ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10567329 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◢ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◣ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

MAMDC2
KMT2A
DUX4
FRG2C
CDCA3
NBPF1
PHIP
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TAF5
CDCA7
FRG2
USP31
CRH
THOC3
CCDC200
IRAK2
MFSD2A
SRSF6
ALDH18A1
H4C11
ADCK1
TMEM41A
POLR3H
GPR89A
FH
PIGH
C1orf53
ABCC5
METTL3
FEM1A
DHPS
CLCC1
MUC3A
RANBP17
PDE4DIP
NUP54
ZNF442
CDKN2B
GINS3
MTMR9
FLVCR2
KCNIP2
PEBP1
DDX1
MFSD3
GPT
CREBZF
RPLP1
SLC10A7
RINT1
NAAA
ATP6V0E2
H4C12
DARS2
CENPL
CRYBG3
CLSPN
ZNF878
CDC37L1
CCNB2
MYO5A
PDXDC1
GPR89B
SLC26A6
PPAN-P2RY11
PPAN
P2RY11
ANGPTL6
ZFP64
SDF4
B3GALT6
SEC22B
NAE1
NR2C1
USP30
POLR2J3
LSM6
LUC7L2
FMC1-LUC7L2
FMC1
PTGES2
ADGRL1
COX18
TOX4
RAB2B
MRFAP1
FOCAD
TCERG1
NF2
ZC3H14
SEMA6C
NSFL1C
TMX4
NOTCH2
CUL5
IARS2
BPNT1
GGH
C15orf61
CRTAP
CYP2R1
ZNF774
ASXL2
STX18
C14orf132
CTH
HYLS1
TBC1D16
CCDC40
IGSF8
RNF135
ZNF429
NBPF15
CHGB
RAB11FIP2
ZC3HC1
NBAS
NRXN2
RBMXL1
KYAT3
DHRS7
UCHL5
RO60
CFL2
WDFY2
DNAH2
MTF1
FDFT1
ZNF419
TMEM33
SGCD
ZDHHC14
PUS7
USP47
POLR3G
MBLAC2
SPAAR
C12orf45
TFDP2
H1-3
VASH2
ATP7B
ALG11
TARS3
ABI2
ABCB6
SNRPB
ZNF197
TMEM68
TGS1
SLC66A3
XPR1
SCN3B
COQ8A
UHRF1BP1L
ZNF862
PRKAB1
CRYM
TENT4A
CSTB
RSU1
ZNF799
ITGA4
YARS2
HERC6
CBR3
CEP83
SUMF1
CTSL
CHD1L
SECISBP2L
HEATR5A
ENDOD1
SELENOT
C17orf64
EFR3B
PCOTH
MIPEP
ZNF555
RIF1
CASP7
C18orf25
SLC25A27
CYP39A1
TMEM143
SYNGR4
ASH2L
PPP2R5B
SMIM5
LTO1
CMTM7
SERP1
EIF2A
NFATC2
HSD17B12
DEPDC1B
CC2D2B
TYMSOS
TYMS
GALK1
CCDC112
ATP5MC3
CRY2
AAR2
RSPO2
PDS5A
CBWD5
CBWD3
AHCY
ZFYVE16
SEPHS2
ATXN7L3B
AKR1E2
SLC25A30
TAP2
LCORL
INTS6
RAG2
IFTAP
DNAJC30
BUD23
VPS35
YIPF4
IREB2
ARMC1
PEMT
CPLANE1
ZNF786
OSBPL1A
VAV2
FAM219B
MTX2
OLA1
GTF2B
ASAP3
WASHC2A
MICAL3
MAPRE2
TOR2A
SLC1A4
RBL2
FANCA
PPIC
RDH11
CCPG1
C15orf65
PDZD2
C9orf40
PDCD6IP
CEP97
MRPL21
IGHMBP2
ZNF566
NUDT7
METAP1
GPR39
MRFAP1L1
ICA1L
RFK
EFS
TMEM9
EPS8
EFHD1
DEF8
ZYG11A
DMXL2
SLC17A7
NASP
PSAT1
USF1
TECPR2
CINP
ANKRD36C
KCTD12
DPH7
RNLS
LIPJ
RNF7
NLE1
ANKRD36B
WWC2
ARHGAP22
XRN2
PLEKHA5
FANCF
ACOT2
MTFR1
ZNF407
IL15
TSTD3
TMEM151B
NFKBIE
TSNAXIP1
RANBP10
IMP4
GOLGA1
CCDC115
CLIP1
MTMR6
GFM2
SIL1
ANKRD18B
ZNF441
ARMC8
SLC35E2B
ATR
CCDC74B
STRIP2
ZC2HC1C
ACYP1
DESI2
UBE2G1
SLC2A12
CDK8
C3orf33
CCNC
ZNF564
FBXO7
ABCC9
TRIM52
CCDC91
ATF3
ERAP1
ZBTB45
DYNC1LI1
ZFP1
KATNAL1
HSPE1-MOB4
HSPE1
HSPD1
H3C13
H2BC18
ZFP69B
PIK3C2B
DTD2
RAB18
ROPN1L
CFAP206
VAT1
RND2
ANKRD46
ME3
MYEF2
CTXN2
RAB11FIP3
CNIH4
SLC35E4
PACC1
VSIG10
TTLL4
CTDP1
RMND5B
CEP85L
PLK4
POGLUT1
SLC30A5
DLX1
BMPER
VRK2
ZNF337
DZIP3
CIP2A
CLK4
UGGT2
MARCHF3
MRNIP
NGRN
BZW1
MCMBP
NRG1
TSN
SNPH
INVS
ERP44
TFRC
SDHAF4
E4F1
MSRA
TNPO1
CCDC126
MAST4
GAS1
NT5C
ZC3HAV1
SOX6
C11orf58
CDKN3
PRR30
PREB
C15orf48
EPHB1
LYST
CLASP2
MRS2
RAD21L1
TRIM72
PYDC1
ZFP41
SLC16A14
NBEAL1
LRRC2
TADA1
TSC2
NTHL1
PWWP2A
KBTBD6
GRAMD1B
ATL1
ELOVL5
AKTIP
MTRR
FASTKD3
DEPTOR
STRIP1
ZSCAN31
TRIM62
TCHP
ZKSCAN3
CMTR1
BLMH
SKP1
FADD
ZNF777
PNPLA2
MAIP1
FAM72C
FAM72A
GTF2H4
ZNF25
UBXN4
TAP1
PSMB9
ZNF624
KIAA1586
ZRANB3
R3HDM1
ANKHD1-EIF4EBP3
ANKHD1
LSM5
AVL9
RPL39L
GPATCH2L
ETFBKMT
UBE3A
BBX
BVES
GOT2
RCBTB2
MRPL42
DSTYK
TMEM242
ERBB3
PNP
RSF1
AAMDC
SLC25A38
LNPK
HSF2
DGKE
C17orf67
ROBO3
PKP4
CCDC148
BARD1
SEC11C
ZKSCAN4
NMI
ZNF443
PTGFR
TRPC6
ZNF717
MAPKAPK3
CISH
RPS15
FAM53C
CDC25C
MYBPC3
TMC7
MYLIP
IFIT5
PTPRN
SF3B5
SERPINI1
PDCD10
CDCA7L
LTBR
RFC4
TMTC3
CEP290
ERO1B
DHX15
C3orf14
TACO1
PSMC1
FAM167A
ADRM1
ITPR2
KIAA2026
LRRC58
HK1
MND1
PTPA
CRAT
ZBTB17
PFKM
TOM1L2
DRC3
NOD1
CRADD
SRRT
CHERP
CD302
ZNF18
HIF1A
GK5
KLHL7
ORC2
RSPH3
REXO4
ADAMTS13
SLC26A2
PDIA5
PCDH9
PAK2
TBC1D4
ZNF326
UAP1
PKN3
TERF2IP
KARS1
SAYSD1
LSM10
MCM6
GPR37
ZNF765-ZNF761
ZNF765
HLTF
SLC3A2
VANGL2
TMEM120A
KIF2A
PHYH
DTX2
PCTP
FNTB
TARDBP
MANBA
RNF34
TRNAU1AP
MAN2C1
GRIA4
SPR
PANK1
RUVBL1
EEFSEC
PRTG
PPM1L
SLC35B4
ACER2
MTMR3
ABHD10
ST20-MTHFS
GPR63
ZNF785
NAPSA
ELAC1
ARHGEF7
TMEM43
CHCHD4
MSH6
PGM2L1
ALG6
KLHL20
BBS7
NAP1L1
PARP8
ZUP1
NPIPB9
G3BP2
FAM13C
TEFM
FBXL20
OPTN
CCDC3
ARL8B
OMA1
DAB1
CTBS
INTS8
TMEM254
SLC35B1
CFAP298-TCP10L
CFAP298
AGPAT4
SH3RF2
ANXA4
USP13
FBXL17
ADAMTS7
YTHDC1
CCN3
LDHB
TNFRSF21
GMCL1
TMIE
TFB2M
CNST
ALS2CL
PCGF6
APOBEC3C
AGPAT5
SLC16A1
LMF1
SOGA3
SPATA5L1
GATM
DSCC1
PGM2
RNF6
LRIF1
EAPP
TERF1
UQCC3
LBHD1
CDKN2C
UBE2L3
HSPA6
KCNAB2
TP53I3
MTCH2
ZNF780A
RIMBP3C
RIMBP3B
PIGO
COX14
CCNG1
DDAH1
MACIR
FECH
ZDHHC20
COPG2
WASF1
CDC40
EIF3J
NKX3-1
ZNF91
FRZB
RBM6
FIS1
ALDH7A1
PDHX
APIP
GNG8
GPN1
CCDC121
ZNF200
METTL22
FBXO31
ZNF32
B3GALNT1
POLR2M
MESP1
NEPRO
LSS
UFL1
C14orf39
DPYSL3
ZMYM6
PRPH2
CLPX
USP33
TMEM231
NME9
AOX1
TM2D3
CNOT3
PFDN4
ADCY6
SIAH2
RAD51AP2
LAMA2
MINPP1
KIF3A
XPC
LSM3
ZNF738
SLC35E3
SLC9B2
KLF1
GCDH
NPY1R
PIGF
CRIPT
WDR59
TRIM37
PSMA6
NEDD9
FER
LRP12
UBE2D1
GFOD1
DNAJC3
ABTB2
TMEM260
RPS4X
HERC4
SMG7
ZNF497
ZNF33B
TUBA1A
TM9SF1
HBEGF
C9orf85
ABHD17B
RNF38
TMEM50B
SLC25A13
IL6R
ZNF844
FGF9
TMEM220
H4C6
RNF141
DGAT2
ZNF518A
NUP35
UTP3
CMTR2
TRIM26
TMEM116
SOX15
ERP29
HACD2
LOC100287896
LIPT2
URB2
TAF5L
ITPKB
UROS
BCCIP
CPEB2
SLC25A46
COX5A
H3-2
UMAD1
KLC2
TMEM168
CEP85
MATN1
PLGRKT
HAT1
COX6C
C1QTNF6
SMPD2
PPIL6
GUF1
TMPPE
GLB1
GPI
CACNA1S
ASCL5
ACP6
ZNF287
TAPBPL
SPAST
CIZ1
FKBP9
SNED1
DNM1
MPC1
PLPP1
EXOC5
AP5M1
SC5D
GLYATL1
SLC31A2
DMAC1
DCAF12
ZNF671
ZNF264
TNFRSF14
TGFB1I1
PSMB8
NFKB2
MPHOSPH8
BTBD8
ZNF101
IFNAR2
C2orf69
SEPTIN7
EIF3M
CXADR
HINT3
MAFB
PDLIM5
PDIA3
TMEM243
SRSF1
PAF1
MED29
INPP5K
HSPA4
EIF4E
AATF
PPM1A
SVIL
TRIM11
FAM217B
SP7
SYCP2
SPRYD7
NUDCD3
ZNF346
TACR1
ZNF611
PNPLA6
GPR155
RELA
SMAP1
CASD1
UBE2L6
DTNBP1
PDIA4
SELENOI
ADGRF3
EPB41L5
PLK2
RALGAPA1
BMERB1
PCMTD1
ITGAV
UBE2Q1
AKAP13
DDX18
GNG11
DYNC2H1
SLC16A13
RBP1
VSNL1
STARD4
UVSSA
SH3BP5
XYLB
RABIF
RNF150
PI4K2B
NOL7
ECI2
SCAND1
FRMD5
OXA1L
DENND1B
CTNNAL1
AHR
DCAF10
ADAM15
AKAP9
UBA5
ACAD11
AMDHD1
AGL
TMEM192
CCDC38
HSP90AA1
ANKRD9
UBQLN1
DERL1
NME6
ZNF699
WDR20
TMEM109
SMC3
ITPRIPL1
YRDC
C1orf122
SEMA4B
CPEB3
FAR1
PPM1B
PIP4P2
ZNF670
TENT5C
MARCHF5
LRP8
AGK
CAMTA1
PIK3R1
SLC15A4
SETD9
RPRD1A
TDP2
ACOT13
SCLY
NCBP3
EIF3A
SLC35A1
EEF1AKMT1
GULP1
EVA1A
UBR2
STX4
ANKAR
SPAG9
ARMH3
SLC25A21
WDR47
LCMT2
ADAL
ARHGEF26
STBD1
ZNF408
ARHGAP1
METTL23
JMJD6
ABCD4
GNG12
GCSH
ZNF592
GPR137B
KIF23
LEKR1
ARF3
WDPCP
MDH1
NAGPA
LCA5
ZNF780B
CAMTA2
SLC2A4
NIPSNAP3A
ALG1
PTX3
ADA
ACOT6
FAM8A1
FAM98C
SLC37A2
C6orf136
POLR3F
DZANK1
PHC3
ACY1
TMEM245
HRH1
RICTOR
C1orf21
LGALS8
ZFAND1
HECW1
ADK
CAPN7
DNAAF2
GOLM1
EFCAB13
CD46
SMPDL3A
SCP2
STEAP2
TYW1B
PRKCSH
MIIP
CCDC151
MAP2K1
FAN1
FLT1
MRTFB
CTNNA1
CREB1
SH2D5
NFIC
DGKA
ADAMTS15
FNBP1L
TRIM27
ZNF724
CRELD1
NPIPB6
TLK2
PRKAR2A
PPM1D
ZNF343
CCDC88A
FOXJ3
SOCS7
TMEM160
SLC35C1
NRL
PCK2
FAM47E
AEBP2
STXBP3
FAM47E-STBD1
SNAPC3
TDP1
EFCAB11
C1orf216
ZNF212
NXPH3