ChIP-Atlas: Target genes

Potential target genes for HMGB1

Query protein: HMGB1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2765964 | HUVEC
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HMGB1's Target genes

◢ HMGB1: Average

◢ SRX10567335: HUVEC

◣ SRX2765964: HUVEC

◢ SRX10567327: IMR-90

◢ SRX10567329: IMR-90

◢ SRX10567331: IMR-90

◢ SRX10567333: IMR-90

◢ SRX3585704: Lung fibroblasts

◢ HMGB1: STRING

KMT2A
GTF2IRD2
GTF2IRD2B
MUC1
EPHX1
USP17L22
USP17L20
MXI1
NAA25
ZNF341
FRG2C
DEDD
ANKRD40
NSF
ZNF718
ZNF595
COQ2
KATNBL1
NUDT4B
NUDT4
SYT7
JRK
DOCK7
EPHB1
EIF4H
USP17L18
USP17L11
USP17L19
USP17L17
PRICKLE1
BCAR3
MCU
INO80D
RNF220
TMEM245
CNIH1
FOXN3
ZSWIM6
STK17A
R3HDM2
INHBC
JPT1
USP17L15
SBNO2
ZNF839
NREP
NSFL1C
CCN2
LDLRAD3
LDB1
TSPAN10
NPLOC4
TCF4
SNX25
CFAP97
TOP2B
RPS19
MYO1B
LMO4
CERS6
HNRNPCL1
MARK2
DUSP5
SMIM13
ARHGEF37
PEX7
PTBP1
TES
SCAP
UPF1
EIF2AK4
SPDYE14
SPDYE10P
CASTOR2
VPS36
CKAP2
QSOX2
SIK3
GALNT10
HOXB8
HOXB7
MFSD14B
ATXN2
BLOC1S4
MAML1
DNAJC25-GNG10
DNAJC25
PAM16
NCOA5
CEP68
HHIP
TM9SF3
YWHAQ
LIMS1
SLTM
JMJD1C
RAC1
SGMS2
RHOB
MARVELD1
CHRNA5
ITGB1
CALM2
UBE2S
ST7
USP17L21
USP17L12
MOV10
GNAI2
PIK3CA
PPP3CB
KDM3B
DNLZ
PIGX
CEP19
C7orf26
SOCS5
ECE1
GET4
SLC39A10
IBA57
FBXL13
ARMC10
ELL2
LRP12
HOXA4
RALGAPB
SBSN
DNAJC21
GRIK4
EXT1
WDR26
NUCKS1
KANSL1L
NADK2
SLC20A1
ZFAND6
EID2
FBXL7
CLTB
RAD23B
UTP4
DERPC
CHTF8
PHF20
SH3D19
SRSF9
DYNLL1
HDGF
ZNF148
PARVA
MET
HECTD2
AFAP1L1
USP36
PRPF40B
RMI2
ZBTB34
AHCYL2
FBXO30
ESYT2
PREP
ATL2
PELI1
ZFPM2
ID3
COA8
BAG5
FRYL
ZNF860
OSBPL10
SPTAN1
DENND4B
CARS2
ACVR2A
MAP2K2
TRAK2
STRADB
ACVR2B
PSD3
TPK1
FAF1
RASA4
HEBP2
TASOR2
PANK3
ZNF609
ASXL1
ITGBL1
MBD3
SPTLC2
ATL1
MAP4K5
PUF60
ARHGAP29
VRK1
ECI1
VPS4A
SSU72
VCL
ELK3
DISP3
HHEX
TBC1D8
RIC1
ZHX3
USP3
KRT10
LHPP
SMARCD2
MBTPS1
ADNP2
PKD1
TFAP4
NEK7
BASP1
ARNTL
CST4
SLC9A1
TWF1
C1QBP
MSRA
YBX3
TSKU
RHOBTB1
BCAP29
RAP2B
PLCB1
PINK1
FBXO31
POLG
VPS26A
TSPAN3
PRSS23
CCSER2
ETS1
KLF9
BSN
PDCD2
RHBDF1
MPG
UGCG
DENND5A
SIRT1
UBE2H
FHL2
ARHGAP26
GIGYF2
KIF3B
H2AZ2
INPP5F
CPSF6
AGFG1
CHAMP1
PTPRA
NUDT3
LIN9
PURA
SEC24B
EIF4G1
SNTB2
USP31
ARFGEF2
MTMR12
ZC3H7A
SETD7
SMAD3
PABPC4
ST3GAL3
RAPH1
COLGALT1
NOXA1
TRAPPC3
MAP7D1
RAP1B
RPS6KA5
DGLUCY
MCC
RAB4A
FNTA
ZSWIM4
MTSS1
TOR1B
ARHGAP28
G3BP1
UBE2J2
LCOR
ROCK2
ZNF280D
SNX5
MGME1
IKZF2
SNRK
GCLM
ARHGAP42
HIVEP2
CRPPA
MSRB2
OXR1
CAPN1
FMNL2
ANKRD54
TBC1D30
RBFOX2
TRNP1
ZNF362
SLC25A37
DYNC2I2
CHST11
RAD54L2
ADD1
TERF2
SMURF1
CDCA4
RARG
TATDN2
FAM222A
TMX4
PDCD7
RNF146
ARID1A
RSAD1
HERC2
ACTR10
PHRF1
ARRB1
EDF1
RAB11FIP2
AHCYL1
ECHS1
DGAT1
PEAK1
HMG20A
ANXA4
PKIA
AAK1
TMEM64
RALB
COPRS
BZW1
ZFAND3
TRPC1
SMAD4
OR4N4C
OR4M2
C7orf50
TMEM71
PHF20L1
AKAP7
JUP
PRICKLE4
FRS3
SVBP
ERMAP
VAMP3
CDR2L
FAM83G
HSPG2
ABL1
VPS13D
ADAR
ARHGAP10
FBXL22
LRRK1
GIT2
ANKRD13A
DEK
FAM174C
TPM1
IDH2
TNFRSF11A
TMEM255B
ADORA2B
STK39
AP3D1
GCLC
TRIM44
NR3C1
RDX
STXBP1
SP1
SRSF4
LPIN1
ERGIC1
GPR146
CCND2
C11orf91
VPS54
RGL1
PRR7
ZNF124
D2HGDH
FAM193B
USP49
TTC7B
TGFBR2
WDR1
WWP2
OPN3
CHML
PTEN
KLLN
METTL9
GATA2
CCDC117
TNIP2
MAP4K3
RBM17
CIZ1
IGFBP4
ODC1
YPEL1
CYP2U1
TIRAP
BPNT2
LACTB
PTP4A2
KRTAP12-2
THSD7A
EPM2A
UBAC1
SASH1
PI4K2A
MFSD14C
EPN1
INPP1
EHD4
KAT6A
ZSWIM8
CHCHD1
DNMBP
NR5A2
HS1BP3
CREG1
THRA
UBXN2A
GLRX5
NCOA6
FOSL1
NCOA1
GNB4
JAK1
AP3M2
STK35
ZSWIM7
TTC19
TACC1
GAB2
CDC42
UBE2M
CHMP2A
DNAJB6
HINT1
MFSD12
CHST3
OGFOD3
HEXD
ORAI1
RAB40C
GPCPD1
ARID5A
MAP3K3
GGA2
H2AZ1
DNAJB14
DLST
CD81
SHOC2
BBIP1
YPEL2
MARCHF6
BMPR1B
GRK2
SEMA4D
UBE2E3
SPPL3
UBE2D2
MAP3K14
KPNA4
OAT
UST
HIPK1
FLNC
XKR6
INF2
KCTD18
DDAH1
PLPP4
TOMM40
RAI14
UBP1
TEX261
TRAP1
FAM234A
TRIM65
RAET1G
TSPAN5
UVSSA
CSK
CSNK1E
TMEM181
ME2
MSANTD2
CAPZA2
GXYLT1
SGK3
RNF216
DAP
DRAM1
MYO5A
TTLL11
NXF1
PRKAR2B
BMP4
VEZF1
KIF1B
SMARCA4
FXN
IER5
NIT2
PFN2
NXN
ITSN1
CRYZL1
ATXN7L1
VARS1
UNC79
BTBD7
CMTM8
SYPL1
LIG3
RNF103-CHMP3
RMND5A
SUN2
HACD2
FBXO33
NT5C2
GNPTAB
RNF169
YEATS2
CMTM7
LGR4
GRAMD1C
SNAI1
DEGS1
NAP1L4
ZNF639
UBE2E2
SORBS1
SUMO2
RALA
ATP5PD
GTF2I
TPRN
TMEM203
NDOR1
DPP9
HESX1
APPL1
NAV1
SDCCAG8
CEP170
ZNF131
CCNI
TCEA2
COTL1
WSB2
AFG3L2
TAF4
LRRC37A3
CLCC1
SEPTIN9
LIMS2
RUFY1
USP10
SMARCC1
USP14
NTAN1
UCK2
TUBB6
TRA2A
KMT5B
TLN1
CREB3
GRK5
FDX1
ILKAP
FAM53B
CDV3
ADCY6
CD164
ETS2
TRMT1
NACC1
MBD2
NAMPT
KTN1
LMO2
RRP36
MEA1
ZFAND4
NDUFAF6
ASAP1
TXNL4A
ZNF513
TOLLIP
PLOD2
RALY
SFTPC
B4GALT5
FBXO10
CCDC88A
C7orf25
CXCL2
SLC35B2
RAB7A
ELK4
CDR2
TAPT1
UBN2
MORC2
NR2C2
KBTBD2
DCBLD1
SFXN1
CACHD1
ZMAT3
PHC1
BNIP3L
SPINDOC
BTG1
RRAS2
CSF1
BAZ1B
ZCCHC3
RNF135
CMTM3
MAP2
PTBP2
NFIA
MAP4K4
RMC1
AKAP12
TP53INP1
TM7SF3
DYNLL2
KLHL5
MEF2A
GPR160
TMEM44
THAP1
URGCP-MRPS24
URGCP
P3H2
UBE2D4
CYB5R3
KPNA1
PABPC1
OAF
C17orf58
GLI3
ORAI2
PBRM1
GNL3
PACS2
BRF1
ARL5A
LRIG3
HPCAL1
PRNP
PRKCA
PRKAG2
CRTAP
ITGA6
ZNF511
TUBGCP2
NUFIP2
PEX10
ZNF653
ODF3L2
PER2
NELFCD
FOXN2
STX11
UNC5B
RAB32
PPM1M
RFXAP
CHFR
BCAR1
MAPK6
LSM11
PAIP1
RGMB
SYNJ2
PITPNA
NAA38
CHD3
EXOC6
CAST
CUL3
NUDT19
COX20
UHRF2
PREX1
RHEB
JADE1
XPO4
PANK2
FRAT2
SLC35E1
TRAF3IP1
TBC1D12
XXYLT1
MAP1B
STK24
FAM241A
RXYLT1
NRIP1
NRF1
MKRN1
RNF215
TMEM120B
KRTAP10-9
NFIB
NEDD4
GLS
USP24
TKT
XPO7
ATP11A
RPL6
PTPN11
NRG1
EPB41
CEP170B
B3GLCT
MYO18A
PHF19
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
IL17RC
ZMIZ1
CACNA2D1
SLC12A2
RELA
ZYG11B
ERRFI1
HDAC7
PELI2
EP300
STK40
TMEM131
PCBD2
GID8
DIDO1
PRSS27
TRPS1
ZFHX3
SLC12A9
EPHB4
POLDIP3
FAM160B2
PPP6R1
BAHCC1
SNX2
FAM171A2
ARIH1
HLF
SLC16A1
ZNF706
POLR3H
TXNDC16
PODXL2
GDF11
ARHGEF12
SNRPD1
ANKLE2
FAM107B
OSGIN2
RFX3
SAMD13
TRAF7
STAG1
AKT2
DHX30
CDC42BPB
ENDOD1
B3GALT1
NOCT
ZNF445
CTCF
PRKD3
DOK4
MAPK1
SCOC
ACTB
CSRNP2
SMIM19
SLC20A2
REV1
HYI
FCHO2
SEMA3F
CAPN5
ARHGAP17
HMGN1
DENND1B
DONSON
GNG12
PHC2
NIPSNAP2
HNRNPAB
ANKRD52
LRRC8B
CHIC2
SUSD6
MAPKAPK5
MCMBP
RAP1GDS1
CCDC138
LRRC8D
LRRFIP1
JADE2
SPRING1
RNFT2
TMEM80
DEAF1
ATP11B
KCNC1
PLXNA4
PITPNM2
CSRNP1
SMYD2
SLC35D2
YWHAH
LUZP1
WTAP
SOD2
KDM4B
DIS3L
AGO3
FOXP1
FHL3
OR10G7
OR2A42
ANKRD36B
NUTM2E
TUBB4B
TNFAIP3
YBEY
MCM3AP
SERF1B
SERF1A
TRRAP
ARHGEF28
C1orf198
CHSY1
DDHD2
C9orf72
FKBP9
GPRIN1
ETV6
NPHP3
SSX2IP
ATRIP
LEMD2
CRTC3
TAF5
B3GNT2
CHMP5
BAG1
RAB35
DAPK2
XPO1
TLCD5
TBK1
AKIRIN1
YPEL5
HLCS
IRAK3
SENP6
INAFM2
SLC27A4
LETM1
ACTR1B
EIF5
FGFBP3
DENND3
CPNE5
SOS2
CELF6
CAP2
TSEN54
CASKIN2
OTULIN
PTGES2
GCSH
TCF7L2
DMWD
SRSF2
MFSD11
FNIP2
EFR3A
RILPL1
PTX3
BACH1
CAMSAP2
SCRT2
SPATA9
RHOBTB3
ARHGEF11
MEMO1
RNF187
FAM81A
MTHFD1L
DICER1
SCN8A
UBE2Z
SH2B3
OSMR
ZBTB24
MLLT6
KSR1
TMEM259
PROS1
PAQR3
HEG1
LYPLA1
TP53BP2
ANKRD12
RAP2A
USP6NL
TMCC1
THAP11
NUTF2
CENPT
PLK3
EIF2AK2
ARHGEF7
B3GNT5
DUSP7
TAC4
SPIN1
OSBP
TPBGL
CKAP5
DPYSL2
SRF
PODXL
PLCG1
RAB12
TTLL12
TCF7
SSBP4
USP44
FAM168B
PANK1
STX7
STAT5B
PPP2CB
FANK1
XKR7
SPATA1
GNG5
PIP4K2B
TCTA
RHOA
KLHDC2
DNM1L
DYSF
ZMYM4
DTD1
HSP90AA1
NRG2
ZHX2
ARF1
UCK1
PLXNA2
PHAX
KANSL3
FER1L5
CMTM4
ELAC1
AKT3
FAM20B
DCUN1D1
MAEA
HERC1
B3GALNT2
AP1S3
PIP5K1C
PRDM10
POLR1D