ChIP-Atlas: Target genes

Potential target genes for PRPF4

Query protein: PRPF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976791 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PRPF4's Target genes

◢ PRPF4: Average

◢ SRX10976818: Hep G2

◢ SRX10976819: Hep G2

◢ SRX4708032: Hep G2

◢ SRX10976790: K-562

◣ SRX10976791: K-562

◢ SRX4708080: K-562

◢ PRPF4: STRING

H2BC12
H2AC12
H2BC11
H2AC11
H2BC21
H2AC21
H2AC20
H3C12
H2BC17
H2AC17
PRDX1
H4C11
H4C12
ZFAND6
PMF1-BGLAP
PMF1
EEF1A1
H3C4
H2BC7
H2AC7
RCOR3
ACTB
SRSF6
H4C2
H3C2
H2AC4
EIF1
TESMIN
SCGB1C2
SCGB1C1
SRSF7
FUS
RPS12
MDM4
RAD23B
SRSF2
MFSD11
BRD2
FAM53C
CDC25C
H3C15
H3C14
H2AC19
H2AC18
MAT2A
ATF4
HERPUD1
UBE2S
H2BC5
H1-4
UNK
H3-3B
H1-2
BRWD1
H2AX
SLC9A1
DDX3X
ADARB1
GLUL
NXF1
H4C14
H2BC15
H2AC15
HSP90AB1
PPIA
UBC
NPM1
E2F3
DDX5
CEP95
STX10
IER2
MTRNR2L2
MSH3
DHFR
OAZ1
MTHFD2
RPSA
TUBB4B
RPS2
RNF151
NDUFB10
H2BC8
H2AC8
MORF4L1
DDX19B
AARS1
EGR1
ATF3
TSPOAP1
NAA38
CHD3
BBC3
HNRNPA3
HSPA1B
DUSP1
RPLP0
HSP90AA1
SESN2
MTRNR2L8
HNRNPA2B1
CBX3
GTF2IRD2
TRMT2A
RANBP1
UBR5
FOSL1
P4HA1
ACTG1
PRAME
HSPA5
MTRNR2L9
HNRNPAB
NUP214
RPL3
FBXL20
SRRM2
ZBTB2
IER5
SCAF8
EIF4A1
TOP3B
DNAJA1
APTX
WDR74
H3C10
H2AC13
H2BC13
FARSA
CALR
RHEB
UBE2L3
MPC2
DCAF6
RPS9
RPS20
C19orf48
TOB1
RPS3
CSKMT
C11orf98
MTA3
POLR2J3
RPS23
ATP6AP1L
H4C15
HNRNPH1
FTL
FOS
RRM2
DDIT4
NUCKS1
CHAC1
TRA2B
MCL1
RPLP1
H3C13
H2BC18
CCNL1
BCR
CIRBP
YDJC
CCDC116
CEBPB
BZW2
ANKMY2
ZNF467
TRIB3
KDM3B
ANGEL1
RPS16
DGCR8
GATAD2B
PLEKHG2
NCOA7
OGA
H2BC4
H2AC6
JUNB
TUBA1B
SKP1
AFF1
FTH1
MARCHF7
ENO1
PABPC1
NASP
RBM39
UBE2D3
PCBP2
H2BU1
H2AW
COIL
H2BC14
H2AC14
HMGA1
UNC45B
GTF2IRD2B
SLC3A2
MYLIP
NOC4L
DDX51
RPL13
MED15
PTPN6
C12orf57
PIP4P2
FSCN1
BAG3
MRPL40
HIRA
ZNF143
TBL3
SFPQ
GARS1
EIF4A2
C6orf62
PHF13
HMGN2
RSAD1
ARL6IP1
NABP1
MATR3
NRF1
KPNA2
PAFAH1B2
NCL
CTNNB1
MUS81
CFL1
LZTR1
H2AZ1
DNAJB14
LRCH4
FBXO24
NDUFS7
JPT1
TFRC
NFYC
PRKAG1
SLC1A5
AP5B1
EIF5A
MTRNR2L1
HSPA9
BAIAP2
ASNS
H2AC16
H1-5
MPP5
KMT2E
H4C5
KLF6
TAF1D
C11orf54
SLC38A2
NFE2L2
LDHA
BCLAF1
TUBB2A
SETD5
RPL5
CALM2
TRIAP1
RPL10A
HNRNPDL
ENOPH1
GDF15
TAF15
ATF1
SRSF5
MEMO1
EHD1
RPL35
ARPC5L
GTF2A1
CYCS
XPOT
WDR4
TUBA1C
EIF3J
DDX21
RFWD3
ENOSF1
HSPA8
DNAJB1
RPS13
PPP4R2
H3-2
VARS2
CSDE1
RPS8
SLC35E2B
LRPPRC
ARL15
SLC16A1
SCARB1
SLC20A1
PCBP1
RMI1
HNRNPK
SUB1
SRSF10
CSRNP2
MADD
GADD45A
PEX5
NOTCH2NLC
NOTCH2
EEF2
ACTRT3
CA8
LRRC37A3
PCK2
NRL
STMN1
NBEAL2
SRSF3
SPDYC
SERTAD3
CLPB
LSM8
VEGFA
RCC2
H4C3
H1-6
RPLP2
PIDD1
ILF3
RRP1
ZC3H11A
ZBED6
WASL
MCM7
AP4M1
FAM83D
SIRT4
UBA52
STMP1
RCC1
TMSB4X
YBX1
DR1
RPL12
LRSAM1
VCL
HNRNPR
HBP1
TAF9
RAD17
AK6
GORASP2
PTPN9
SLC39A10
ERMARD
LTA4H
GTF2H2
ZBTB4
SLC35G6
POLR2A
SRSF1
SLC25A1
EIF4G2
RPL36
HMGB2
HNRNPF
CKS2
TXNRD2
COMT
RBM17
TAF4B
MUC2
PBLD
HNRNPH3
RPL13A
GHITM
ZC3H4
POLR3D
DRAP1
C11orf68
TMEM238
RPL28
ZNF76
THUMPD3
MAPK1IP1L
HIC2
CSE1L
TYMSOS
TYMS
LRRC59
GAPDH
ODC1
HNRNPD
USP42
SSU72
ACBD6
DNAJB12
CDH15
LUC7L2
EIF2S2
CANX
EVA1B
UBR4
NOTCH2NLB
NOTCH2NLA
MYL12A
PPIF
RPL15
NKIRAS1
TBRG4
CDK11B
CDK11A
MIF4GD
YWHAG
DDX59
FKBP5
ARMC12
CD55
HNRNPU
PPP1CC
WDR25
WARS1
CRKL
C12orf65
TBL1XR1
PNP
DMTF1
YTHDF2
TENT5C
TIGD5
EEF1D
RPL10
TMEM41A
FBXO5
IQSEC3
NUP62
IL4I1
ATF5
SLC35E2A
DHX15
BAG6
APOM
EFCAB2
GTPBP4
ICE2
EIF4E
SREK1
ID2
SPATC1L
MCOLN1
SF1
MRPL48
RAB12
BRD3OS
SOD1
DHX9
ACTR3B
C5orf24
ZNF621
JUND
TMPO
RNF11
RPL38
SLC25A5
RBM12
CPNE1
PCDH1
C16orf95
CITED2
H4C9
CRCP
SNAP29
PI4KA
SDCBP
SIRT6
ANKRD24
C1QTNF12
MXD1
C1orf198
MRPS14
ACTR3
IPO7
ZC3H6
TOB2
ATP5F1B
GMEB2
TSEN54
CASKIN2
RPS3A
SSNA1
ANAPC2
ZNF740
CSAD
PPP1R14B
PLCB3
ATF7IP2
FNTA
ACVR2B
TMEM267
THAP5
DNAJB9
KMT5A
RPL18A
TNFSF9
NFE2
ANXA2
HNRNPL
TPT1
ZFAND5
RGPD2
RGPD1
DHRS13
KAT6A
RPS28
NDUFA7
MID1IP1
KATNA1
E2F6
PTP4A1
DDX17
RPL11
CTCFL
ZNF274
SDF2L1
USP14
FRG2
WDR1
ZCWPW1
MEPCE
EIF5
IFRD1
ESYT2
STIP1
STT3B
TPI1
CZIB
INPPL1
CREBZF
ECI1
ZFAT
H4C1
H3C1
H1-1
EIF1B
MRTO4
EMC1
SUPT3H
H3-3A
PHF19
FAM222B
CALM1
COPS7B
GTF2I
SINHCAF
ANKLE2
TPR
ODR4
BCL2L13
XBP1
LMNB1
YARS1
S100PBP
PSMG1
ARHGAP35
VMAC
NDUFA11
NRDC
ZNF24
THRAP3
PHF3
ZNF367
LANCL2
TNPO1
ARHGAP39
ANO10
ABHD5
SMC1A
RIBC1
TMEM60
PHTF2
RBMXL1
KYAT3
ALDOA
NUFIP2
MRPL35
IMMT
ZBTB7B
VOPP1
TEX46
KDM1A
UAP1
MAN2C1
PPP1R10
MRPS18B
PSAT1
YWHAZ
TP53BP2
F2RL3
ARL8B
SH2B3
TRAF7
INO80
PRELID2
FHL2
RPL14
FMC1-LUC7L2
FMC1
ATP2A2
ATAD2
HEXIM1
RPL17-C18orf32
RPL17
C18orf32
NCOA3
UBQLN2
ZFP1
GJB6
TBC1D22A
GOLPH3
PRRC2A
AIF1
PPIL2
SDE2
STARD7
TRIM24
EIF4B
RBM25
UTS2B
CCDC50
VPS37D
NOP56
COL23A1
PUM2
LSR
DDX39A
BCAP29
CLCC1
RPS21
THAP7
ZNF425
ZNF398
YPEL3
TBX6
SNRNP70
SETD2
PSMD3
MAN1A2
MAP1LC3B
FBXO31
ADK
DIAPH1
OR1F1
ETF1
TMEM68
TGS1
VAPA
CTSC
MARS1
ARHGAP9
FBXO4
GGNBP2
CD2AP
H4C7
H3C7
H2BC9
DEK
NQO1
SRSF11
CABLES2
CREG1
RAB26
HMGN4
SBNO1
SERBP1
ZNF787
BHLHE40
CREM
RHOF
SMAD5
UIMC1
NIBAN1
HOXB9
ZNF397
TYW1B
RPL23A
RAB34
ZBTB45
TRIM28
RPL32
LSM14A
ADGRL1
SRCAP
LOC730183
NANS
ATL2
ETV2
COX6B1
CNTNAP1
CCR10
CAMTA1
REPS1
BACH1
CCDC71L
GIPC1
MTF1
NUP210
FBXW2
H2BS1
ZNF655
SERPINB9
CAPRIN1
VDAC2
BRAF
LATS1
METTL23
JMJD6
KAZALD1
HEXIM2
CCPG1
C15orf65
GTF2H3
EIF2B1
POLDIP3
BCORL1
VCP
SMN2
SMN1
MKRN2OS
MKRN2
NUP153
CARS1
SPATS2
TOE1
MUTYH
PTMA
PCF11
ASH2L
SAR1B
RPS14
RIMBP3C
RIMBP3B
PYCR2
ZCCHC7
ARID1A
CDKN2AIP
ANGPT2
PCIF1
LONP1
CATSPERD
PRPF40A
ARL6IP6
GLS
RBM15
GLCCI1
PLEKHG4
PDIA4
SLC30A2
ARIH1
TMEM168
KCNK5
SPHK2
RPL18
FAM83E
TMSB10
ZNF786
SDHAF2
CPSF7
H1-10
EIF2D
MKNK2
MICOS10-NBL1
MICOS10
SON
GART
EIF4A3
DDX50
EGLN2
MYO9B
HAUS8
MTG1
UCHL5
RO60
TRIM27
CNBP
HLCS
CXCL2
GCN1
CYREN
PPAT
PAICS
OPA1
CSNK1A1
FAM3C
IGF2BP1
MORC3
PMAIP1
SOD2
USP47
WTAP
PCNT
C21orf58
TNFRSF10B
PCBP3
PRR19
PAFAH1B3
ADNP
ID1
SNAI1
DGUOK
OAZ3
ZFAND3
CACNB3
DUX4
RHBDD3
EWSR1
SNRPD1
SMIM29
RPS24
POLR3A
CCNB2
UCK2
KANSL1
LOC391322
PAIP2
SLC25A3
E2F8
TUBB
MDC1
UBA2
IPO11
TRIM13
DCAF10
RAPGEF1
SAV1
MKLN1
LRRC8D
RPS5
IARS1
ANP32A
ZNF644
LIG3
GSK3B
RIMBP3
METTL9
BAZ1B
POLG
RAD23A
SVBP
ERMAP
SEPTIN2
HDLBP
SPRED2
FAM86B2
PSMG2
CEP76
CAMLG
PGD
TAGLN2
AGK
RNF166
CTU2
TRMT61B
ZNF34
RPL8
TRMT1
NACC1
ING1
CHD4
ZNF627
USE1
OTUD7B
UBXN8
TEAD2
DKKL1
LARS2
AHCTF1
HSPB7
GDI2
KIF21A
FAM76B
CEP57
TUBGCP5
PTPRU
ADPGK
TNRC18
LOC100129484
CORO1C
BUD13
SFT2D3
CSRNP1
SND1
PIK3R3
COMMD1
CCT4
RINT1
CDKN1C
DNAJC25-GNG10
DNAJC25
CCDC200
AKIRIN1
PCBD2
COX5A
TMEM69
GPBP1L1
PKP3
ARRB1
DEDD
RTN4
THAP11
NUTF2
CENPT
EZH2
ZCWPW2
AZI2
MRPL12
EXOSC8
ALG5
KPNA1
FERMT3
TRIM25
ANP32B
RNPS1
BCAT1
PEX3
ADAT2
IER5L
BPTF
SNAPC5
LRRC61
ACTR3C
PDIA3
ARRDC3
MOB1A
HSPE1-MOB4
HSPE1
HSPD1
FAM168A
KAT7
RNH1
EPRS1
HIPK3
JADE1
CYP51A1
RAC1
U2AF1L5
U2AF1
PSMD12
TMEM39B
DPY19L3
PPDPF
YWHAH
AKAP10
RPL21
ACADM
ACLY
TSPAN14
SNRPD3
GUCD1
AK2
BTG1
CDK1
RNF32
CLK1
IER3
FLOT1
C11orf24
TMEM179B
FAM222A
UBAP2
DDAH1
CCN1
CD164
HSPB1
KIF15
KIAA1143
RBM14-RBM4
RBM14
PRC1
DLX1
ADRM1
DIP2A
C1orf216
UBIAD1
PSMD8
SRCIN1
TSPAN4
POLR2L
PTGES2
CD320
TARDBP
BICD2
SLC39A7
RXRB
HSD17B8
COMMD3-BMI1
COMMD3
BMI1
TK1
AFMID
FMNL3