ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567335 | HUVEC
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◣ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
GTF2IRD2
NUDT4B
NUDT4
NAA25
COQ2
GTF2IRD2B
MCU
SYT7
JRK
NREP
RNF220
EPHX1
DEDD
ZSWIM6
LRP12
ZNF341
ANKRD40
CNIH1
CCN2
MSRA
MXI1
KDM3B
KATNBL1
ZNF860
OSBPL10
DISP3
DNAJC25-GNG10
DNAJC25
HOXA4
HOXA3
MAMDC2
CERS6
RHOB
TES
TMEM245
STK17A
NSFL1C
LDLRAD3
ARHGAP26
GPSM1
DNLZ
CARD9
BTG1
IBA57
MARK2
LMO4
RAP2B
KANSL1L
CHRNA5
AGFG1
JMJD1C
EIF4H
SCAP
NCOA5
YWHAQ
ZNF839
SLC9A1
TOP2B
GRIK4
OPN3
CHML
RHBDF1
MPG
HEBP2
RPS19
SLC39A10
GALNT10
TTLL11
HOXB8
HOXB7
HOXB6
BASP1
HHIP
ETS1
DUSP5
MAP2K2
POLG
TUBB4B
STPG3
FAM166A
SPTAN1
GNAI2
JPT1
EPM2A
UPF1
VPS36
CKAP2
PURA
PUF60
MET
FBXO30
ZNF609
PTBP1
PINK1
G3BP1
PDCD2
BCAP29
ACVR2A
ZNF280D
ASXL1
LIMS1
ARHGAP29
GNB4
CCSER2
UBE2S
ARID5A
CCDC71L
PRICKLE1
TSPAN5
QSOX2
NADK2
KMT5B
TLN1
CREB3
FBXL7
SIRT1
MARVELD1
PIGX
CEP19
TMEM71
PHF20L1
SPDYE14
SPDYE10P
CASTOR2
WDR26
BCAR3
CRPPA
ZHX3
ZFAND3
NSF
YBX3
ACTB
SRSF9
DYNLL1
SOCS5
DOCK7
LIN9
TBC1D8
NFIB
ACVR2B
FOXN3
LDB1
ATXN2
ST3GAL3
CHST3
ENTPD4
TAF4
SPTLC2
ITGB1
PAOX
ECHS1
PREP
PSD3
MAML1
SIK3
SMAD4
SNRK
TMEM255B
INPP5F
THSD7A
ZNF362
BACH1
ATL2
TM2D3
RRAS2
SLTM
C1QBP
SLC20A1
GCLC
TPRN
TMEM203
NDOR1
ESYT2
DYNC2I1
SUN2
TCF4
EXT1
SETD7
SYPL1
ELL2
RIC1
NXF1
CLTB
PPP3CB
ARNTL
RAB11FIP2
SHOC2
BBIP1
STK39
MYO1B
MCC
HDHD5
MFSD14B
ZNF668
ZNF646
CDR2L
PTEN
KLLN
PRKAG2
VAMP3
EIF4G1
PRR7
MOV10
TSPAN3
TATDN2
AKAP7
OXR1
ARHGAP28
UGCG
NOXA1
HDGF
IL17RC
SORBS1
FBXL13
ARMC10
CCDC138
TDRD7
INO80D
ZMYM4
SLC25A37
EPN1
AP3D1
RAC1
TRIM65
MRPL38
LRP8
ETV6
TTC21A
GORASP1
RALGAPB
LOC102724770
DGCR6
EID2B
EID2
PRKAR2B
SSNA1
ANAPC2
RNF146
DTWD2
ACTR10
MAP1B
BMP4
PLCB1
TPK1
UST
CPSF6
ARHGAP42
CAPN1
AP3M2
WDR1
PRKCA
OAT
USP3
ZDHHC14
FAM222A
NOCT
TMX4
HECTD2
TGFBR2
KLF9
STK35
PARVA
ZNF124
HESX1
APPL1
UBE2J2
SCNN1D
CHST11
ZMIZ1
MAP3K3
CD164
ZC3H12C
ETS2
FXN
LRRC8D
ATL1
MAP4K5
CHMP5
BAG1
TCF7L2
TSPAN10
NPLOC4
TSKU
PHRF1
MRFAP1L1
BLOC1S4
JAK1
VRK1
TRAPPC3
MAP7D1
KRT10
GNG12
ZNF706
ZSWIM7
TTC19
PEX7
AHCYL2
HSP90AB1
AHCYL1
MTHFD2L
SLC35B2
NFKBIE
TMEM64
RALB
ADORA2B
TRIM44
STK24
FAF1
CDKN2C
MSANTD2
KCTD18
SNTB2
IER5
CMTM3
SBNO2
TACC1
SMIM19
SLC20A2
C7orf26
RNF103-CHMP3
RMND5A
FBXO33
ECI1
D2HGDH
EHD4
IKZF2
TWF1
GCLM
NAV1
PRKAR1A
NUTM2E
SMIM13
GATA2
IFFO2
FRG2C
DEK
NDUFAF6
TFAP4
HMGB1
VPS4A
SEC24B
SCRT1
DGAT1
SASH1
RHOBTB1
FAM174C
CIRBP
SRSF4
UNC5B
ST7
PELI1
NFKBIA
PAM16
SSU72
GAB2
GATAD1
DONSON
SMARCD2
CAPZA2
HMGN1
DENND4B
YPEL2
ZNF513
SNX17
LRIG3
POLR3GL
LIX1L
ANKRD34A
EIF2B4
LPIN1
KCTD5
CDC42BPA
NR2C2
ZFPM2
ARHGAP10
OGFOD3
HEXD
TRMT1
NACC1
OSBPL5
METTL9
PEAK1
HMG20A
NAA38
CHD3
WTAP
SOD2
KBTBD2
GIGYF2
VPS26A
MAP2K1
CDC42
REV1
HIPK1
ATXN7
SOCS1
CREM
FAM193B
HYI
CALM2
UBE2E2
ID3
VCL
LCOR
EXOC6
BZW1
PCBD2
PTGES2
ASAP1
CAMSAP2
NOTCH1
CCDC117
FCHO2
ZBTB25
ZBTB1
EDIL3
LIG3
RAPH1
OTUD4
TMEM131
HHEX
NR3C1
MAP4K3
CEP68
XXYLT1
ECE1
AFAP1L1
TOR1B
PHC2
TMEM51
LYL1
IRF2BP2
MARCHF6
H2AZ2
RBM17
PRDM2
H3-3A
TMEM185B
YBEY
MCM3AP
UBE2M
CHMP2A
ENPP1
ZFAND6
HGS
ARL16
PIK3CA
PTPRA
ARID1A
EPB41
NIPSNAP2
MORC2
CEP170B
TASOR2
UBN2
COA8
BAG5
JUP
DUSP7
ZSWIM8
CHCHD1
PLPP4
GRK5
GET4
LACTB
UBXN2A
ZFAND5
BSN
GXYLT1
FDX1
TP53INP1
SNAI1
TAC4
APPL2
DBN1
ZNF511
TUBGCP2
NEDD4
NUDT3
TM7SF3
MED21
TPM1
FAM171A2
INPP5A
SFT2D3
INPP1
EIF3L
ANKRD54
ZHX1-C8orf76
ZHX1
TIGD5
EEF1D
RAB4A
ADD1
RSAD1
CHAD
TOMM40
RAB32
ZNF445
HEG1
ARHGEF37
TERF2
SPIN1
RAB21
LYPLA1
SMIM4
NT5DC2
IGFBP4
DCBLD1
CAST
ARFGEF2
TRIM33
USP36
ING1
CARS2
PABPC1
SCN8A
OSBP
WDR37
IDI1
CHAMP1
ILKAP
SFXN1
RAB35
NIN
RAB7A
NFIA
SRXN1
MBTPS1
LRRFIP1
B3GALNT2
PRPF40B
NRIP1
ZFAND4
HSP90AA1
TNIP2
SLC26A1
IDUA
NEK7
NXN
ITPKC
COQ8B
FBXL5
ZNF76
UBE2H
MTMR12
ROCK2
GGA2
RGL1
PRDM11
SMAD3
BOD1
TP53BP2
NAXD
REST
TM9SF3
NECTIN1
GLRX5
UHRF2
B3GLCT
PDSS1
ZNF148
TOLLIP
NUAK1
TMEM263
LIFR
NCOA6
DEGS1
HPCAL1
JADE2
STAT5B
ANKRD36B
ELK3
SSX2IP
TPBGL
KIF27
SMAD5
PHF20
CSF1
SPATA9
RHOBTB3
ANKRD12
TCF12
GPR146
PI4K2A
MORN4
DNMBP
CSK
TWF2
PPM1M
BRPF3
DNAJB6
DPY19L3
PTTG1IP
PRDM5
GRK2
CKAP5
TXNDC5
FKBP1A
SBF2
RAP2A
MITF
SCOC
TMEM211
PLOD2
MAP4K4
DYNLL2
TMED7-TICAM2
TMED7
PDIK1L
SLC25A24
RUNX1T1
RAB40C
HRH1
INAFM2
SQSTM1
CXCL3
POGLUT3
TXNDC16
RCOR1
ACVR1
YBX1
SEPTIN9
RALY
SPRING1
RNFT2
DMWD
DMPK
KCTD3
LIMS2
TNKS2
R3HDM2
INHBC
GPCPD1
H2AZ1
DNAJB14
ELK4
CUL3
MUC1
TNFAIP3
ADRM1
RUFY1
TUBB2A
HNRNPAB
SFI1
EIF4ENIF1
HACD2
FHL2
WTIP
SPR
SH3D19
CSNK1E
PEX10
PPP2CB
CDK14
SYNE2
SH3BP5
LOC100287896
LIPT2
SDCCAG8
CEP170
CACHD1
PREX1
MLYCD
UBAC1
NUCKS1
KLHL5
SEMA3F
LPP
MARK1
C16orf72
TBC1D30
FGD5
CTCF
PANK3
RBFOX2
DAPK2
SLC25A42
C7orf25
MFSD14A
SMURF1
COPRS
USP10
SFTPC
LGI3
OAF
PRNP
ERRFI1
ABCA3
ZC3H7A
MMP24
RBM26
DTD1
DNAJC21
GNAI1
FLNC
RNF152
FAM241A
CCND2
BPNT2
TMA7
CCDC51
ATRIP
NAB1
ENDOD1
COBLL1
SNX25
CFAP97
ELF2
SNX5
MGME1
C11orf91
ZNF48
ZNF22
SGMS2
TMEM151B
RNF216
PTPRE
LMBR1
ITGBL1
DLST
NT5C2
C17orf58
DPYSL2
RBPJ
C15orf61
MCMBP
PANK1
NIT2
NEDD4L
ELAC1
FBXL22
SMARCC1
FAM107B
ADAM23
PTAR1
RIPK1
TLE3
CCDC200
FLT1
GOLGA3
FOXN2
CDCA4
YRDC
C1orf122
USP49
SCCPDH
H1-10
MYO5A
COQ10A
ANKRD52
ODC1
SEMA4D
BAZ1B
EEA1
PEX5
PDP1
CRTAP
TBC1D9
VPS54
NAP1L4
ZNF131
ARHGEF11
HEY2
SOBP
DDAH1
MBD3
CANT1
TAL1
ARHGEF7
ZBTB20
USP14
FUBP3
IDH3A
ZNF503
RGMB
TMEM80
DEAF1
UBE2Z
TP53INP2
SRF
KLF7
DENND5B
PLEKHA8
FKBP14
DUSP10
ITSN1
CRYZL1
PODXL2
SLC2A1
PTPRB
GSK3A
SNX24
SPRY2
ADAR
GID8
DIDO1
VEZF1
MBD2
ARHGAP32
PRSS27
LRP11
TSR1
SGSM2
UXS1
ZFP91
LPXN
HSPG2
GNPTAB
NTAN1
USP24
NFKBIZ
PLCL1
ZFYVE21
XRCC3
ULK1
TAF5
DST
BEND6
SLURP2
LYNX1-SLURP2
LYNX1
LY6D
ADNP2
PFN2
ARIH1
MEAF6
SCARA3
GCSH
RNF139
UBE2E3
RFXAP
SKIDA1
USP6NL
MLLT10
FOXP4
MUS81
CFL1
RAD23B
SPCS3
C9orf72
ATXN7L1
PANK2
OSGIN2
ATP11B
SLC27A4
NRG2
SLC45A4
YPEL1
SPPL3
NUDT19
TKT
TRPC1
LRRC37A3
UBE2D2
MGAT5
PXK
GPR157
UTS2B
CCDC50
SH2B3
ADAM10
DPY19L1
SECISBP2
CKS2
INPP5E
CPOX
CARNMT1
XKR6
GDF11
SHROOM1
ASB1
CXXC5
DESI2
FBN1
SVIL
NAMPT
LRRC8A
KYAT1
CAPN2
CCDC88A
FMNL2
ZNF697
RAP1B
PKIA
MDFIC
CREBBP
FKBP5
USP31
RC3H1
FNTA
LEMD2
TRAK2
STRADB
TMEM150A
RNF181
LHPP
CD81
SUMO2
KHDRBS1
USP39
C2orf68
ZNF718
ZNF595
ARL5A
CSRNP2
FKBP9
PNKD
VSIG10L
SMCHD1
RNF169
ACSL3
TUSC2
HYAL2
HYAL1
PTX3
LRRK1
RHEB
LAMC1
ARL2
SIN3A
NT5DC3
U2AF1L5
U2AF1
CHMP4B
ATP13A3
TARBP1
PRKCE
ITGAV
RFX3
TRRAP
TMEM130
APLP2
TMEM150C
REV3L
OSBPL1A
SLC30A1
UVSSA
RELA
PTPN4
JADE1
KDM4B
XPO1
CLK3
CSNK1G3
SETMAR
ZNF710
PACS2
BRF1
CTSO
CIZ1
CYP2U1
TMEM181
ZMAT3
FOXK2
DCUN1D2
TMEM275
AP3B2
MSRB2
FAM47E
LRRC8B
ZHX2
SCARB2
MTMR10
ABCB10
MAPK11
FAM53B
PHC1
FANK1
SLK
ZNF282
LGR4
IMMP2L
SIPA1L2
FRYL
MAP3K14
CHIC2
KCNC1
COL18A1
MICAL2
AKAP12
HGSNAT
CDC16
RAI14
CDV3
B4GALT5
OTULIN
TBC1D14
NATD1
PTPRG
ZNF652
RAI1
MAP3K5
MAN1A2
CNNM4
SENP8
MYO9A
DDHD2
VARS1