ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567327 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◣ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

MAMDC2
DUX4
KMT2A
USP31
RAD51AP2
METTL3
ARL4D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MUC3A
UCKL1
TNFRSF6B
CCDC88A
SNAPC1
GFM2
HSPE1-MOB4
HSPE1
HSPD1
VARS2
GTF2H4
SPAAR
HRCT1
AFAP1
CCDC200
KIF5C
C7orf25
CRH
LSM6
TRIM48
MRPL48
DARS2
CENPL
BTNL9
LCORL
EIF2D
TANK
MED23
MAIP1
MRPL28
KCTD16
YIPF5
MRPS30
FRG2C
NOTCH2
ATE1
DLAT
ITGB3BP
EFCAB7
ATL1
NBPF1
EFHD1
COX18
EID1
PLK4
KCNJ2
RNPC3
FANCF
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
TTC21B
STK17A
TMEM71
PHF20L1
NUDT4B
NUDT4
NBN
PHF3
PIP4P2
NFE2L2
VRK2
TMA16
CLN3
APOBR
MTRNR2L8
CDCA3
SAXO1
RRAGA
LOC102724770
DGCR6
PHIP
MRPL42
RPGRIP1L
FTO
MFAP3
FAM114A2
AGBL3
MTIF3
ABCD3
FRA10AC1
NBPF15
WDR35
DTWD2
AFF1
USP30
POLR2M
SPEF2
SCRN2
OSBPL7
LRRC46
IKZF2
CMTM6
COG6
LDHB
C8orf88
CEP85L
FEM1C
ZNF250
LCA5
KRR1
MTF2
NSFL1C
SCOC
AP3B2
CC2D2B
BBS10
DCP1A
PDCD2
CAP2
PDE4DIP
ART1
WDPCP
MDH1
PFKM
ATR
ANAPC10
ABCE1
H4C12
H4C11
H2BC15
H2AC15
IL18R1
GINS3
CCDC178
GPR89A
MPHOSPH6
SPATA17
GPATCH2
SLC30A9
DCAF4L1
SELENOT
GK5
FOXO3B
ZNF214
NLRP14
COBLL1
BLOC1S6
ORC4
MBD5
DNAH2
UFL1
DBR1
SULT6B1
MMP8
ZNF891
ZNF10
CTR9
SNRPD1
CDK8
C12orf66
CETN3
BET1
CNOT4
TPR
ODR4
SUGCT
MPLKIP
PTX3
ACER3
LAMA2
ZNF32
PDCD6IP
CLDN12
SOAT1
SLC39A10
UFM1
WDR11
GAP43
NRAS
ZNF780A
WDR3
GDAP2
FRG2
DHRS7
DERL1
SNRPF
ZCCHC7
TMEM106B
SNX16
DECR1
GPC6
DSCC1
FAM227B
DTWD1
ZNF184
USP15
UBE3D
DOP1A
GNPDA2
TNPO1
FAM126A
RICTOR
PCBP2
CSTF2T
RPSA
SLC25A40
DBF4
TSN
DKK1
TMEM143
SYNGR4
ASCC3
TMEM260
NAE1
DHX36
METTL25
CCDC59
MRPL39
USP45
TSTD3
CCT2
FEM1A
VPS45
SUPT7L
SLC4A1AP
BCAP29
RNF146
ZNF93
DNAJC3
PINX1
KBTBD8
RAG2
IFTAP
KDM8
REL
FBXW4
HLCS
PAXBP1
GHR
CREBZF
VWA8
C21orf91
CDKN2B
WDR31
BSPRY
C3orf18
DEPDC1B
TMIGD3
ADORA3
MRPS28
HEMK1
ZSCAN25
GUCY1A1
IRAK1BP1
KIFAP3
PUS10
PEX13
GLIPR1L2
ARHGAP28
HEPACAM2
MRPL44
ZNF670
INVS
ERP44
ZSWIM2
ARL6
VPS50
AHCTF1
GTF2B
GNAL
PSMB8
PDGFD
TAP2
MPHOSPH10
MCEE
RBIS
DENND1B
TMEM43
CHCHD4
NT5DC1
HENMT1
RTRAF
BAZ2B
ZNF91
SNX15
FNTB
RFT1
VPS41
KDM5A
CCDC77
PPIP5K2
ZMPSTE24
TMCO2
TMED7-TICAM2
TMED7
TANC2
LAMTOR3
NCOA7
CROCC
RNF150
C2orf69
RBM45
PDE11A
STX18
C10orf88
GDAP1
LTA4H
TMBIM4
SYT1
IRAK3
RUFY2
ZNF675
BLOC1S5
SERPINI1
PDCD10
SETD4
CBR1
RBBP9
GPR85
HSF2
TMEM38B
ODF2L
RPS15A
GLCE
PCNX4
LRRC57
HAUS2
TTC26
STX7
COL23A1
ATP9B
CHD9
CBWD5
PEMT
CBWD3
USP47
TCAF1
RFC3
DTD2
TRA2B
KLHL20
PRPF18
MME
MXD1
ZCCHC4
AGK
VEZT
FGD6
SRRD
HPS4
PPIC
SCRN3
CIR1
MRPL1
SFR1
ZBTB14
RGS19
OPRL1
LKAAEAR1
NSUN6
ARL5B
PRPF38B
SMARCA5
ELMOD2
ETFDH
C4orf46
RPS6KC1
ITGA4
UMAD1
ZNF165
OR1F12
CAT
RGS2
TMX1
INTS12
GSTCD
ANKRD35
HMGB1
SEC22B
SPRED1
GUF1
TOX4
RAB2B
CTH
USPL1
ZNF510
TRIQK
DDX60
SEMA3A
H4C6
C8orf37
H3C6
H1-3
NUP54
STEAP1B
MPP5
TBCK
AIMP1
MTFR1
C18orf21
SCYL2
RAB27B
DEPDC4
COPB1
KATNBL1
ZNF695
SNX12
FH
FAM174A
SENP1
NMI
PSMD14
COX7C
GHITM
RAB11FIP2
PREP
RC3H1
B3GALT1
RAP1GDS1
RANBP17
ACYP2
NKAIN2
SVIP
ALG10
EPHA3
RPS7
SPRY3
RAB3C
TMLHE
GATB
CDCA7
ZFP1
SYCP2
PPP1R3D
FAM217B
CENPC
TMED5
CCDC18
HSCB
CHEK2
TMEM242
KPNA5
POP7
RSPH4A
SLC25A36
TRIM16L
MAP9
ZNF614
METTL16
TWF1
ZBTB20
CXCL2
WDR87
SIPA1L3
HMGB2
SLC25A26
C5orf51
CCNC
ALKBH8
SLC9B2
WBP11
C12orf60
ZNF736
PLAA
IFT74
IFNAR1
ATP10D
PTCD2
MRPS27
ZNF205
SESN1
PRRC2B
ZNF326
PLPP1
CUL2
CNOT2
ZNF92
ANKRD46
CLCN3
ZNF518A
NEK1
WDHD1
SOCS4
HDHD5
SS18
RWDD2B
NCOA4
GLYATL1
USP32
FAM110B
USP16
ZNF76
SH3GLB1
MTMR6
PCSK5
TEFM
CGRRF1
WDR36
RAB8B
ZKSCAN7
RBM8A
PEX11B
HEATR5B
GPATCH11
SRI
SUCLG2
ZNF782
EXOC5
AP5M1
COQ3
TUBAL3
NET1
ZFC3H1
THAP2
SLF1
KIAA0825
VCPIP1
C8orf44-SGK3
LDB2
EIF5A2
APOL2
USP38
EEF1AKMT1
SCLT1
C4orf33
POLR3E
VTA1
NMBR
PGBD1
BIN3
CDK5RAP2
ACVR2A
PDIK1L
SWAP70
UAP1
GTPBP10
CYS1
COMMD10
RMDN1
CPNE3
PRDM7
TSPAN12
ZNF343
BIRC2
ZNF649
BTBD10
ULBP1
TCTEX1D1
ZNF491
MED30
ZNF74
SLFN11
AKAP12
TMTC1
SP3
ZNF391
TTC30A
TUBGCP3
SNRPD3
GUCD1
HSD17B4
BMT2
GNG11
CBWD6
RPS4X
NPM1
ADAMTS3
HSPA6
TUBE1
FAM229B
CCNA2
LRPAP1
ZNF624
TMTC3
CEP290
ZNF780B
CHD8
MBIP
CEP128
BZW1
UBE2E2
TMEM248
RABGAP1L
ERICH2
PIGN
PEX3
ADAT2
ZW10
CLDN25
C1orf56
ZNF227
CEP83
KCNK12
GOLM2
ZNF709
GPN3
FAM216A
PNISR
BCL9
ZNF322
PRRC2C
ITGAV
SENP6
PRKCQ
TUSC1
MKRN2OS
MKRN2
PLEKHA5
MPPE1
XPR1
SARAF
H2BC17
H2AC17
CAND1
OR2B2
ZNF43
NAP1L1
ZNF300
NUP35
SPATA13
TMEM168
OCIAD1
PBLD
HNRNPH3
SPNS1
MKLN1
TMCO4
PELO
ITGA1
PGM2L1
FAM240C
GTF2H2
TNPO3
NFATC2IP
ZSCAN12
ZNF330
GFM1
OTUD6B
ZNF17
MRPL16
RBBP5
ZC3H14
PTPN21
SLC30A1
ANKRD36
RPL7
RDH10
PSMA1
GOT2
RNF7
THBS4
MTX3
TNKS
RBM12B
TOMM5
ZFYVE16
C2orf73
CEP57L1
ZNF471
NANS
SIKE1
RPL21
REXO5
ERI2
THAP5
DNAJB9
INTS10
CFTR
ZNF470
GOSR1
TFPT
PRPF31
MTRNR2L2
MSH3
DHFR
MTHFD2L
KPNA1
PLEKHA8
FKBP14
KCNH1
RNF19B
FBH1
ANKRD16
HAPLN1
AADAT
KCNIP2
COG3
RPL27A
PTDSS1
MTERF3
ZNF451
HEXA
TEDDM1
GLUL
FIS1
CLDN15
PCCA
USP40
LHFPL6
GRIK2
THSD7A
SNX2
SRGAP1
WAC
CUL5
SLC2A12
TFAM
INTU
ASNS
FAM180B
LUC7L2
FMC1-LUC7L2
FMC1
NAA16
MTRF1
GORAB
ZNF25
GPR37
TIMMDC1
GCFC2
NDUFS3
KBTBD4
NCEH1
ATF7IP
AQR
TMCO1
DNAJC24
DCDC1
ZNF45
MTIF2
TRAK2
STRADB
SLC25A24
PDCD5
CASD1
HIF1A
METAP1D
THAP9
SEC31A
SEH1L
FAM214A
ETNK1
SLC25A27
CYP39A1
MTRR
MTMR2
FASTKD3
RMDN2
DEPDC1
QTRT2
CCDC191
DZIP3
CIP2A
WDR61
ZSCAN5A
NDUFAF2
ERCC8
NPRL3
RPUSD4
FAM118B
ZNF37A
ALKBH3
PRPF8
CRISPLD1
ZNF121
MCU
ANKRD36B
PTBP2
PHACTR2
ADGRL1
SOX5
FAIM
MPZL1
AGGF1
CCDC93
STX17
SLC25A21
CACNB2
CFAP299
FBXW7
RWDD1
CPLX2
KANSL2
SC5D
GUCY1B1
CHAC2
TANGO6
C14orf39
HERC4
CMSS1
PIMREG
AIPL1
C2orf42
SYT7
TMX4
TRPS1
TLK1
HECTD1
UBE2D1
SKP1
RAET1G
PHF10
CRYM
MINPP1
H2BU1
H2AW
LRRC6
IGDCC3
DNAH14
ZNF708
VAT1L
KITLG
COA6
COMMD8
NDUFC1
NAA15
IL15
NUP58
PPWD1
CENPK
CRB1
FARSB
MSRA
ST7
H2AZ2
MIA3
MAP3K1
CAPRIN2
PGM1
CCDC136
MANEA
PDE3B
NHLRC2
DCLRE1A
CYP51A1
THUMPD1
NHSL1
LRP2BP
ANKRD37
ZNF714
CCDC66
LIN7A
CCDC83
MMUT
CENPQ
ZNF35
OPN1SW
NT5DC4
CFAP69
MMS22L
ZSCAN22
TASP1
ZNF705E
RNF135
ELAC1
STX11
NAPEPLD
CTNNB1
FAM228B
SSH2
FOXJ2
RBM28
UBQLN1
EDEM3
WASHC4
KLHL7
L3HYPDH
JKAMP
TP53I3
SF3B6
MIS18A
CNTLN
ZFP62
FNIP1
SUCO
DELE1
ACP6
SREK1IP1
CWC27
CEP70
TMEM26
CHIC1
HMGN1
ZBTB6
RC3H2
SCGB1C2
SCGB1C1
ODF3
SRSF7
LANCL2
AKAP5
SPDYE6
ANKRD17
MAPRE2
LOC100289561
RAB28
TADA1
TTC39B
DCAF10
ZNF254
ZNF720
DMXL2
KBTBD7
FCGR1A
ZNF202
ICA1L
ZNF222
ACOX3
PIGK
TCHP
PIAS1
CFAP20
UEVLD
NEMF
FASTKD1
PIGU
CALM2
DPP9
PROS1
ARL13B
FBXL4
FAH
TFDP2
PPM1L
IQCH
AAGAB
PSTK
LSM10
SLC25A30
IL12A
ING3
ZNF628
NAT14
SLC10A7
ADH5
ZCWPW2
AZI2
RSL24D1
IFI27L2
SPICE1
ZNF354C
TMEM217
TBC1D22B
PAFAH2
LRRD1
RFX5
FAM222B
CCSER2
POGLUT3
ITPR2
ANK2
TMOD3
PRMT6
ORC2
ZKSCAN8
ZNF253
RNF141
IFRD1
SMAP2
TSGA10
C2orf15
DNAJC19
PALLD
LXN
ATF2
PPP1R42
MICU2
WDR12
SKAP2
NUF2
CARF
ATL2
TECPR2
CINP
PHAX
ALDH7A1
GRAMD1C
DLC1
PHTF1
PCOTH
MIPEP
C1QTNF9B
TMEM17
TUSC3
CEP97
AASS
ZSCAN31
EXOSC3
ZKSCAN3
ERO1B
NRDE2
TRIM40
UTP15
ANKRA2
DYNC1I2
ZC3H15
CAMLG
NRXN3