ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3585704 | Lung fibroblasts
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◣ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
USP31
RAD51AP2
METTL3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CCDC88A
GFM2
MTRNR2L8
HSPE1-MOB4
HSPE1
HSPD1
GTF2H4
CRH
CCDC200
MRPL28
C7orf25
LSM6
LCORL
DLAT
MRPL48
DARS2
CENPL
YIPF5
KCTD16
NOTCH2
TANK
EIF2D
MED23
MAIP1
NBPF1
MRPS30
LYNX1-SLURP2
LYNX1
ATE1
FANCF
EID1
PLK4
ITGB3BP
EFCAB7
ATL1
EFHD1
COX18
KCNJ2
NBN
RNPC3
NUDT4B
NUDT4
VRK2
TTC21B
STK17A
TMEM71
PHF20L1
SAXO1
RRAGA
PHF3
TMA16
NFE2L2
PIP4P2
CLN3
MRPL42
AGBL3
PHIP
LDHB
SPEF2
RPGRIP1L
FTO
BBS10
DTWD2
ABCD3
MFAP3
FAM114A2
MTIF3
CEP85L
FRA10AC1
IL18R1
COG6
CAP2
POLR2M
WDR35
USP30
ANAPC10
ABCE1
CMTM6
IKZF2
AP3B2
C8orf88
SCOC
FEM1C
LCA5
NBPF3
NSFL1C
AFF1
GINS3
ATR
ZNF250
KRR1
ORC4
MBD5
CDK8
LRRC46
CC2D2B
GPR89A
WDPCP
MDH1
PFKM
FOXO3B
PDCD2
MPHOSPH6
ZNF891
ZNF10
GK5
MTF2
DBR1
WDR3
GDAP2
ZNF32
SELENOT
CCDC178
BET1
DCP1A
CBWD5
CBWD3
SLC30A9
ZNF214
NLRP14
COBLL1
SNRPD1
SPATA17
GPATCH2
CTR9
DNAH2
UFL1
SULT6B1
CNOT4
FAM227B
DTWD1
DERL1
WDR11
CETN3
DECR1
SLC25A40
DBF4
BLOC1S6
PTX3
LAMA2
UFM1
C12orf66
TPR
ODR4
DHX36
SUGCT
MPLKIP
CLDN12
ACER3
FAM126A
SOAT1
GAP43
FBXW4
NRAS
DOP1A
DHRS7
PCBP2
PDCD6IP
SNRPF
SLC39A10
TMEM106B
NBPF15
GPC6
MRPS28
TCAF1
H4C11
TMEM143
SYNGR4
ZNF780A
USP15
MTRNR2L2
RICTOR
SNX16
TSN
C10orf88
DSCC1
TMEM260
GNPDA2
TNPO1
METTL25
CCDC59
FEM1A
ASCC3
CSTF2T
VPS45
SUPT7L
SLC4A1AP
KDM8
RBIS
STX18
CCT2
RPSA
PRPF18
WDR31
RNF146
TWF1
NAE1
GHR
ZNF93
DNAJC3
PINX1
ZNF670
IFTAP
BCAP29
TMED7-TICAM2
TMED7
GUCY1A1
RNF150
USP45
CDKN2B
HEMK1
PUS10
PEX13
ARHGAP28
HLCS
NCOA7
AHCTF1
REL
C8orf37
MRPL39
IRAK1BP1
MPHOSPH10
MCEE
ZCCHC7
GLCE
HENMT1
CREBZF
GTF2B
KBTBD8
KIFAP3
DEPDC1B
INVS
ERP44
ZSWIM2
GLIPR1L2
PCNX4
PDE4DIP
C21orf91
MRPL44
CBWD6
VPS41
ARL6
ANKRD36B
VWA8
PRPF38B
PDGFD
SNX15
ZSCAN25
RFT1
MRPL1
DENND1B
TMEM43
CHCHD4
GNAL
C2orf69
RTRAF
BAZ2B
HEPACAM2
UMAD1
MTFR1
FNTB
VPS50
RBBP9
TMX1
NPM1
ANKRD36C
NT5DC1
GDAP1
TAP2
KLHL20
ZMPSTE24
ALG10
TANC2
RUFY2
ZNF675
ZNF91
ZNF165
PPIP5K2
CBR1
TMBIM4
SYT1
LRRC57
HAUS2
ZNF510
RAB3C
MAP9
TMEM38B
RBM45
LTA4H
ODF2L
SERPINI1
PDCD10
RPS15A
MXD1
ATP10D
STX7
IRAK3
RC3H1
HSF2
LAMTOR3
HMGB2
BLOC1S5
TMEM242
KATNBL1
B3GALT1
ZNF695
PEMT
TTC30A
USP47
POP7
KDM5A
CCDC77
TRIQK
PAXBP1
AGK
WDR87
SIPA1L3
SRRD
HPS4
NSUN6
PPIC
SCRN3
CIR1
SFR1
INTS12
GSTCD
DDX60
SESN1
ATP9B
VEZT
FGD6
CHD9
SS18
SMARCA5
ELMOD2
ITGA4
CAT
TRA2B
RGS2
C18orf21
TTC26
ZCCHC4
USP32
SCLT1
C4orf33
CHAMP1
ZBTB14
SPRED1
FAM174A
RPS6KC1
SLF1
KIAA0825
TOX4
RAB2B
CTH
SLC25A36
SCYL2
RAB27B
DEPDC4
PSMD14
NEK1
HMGB1
NUP54
HSCB
CHEK2
ZNF43
SENP1
USPL1
TBCK
AIMP1
PTCD2
MRPS27
RBM8A
FH
ZNF391
GUF1
ETFDH
C4orf46
RFC3
H1-3
VCPIP1
C8orf44-SGK3
COPB1
COX7C
BIRC2
RAB11FIP2
PREP
RAP1GDS1
ZFP1
NKAIN2
UAP1
SVIP
TMED5
CCDC18
MPP5
RSPH4A
IFNAR1
TMLHE
SPRY3
GATB
ZNF205
ALKBH8
ZNF709
TUSC1
ACYP2
SLC25A26
FAM217B
TEFM
CENPC
SYCP2
C5orf51
WDR36
DTD2
IFT74
GHITM
TMTC1
CDCA7
SWAP70
CGRRF1
THBS4
MTX3
TUBE1
FAM229B
CNOT2
ANKRD46
NMI
ZNF614
WBP11
C12orf60
POLR3E
ZNF649
GPN3
FAM216A
ZNF330
GFM1
RABL3
GTF2E1
ZBTB20
RANBP17
ZNF326
PLPP1
CUL2
PCSK5
CCNC
SLC9B2
RPS7
ZNF736
ZNF518A
GLYATL1
BTBD10
PNISR
BZW1
MPPE1
MTMR6
PGM2L1
ZFC3H1
THAP2
KANSL2
ZNF227
TSPAN12
ZNF286A
SEMA3A
WDHD1
SOCS4
VTA1
NMBR
BCL9
OTUD6B
NPRL3
ZNF76
SENP6
SNX12
SH3GLB1
ZNF782
EXOC5
AP5M1
NET1
ZNF92
NCOA4
EEF1AKMT1
ZNF343
FAM110B
HEATR5B
GPATCH11
PGBD1
APOL2
CHD8
SIKE1
PRRC2B
CUL5
KPNA5
CEP57L1
GNG11
METTL16
USP16
ULBP1
TCTEX1D1
RPL21
REXO5
ERI2
USP40
NACA
ACVR2A
SUCLG2
SLC2A12
GTPBP10
HSD17B4
BMT2
RAB8B
TNPO3
USP38
NUP35
CDK5RAP2
ZNF491
MED30
OCIAD1
TSGA10
C2orf15
AKAP12
PTBP2
WAC
FBH1
ANKRD16
AGGF1
SNRPD3
GUCD1
CAND1
EIF5A2
CEP83
WDR61
GOLM2
C14orf39
ZKSCAN7
ZNF74
ADAMTS3
ZNF322
NCEH1
PRKCQ
SRI
TMEM248
RABGAP1L
TMCO4
STEAP1B
SLC25A27
CYP39A1
COMMD10
GPR37
RMDN1
LDB2
CCNA2
TANGO6
ACOX3
TMTC3
CEP290
RPS4X
NUP58
TMEM168
HERC4
ZNF780B
CPNE3
MBIP
RPUSD4
FAM118B
UBE2E2
PDIK1L
MKRN2
HIF1A
PLEKHA5
MINPP1
TUBGCP3
COG3
COQ3
CHAC2
HEXA
LRPAP1
SLFN11
PRRC2C
ZNF300
PPWD1
CENPK
TMX4
GCSH
ADGRL1
XPR1
ZC3H14
DCAF10
PIGN
TP53I3
MIS18A
EPHA3
ZNF624
NAP1L1
CLCN3
PBLD
HNRNPH3
ZNF17
LIN7A
SREK1IP1
CWC27
ITGAV
PROS1
AKAP5
ERICH2
TTC39B
PELO
ITGA1
GOT2
KLHL7
RNF7
ASNS
RBM12B
PEX3
ADAT2
C1orf56
ZW10
SUCO
ZFYVE16
GORAB
KCNK12
ZNF471
CEP128
MRPL16
GTF2H2
THAP5
DNAJB9
LHFPL6
ATF7IP
AQR
RAET1G
CEP70
DNAJC19
SAXO2
EFL1
MCU
PLEKHA8
SLC30A1
CTNNB1
TLK1
KCNH1
AADAT
TADA1
SARAF
NAA16
MTRF1
ZNF253
C2orf73
SPATA13
NANS
ZSCAN12
SPNS1
INTS10
CFTR
TMCO1
TMEM26
UTP15
ANKRA2
FXR1
MTHFD2L
KPNA1
SRGAP1
ABR
ITPR2
PDCD5
RPL7
RDH10
METAP1D
MKLN1
ANKRD18B
TFAM
L3HYPDH
JKAMP
TNKS
PTDSS1
MTERF3
ING3
RMDN2
GLUL
FIS1
PCCA
NDUFS3
KBTBD4
ZNF470
GRIK2
ZNF37A
ALKBH3
CMSS1
NEMF
ZNF628
THSD7A
TRAK2
STRADB
SNX2
RNF19B
THAP9
SEC31A
SEH1L
TMEM17
PSMA1
ZNF708
ZNF25
DEPDC1
TOMM5
ZNF714
IL15
ACP6
RBBP5
DNAJC24
DCDC1
ZSCAN31
H2AZ2
SLC25A24
RAD52
HECTD1
CASD1
FAM214A
CCDC93
STX17
ETNK1
MTRR
FASTKD3
COA6
GCFC2
GOSR1
ZNF45
ZSCAN5A
CCDC83
PALLD
RPL32
CEP164
CCSER2
ST7
PHACTR2
PHF10
H2BU1
H2AW
MANEA
LUC7L2
FMC1-LUC7L2
MTMR2
CFAP299
RWDD1
CPLX2
GUCY1B1
FMC1
QTRT2
CCDC191
DZIP3
CIP2A
PRPF8
CRISPLD1
PIMREG
CACNB2
MMUT
CENPQ
DYNC1I2
ANAPC5
ELAC1
GRAMD1C
TRPS1
MIA3
SOX5
CAPRIN2
ANKRD17
LOC100289561
DNAH14
MTX2
SLC25A21
KBTBD3
AASDHPPT
ZNF441
CNTLN
RPL27A
FBXW7
KITLG
STAT6
COMMD8
THUMPD1
PIGK
NHLRC2
DCLRE1A
SMAP2
MTIF2
C2orf42
ZNF35
CFAP69
CHIC1
CFAP20
IFI27L2
ZC3H15
CAMLG
JMJD7-PLA2G4B
JMJD7
ZNF24
TNFRSF19
SYT7
MSRA
MAP3K1
GCA
IQSEC3
UBE2D1
SRSF7
SKP1
SRSF6
PDE3B
TIMM23
SC5D
LRP2BP
ANKRD37
CCDC66
DELE1
CRB1
MMS22L
RBM28
LXN
ZNF717
SSH2
EDEM3
WASHC4
LRRC6
ZNF254
KBTBD7
ZFP62
FANCL
CYP51A1
TRAPPC4
RPS25
TCHP
SLC35B1
TRIM16L
FARSB
CRYM
ZSCAN22
TASP1
NHSL1
ZNF202
SPICE1
NUTM2E
SPR
ERAP1
POGLUT3
TECPR2
CINP
STX11
ANKRD36
PDXDC1
PGM1
RAB28
UBQLN1
TFDP2
ZNF720
DMXL2
PPM1L
PSTK
FNIP1
SLC10A7
ADH5
IFRD1
LSM10
ZNF354C
TMEM217
TBC1D22B
ATF2
ANP32E
RNF135
HMGN1
LRRC37A3
DPP9
NAPEPLD
LANCL2
TMOD3
ZNF239
LRFN2
MAPRE2
PRMT6
ORC2
IL12A
ICA1L
ACAT1
ZCWPW2
SLC25A30
AZI2
FIP1L1
PIAS1
CRADD
UEVLD
CEP55
ZNF222
FASTKD1
PPP1R42
MICU2
BMS1
PPP1R12A
HNRNPA3
UBE2T
TFPI2
KANSL1L
SLC9A1
CALM2
RC3H2
DLC1
ABCC5
PTPN14
ADRA2B
FAM135A
SPDYA
FAM162A
CCDC58
IQCH
AAGAB
RPS6
AASS
RNF141
PDE12
EXOSC3
TIMMDC1
YY1AP1
DAP3
ALDH7A1
PIGU
WDR12
SKAP2
NUF2
CARF
NRXN3
NHEJ1
SLC37A3
ERGIC2
TXNL4B
RTTN
DHX38
ANK3
ZSCAN9
ZMYM4
FBXL4
PHTF1
H2BC18
H3C13
NFRKB
ZNF429
WDR77
ATP5PB
CEP97
MRPS15
TBC1D19
NRDE2
TARDBP
RSL24D1
PAFAH2
LRRD1
TRMT1L
SWT1
ZBTB26
UGDH
PIH1D2
NKAPD1
ATL2
NUDT3
RNF103-CHMP3
RMND5A
B3GNT2
UBE2D3
CISD2
PSMG2
CNNM2
TUSC3
ERV3-1-ZNF117
ERV3-1
GTF3C5
ABI1
CEP76
SCN3B
PCOTH
MIPEP
ASH2L
RFX5
ZKSCAN8
CASP6
STOX2
RNF111
COL25A1
USP54
COPS7A
KDM3B
OPN3
CHML
RGL1
TRPC1
GATAD1
RBM26
BLMH
SLC36A4
SURF4
RNF2