ChIP-Atlas: Target genes

Potential target genes for PRPF4

Query protein: PRPF4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: PRPF4 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
PRPF4's Target genes

◢ PRPF4: Average

◢ SRX10976818: Hep G2

◢ SRX10976819: Hep G2

◢ SRX4708032: Hep G2

◢ SRX10976790: K-562

◢ SRX10976791: K-562

◢ SRX4708080: K-562

◣ PRPF4: STRING

PMF1-BGLAP
PMF1
H2BC12
H2AC12
H2BC11
H2AC11
H4C11
ZFAND6
H4C12
H3C12
H2BC17
H2AC17
PRDX1
H2BC21
H2AC21
H2AC20
H4C2
H3C2
H2AC4
EEF1A1
WDR74
RCOR3
RAD23B
H2BC5
H1-4
SRSF6
H3C4
H2BC7
H2AC7
TESMIN
MTRNR2L2
MSH3
DHFR
BRD2
HERPUD1
GLUL
EIF1
MTRNR2L9
MTRNR2L8
ACTB
SRSF2
SCGB1C2
SCGB1C1
MFSD11
SRSF7
C1orf198
FUS
UBE2S
NGB
H1-2
FAM53C
CDC25C
ATF4
BRWD1
MDM4
UBC
H4C14
H2AX
OGA
RPS12
UNK
H3-3B
NAA38
CHD3
H3C15
H3C14
H2AC19
H2AC18
OAZ1
NCOA7
MAT2A
NXF1
PPIA
HNRNPA2B1
CBX3
HSP90AB1
DDX3X
MTA3
ADARB1
MTHFD2
BBC3
H4C15
MTRNR2L1
DDX5
CEP95
SLC9A1
RPLP0
RPS2
RNF151
NDUFB10
FARSA
CALR
C19orf48
DDX19B
AARS1
H2BC15
H2AC15
UBR5
STX10
IER2
HNRNPA3
NPM1
CIRBP
RPSA
UNC45B
FOSL1
SCAF8
H2BC8
H2AC8
GTF2IRD2
NABP1
MORF4L1
HSPA5
H3C10
TUBB4B
FBXL20
MCL1
SCML1
MARCHF7
H3C13
H2BC18
HNRNPH1
MEMO1
RPL3
H2BC14
H2AC14
PLEKHG2
SESN2
TSPOAP1
RPS9
P4HA1
E2F3
EGR1
TRA2B
ATF3
HSP90AA1
ACTG1
IER5
HSPA1B
TOB1
H2AC13
FTL
LTA4H
RRM2
HNRNPAB
ZBTB2
RPS20
RPLP1
DDIT4
H2BC4
H2AC6
TUBA1B
DUSP1
YDJC
CCDC116
EIF4A1
H2BC13
JUNB
RHEB
ADGRG1
NDUFS7
HSPA9
HBP1
TRMT2A
RANBP1
TOP3B
PAFAH1B2
H2BU1
H2AW
MPP5
ASNS
UBE2L3
CTNNB1
TRIB3
RPS3
NASP
NUP214
PIP4P2
RPS23
ATP6AP1L
FTH1
CYCS
FOS
ATXN2L
JPT1
CCNL1
CHAC1
MPC2
DNAJA1
DCAF6
APTX
SKP1
GARS1
CNOT3
ZC3H11A
ZBED6
PRAME
KMT2E
EIF4B
ENO1
TFRC
GTF2IRD2B
CSRNP2
BRD3OS
HMGA1
RPL13
NRF1
PABPC1
CSKMT
C11orf98
PTPN6
C12orf57
SCARB1
RBM39
ZBTB40
CALM2
CCDC200
POLR2J3
VARS2
APBB2
SRRM2
HNRNPDL
ENOPH1
EIF4A2
C6orf62
SLC3A2
CEBPB
ANGEL1
MYLIP
TUBA1C
TAF1D
C11orf54
DR1
TBL3
ZNF467
RGPD2
RGPD1
STMP1
RPS16
RMI1
HNRNPK
RPL12
LRSAM1
MRPL40
HIRA
ACTRT3
SLC16A1
EIF3J
BAIAP2
H2AC16
H1-5
KPNA2
ZNF143
ARL6IP1
TMEM216
DDX21
GATAD2B
NUCKS1
RCC1
LDHA
MADD
UBE2D3
BZW2
ANKMY2
FAM83D
DGCR8
RPL10A
MATR3
HMGN2
TMSB4X
FSCN1
NCL
KLF6
TAF15
UBXN8
SLC1A5
SFPQ
H4C5
SETD5
SLC38A2
BCR
EHD1
CIC
MUS81
CFL1
H3-2
OR1F1
GDF15
CDH15
RPL23A
RAB34
ODC1
FRG2
H4C3
H1-6
KDM3B
PCBP2
NFYC
AFF1
PHF13
MED15
MAPK1IP1L
PRKAG1
BAG3
CSDE1
AP5B1
SOD1
LZTR1
RPS8
H2AZ1
DNAJB14
FAM234B
SUB1
PPP4R2
PPP1R10
MRPS18B
RFWD3
NFE2L2
SLC20A1
ENOSF1
PCK2
NRL
DUX4
CD55
BCLAF1
TRIM48
RPL35
ARPC5L
XPOT
PBLD
HNRNPH3
CKS2
WDR4
GTF2A1
RPL13A
SPDYC
RPL5
GTPBP4
EIF5A
PPP1R15B
GAPDH
ZBTB4
SLC35G6
POLR2A
SRSF10
CA8
SRSF5
ZNF740
RPL36
CSAD
STMN1
PCBP1
NOC4L
DDX51
SLC39A10
CSE1L
HOXA4
YBX1
YTHDF2
SERTAD3
ATF1
PRR14
CITED2
YWHAG
VCL
EEF2
ADNP
NBEAL2
DDX59
H4C9
MAMDC2
RPS3A
ARL15
MRPS14
METTL9
SRSF3
LRCH4
FBXO24
FAM222A
TMPO
MYL12A
UAP1
SRSF1
BCL2L13
H1-10
GHITM
TUBB2A
LRPPRC
TEAD2
DKKL1
WASL
TMEM267
RSAD1
HSPA8
ZNF76
PRRT1
PPT2
ZC3H4
SIRT4
GADD45A
RPS5
PTMA
ZFAT
NUFIP2
CANX
MCM7
EIF4G2
AP4M1
MCOLN1
DNAJB1
SNAP29
PI4KA
PEX5
PPIF
RNF213
TAF9
RPL18A
RAD17
C12orf65
AK6
ACTR3
TXNRD2
COMT
CLPB
RPL15
NOP56
NKIRAS1
DMTF1
TNFSF9
NOTCH2NLC
KCNK5
LSM8
SREK1
RNF11
CDK11B
CDK11A
RPLP2
PIDD1
DNAJB4
ILF3
HNRNPU
H2BS1
TENT5C
HNRNPL
HMGB2
VAPA
PRRC2B
PSMG2
CEP76
UBR4
RBM17
NFAT5
TIGD5
EEF1D
FKBP5
ARMC12
HNRNPD
SLC35E2A
SF1
HNRNPR
GORASP2
VEGFA
TBL1XR1
NOTCH2NLB
NOTCH2NLA
WDR1
NOTCH2
ZCWPW1
MEPCE
LUC7L2
XBP1
COL23A1
STT3B
ZBTB45
TRIM28
RPS13
BAG6
APOM
RRP1
SLC35E2B
ETF1
POLR3D
GTF2I
IPO7
FRG2C
FHL2
TPT1
CTSC
PPP1R14B
PLCB3
EIF5
EIF2D
SDF2L1
ANO10
ABHD5
GTF2H2
SDCBP
MAP1LC3B
FBXO31
ID1
TPI1
ZNF34
RPL8
POLR2J2
SUPT3H
DHRS13
ID2
WDR25
WARS1
TRIAP1
HIC2
TMEM41A
SSU72
ACBD6
TRIM25
RPL38
TBRG4
ZNF274
LRRC37A3
ZC3H6
HMGN4
EIF2S2
ANKLE2
TAF4B
MXD1
CALM1
TMEM68
TGS1
KAZALD1
DHX9
THAP5
DNAJB9
SMAD5
PSAT1
ATAD2
SMC1A
RIBC1
VMAC
RFC1
NDUFA11
DRAP1
C11orf68
RPL14
SH2B3
LARS2
PTP4A1
ICE2
CZIB
IFRD1
AHCTF1
DNAJB12
EIF4E
TYMSOS
TYMS
PCF11
GJB6
YWHAZ
TRMT1
TMEM60
PTPN9
PHTF2
NACC1
DEDD
VPS52
RPS18
B3GALT4
H4C8
LMNB1
ERMARD
TBC1D22A
HEXIM2
CRKL
CDK12
UCHL5
STYXL1
RPL17-C18orf32
RPL17
RO60
RBM38
MUC2
MDH2
H3-3A
FAM3C
C18orf32
TP53BP2
MKNK2
TOB2
HNRNPF
SNRPG
NUP62
LRRC59
IL4I1
ATF5
NFE2
MRPL35
IMMT
EFCAB2
ZFAND5
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ORC2
RPL32
FBXO5
CRCP
PNP
UBA52
SLC25A5
SERPINB9
IGF2BP1
ZNF367
SPHK2
RPL18
PCIF1
FAM83E
TMEM238
RPL28
COIL
RBM12
CPNE1
HES7
UIMC1
H4C7
H3C7
H2BC9
DHX15
YARS1
S100PBP
PHF19
NRDC
IARS1
NIBAN1
ZNF24
USP42
THUMPD3
MARS1
ARHGAP9
RPS15A
H4C1
H3C1
H1-1
HINT1
ACTR3B
RBMXL1
PAIP2
KYAT3
CENPC
ATP5F1B
GMEB2
PSMG1
CAPRIN1
TARDBP
PUM2
MORC3
NCOA3
ETV4
ATF7IP2
THAP7
FNTA
PPP1CC
PCDH1
FMC1-LUC7L2
FMC1
TRIM27
BCL9L
AKIRIN1
IQSEC3
FBXO4
ESYT2
ZCCHC7
SLC25A1
LSM14A
EIF1B
SREBF1
SLC25A3
LSR
EVA1B
SFT2D3
MKRN2OS
MKRN2
C5orf24
SPATC1L
LONP1
CATSPERD
ZNF655
LANCL2
BAZ1B
TRAF7
RCC2
ZNF124
PMAIP1
ADGRL1
SKIDA1
SBNO1
MID1IP1
MRTO4
EMC1
RPL19
HSPB7
CACNB1
POLG
ANP32B
RNF187
PSMD5
ALDOA
TNPO1
SSNA1
SERBP1
E2F8
ANAPC2
USP14
RPL10
RTN4
MAPK1
ZNF460
NUP153
NGLY1
GOLPH3
ZNF621
MIF4GD
PRPF40A
ARL6IP6
TMEM79
SMG5
DDX17
ADK
ZNF425
ZNF398
RNPS1
CCNI
MAN2C1
ING1
HEXIM1
GMPS
ASH2L
RPL22
AK2
SAR1B
MRPL48
DCAF10
TSEN54
RAD23A
PRRC2A
JADE1
DEK
CASKIN2
AIF1
UBAP2
TUBB
MDC1
SOD2
CCPG1
C15orf65
TPR
ODR4
F2RL3
MYC
C16orf72
SIRT6
RHBDD3
EWSR1
ANKRD24
NQO1
GLS
DDAH1
CCN1
CAMTA1
SRSF11
RFX3
USP47
RBM15
GDI2
CSRNP1
RPL11
MICOS10-NBL1
MICOS10
MTCH1
HOXB9
CTCFL
RPS10-NUDT3
RPS10
KATNA1
UBE2F
SINHCAF
REPS1
MTRNR2L6
CYP51A1
THAP11
NUTF2
CENPT
ANXA2
TMEM187
RAC1
HSP90B1
HCFC1
TMSB10
SON
GART
CARS1
BCAT1
ZNF787
VDAC2
SNX5
PPIL2
MGME1
JUND
TMEM106B
THRAP3
FUCA2
GTF2B
BRAF
SERP1
GGNBP2
EIF2A
RBM25
POLR2J
YPEL3
TBX6
SDE2
PEX3
IMPDH2
BHLHE40
ADAT2
TOMM6
NOP58
DDX39A
CDK9
GTF2H3
EIF2B1
DCLRE1B
AP4B1
STARD7
SPATS2
SNAI1
SARAF
MTHFD1L
SRCAP
LOC730183
HMGCS1
KIF21A
TXLNA
RPS14
HYOU1
BCAP29
ANKRD17
PRMT1
PHF3
CNBP
NUP133
CREM
BTG3
ZBTB7B
UTS2B
RPL27A
NMNAT1
METAP2
LZIC
LASP1
GTF2H2C_2
GTF2H2C
CCDC50
IER5L
E2F6
DARS1
CLIC4
BACH1
ZNF786
SNRPD1
SND1
RAB12
IBA57
HLCS
RPS28
RPA2
NDUFA7
RUNX1
RBM3
KMT2C
NFIC
NANS
EIF4A3
FAM133B
EZH2
EIF4G1
RAB32
CCT2
PIK3R3
U2AF1L5
U2AF1
SEC63
INPPL1
DDX50
BPTF
ACVR2B
SNX16
SNRNP70
PPP6R3
CABLES2
C16orf95
SNAPC5
IGF2BP3
DGAT1
LRRC61
INO80
CCDC71L
ACTR3C
ARID1A
SNX1
PIGW
MYO19
CLCC1
CIAO2A
CD164
ATP2A2
CREG1
ATL2
TRIM24
PSMA5
PDIA3
ZNF3
DYRK1A
UBQLN2
HSPB1
DGUOK
PSMD12
NBN
DNMT1
RBBP6
CHD4
ARHGAP39
CD2AP
SEPHS2
UBA2
POLDIP3
PCBD2
LRIF1
CREBZF
ARHGAP35
ANP32A
CAMLG
KMT5A
WTAP
CXCL2
CDC42
VOPP1
STIP1
ETV2
COX6B1
ZNF644
SMARCC1
SVBP
RPS4X
ERMAP
CTCF
TMEM139
MAPRE1
LIG3
CASP2
SDHAF2
CPSF7
SLC25A36
MND1
SMIM29
ZNF518A
SETD2
RPS24
RAPGEF1
PRELID2
PPP1R15A
POLR3A
PLEKHA4
ERBIN
DUSP28
ANKMY1
KIF15
KIAA1143
CCNB2
ANK1
FAM76B
FAM222B
CEP57
ZBTB8OS
RBBP4
SLC7A1
LDLR
IPO11
GLCCI1
TMEM39B
PRPF19
CDKN2AIP
SLC7A5
GCN1
BCORL1
PSMD3
UCK2
TBPL1
MTHFS
ING5