTBD7
ICA1L
ACOX3
PIGK
TCHP
PIAS1
UEVLD
NEMF
CFAP20
ZNF202
ZNF222
FASTKD1
PIGU
CALM2
DPP9
PROS1
FBXL4
FAH
TFDP2
IQCH
AAGAB
PPM1L
PSTK
IL12A
ING3
SLC10A7
ADH5
ZCWPW2
SLC25A30
AZI2
LSM10
RSL24D1
ZNF628
IFI27L2
SPICE1
ZNF354C
TMEM217
TBC1D22B
PAFAH2
LRRD1
RFX5
FAM222B
CCSER2
POGLUT3
ITPR2
ANK2
TMOD3
PRMT6
ORC2
RNF141
ZNF253
IFRD1
SMAP2
TSGA10
C2orf15
DNAJC19
PALLD
LXN
ATF2
PPP1R42
MICU2
WDR12
SKAP2
NUF2
CARF
ZKSCAN8
ATL2
TECPR2
CINP
GRAMD1C
DLC1
PHTF1
TMEM17
TUSC3
CEP97
AASS
PCOTH
MIPEP
EXOSC3
ERO1B
NRDE2
ALDH7A1
UTP15
ANKRA2
ZSCAN31
DYNC1I2
ZC3H15
CAMLG
NRXN3
TRMT1L
SWT1
CASP6
NUP205
ABR
RAD52
ZNF239
FAM162A
CCDC58
ERV3-1-ZNF117
ERV3-1
HMGN3
ZNF441
PDE12
CEP55
RPL32
ANAPC5
JMJD7-PLA2G4B
JMJD7
ZBTB26
UGDH
STOX2
NCOA3
KANSL1L
SPR
TRPC1
BLMH
SLC36A4
SERF1B
SERF1A
RGPD8
RGPD5
IGSF11
FAM135A
CNNM2
MTX2
RNF182
SPAG16
MRPL19
ACAT1
SCN3B
ASH2L
MRPS15
NDUFB4
SLC35B1
NHEJ1
PIH1D2
NKAPD1
RNF111
COL25A1
YAE1
RPL37
JMJD1C
RGL1
RBM26
CNOT6L
PCDH9
ATXN7L2
PTPN14
TDRP
SMNDC1
SMPD3
RNLS
SSPN
ADSS2
EPB41L5
ARPC5
VPS39
RPS6
TNIK
RIF1
TAP1
PSMB9
ICE2
ZNF654
CGGBP1
PRCP
TRAPPC4
RPS25
ANTXR2
NPL
MINDY4
EIF1B
CFAP298-TCP10L
CFAP298
ZNF24
SLC37A3
DDIAS
STPG2
PKIB
ZMYM1
C1orf53
BMPR1B
GCA
MIER1
MSRB3
PDXDC1
PSMG2
ZDHHC20
SRSF6
WASF1
NEGR1
CDC40
CCN3
ERMARD
KBTBD3
AASDHPPT