ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10977194 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◣ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

SNRPB2
H2BC12
H2AC12
H3C2
H2BC11
H2AC11
H4C12
H2BC21
H2AC21
H2AC20
H4C11
PEX3
ADAT2
H2BC17
H2AC17
SPATC1L
SRSF6
RPS12
STX16
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H1-4
H2BC5
NSFL1C
EXOC2
EIF1
PRDX1
ABCC6
TMEM242
WDR74
IQSEC3
FAM53C
CDC25C
MED23
POLR3E
PSMD3
FUS
H3-3B
PSMF1
SNX16
MRPL44
ZC3H6
H4C14
H4C15
ENOSF1
MTRNR2L8
PALB2
DCTN5
COPS7B
SRSF7
SRSF2
MFSD11
NOTCH2
RPS20
KANSL3
NPAS4
SCFD1
CBWD5
CBWD3
CBWD6
CTNNB1
H2AX
MAT2A
UBC
NXF1
MTERF4
IPO4
RPS15A
CCDC200
GTF2H2
ACTB
CPPED1
METTL9
HERPUD1
HSPA1B
CCDC88A
PCK2
NRL
MTIF2
RPLP0
H2AC19
H2AC18
P4HA1
SLC9A1
RPSA
GTF2H2C_2
GTF2H2C
STX18
RABGGTA
PET117
KAT14
RBM39
EEF1A1
SCML1
PRMT5
METTL25
CCDC59
TRIP4
SLC24A1
SLC35C2
NME1
AAR2
TMEM41A
H1-2
MTF2
TIGD1
EIF4E2
RBSN
ZSCAN12
GTF3C3
H2BC13
H2AC13
CLTC
ZNF76
MARCHF7
ATF4
SCAND1
CHMP4A
CALM2
SLC39A3
DDX5
CEP95
RWDD1
ZCCHC3
KIF16B
POLR2J3
HSPA5
HEATR5A
FAM227B
DTWD1
RPS16
E2F6
TTI1
RPRD1B
BRD2
OXA1L
RPS3
RPL3
RPLP1
COMMD1
CCT4
EIF2D
ACYP2
ARL6IP1
GOSR2
H3C4
H2BC7
H2AC7
WTAP
SOD2
HNRNPA2B1
CBX3
RPL10A
EIF2S2
RPS23
ATP6AP1L
MTHFD2
SMARCD2
MTRNR2L9
TMEM230
RPL5
MRPL39
DDX1
RPL23A
NABP1
ZKSCAN2
RUSF1
EIF4A3
TTPAL
DMAP1
H2BC15
H2AC15
RPS2
NANP
FRA10AC1
SLC39A10
TRIM25
ALKBH3
CYCS
NUBP1
INO80D
PPP4R3B
ZCCHC4
ALG10
CDK5RAP1
UGP2
CCNI
H2BC14
H2AC14
CCDC97
UBOX5
FASTKD5
H2BC4
H2AC6
MRPL3
ASXL1
TUBGCP3
DPY19L4
PTCD1
CPSF4
RGPD8
RGPD6
RGPD5
PSMA6
DCAF10
SLC25A21
UBE2S
TMEM216
NUF2
ARL14EP
MAN2C1
UBE2F
ARHGEF12
PDE11A
TOP3B
TOB2
RPL37A
LDHA
MRTO4
EMC1
YARS1
S100PBP
HECTD1
ZNF337
MRPS23
PLEKHM3
JPT1
ATXN2L
ZNF451
KDM8
C19orf48
GTF2B
SKP1
DNAJA1
APTX
IER5
TMEM18
MANBAL
HNRNPH1
ZNF219
DTD2
SNX5
MGME1
ATF7IP2
C2orf88
DHRS4L2
TRPC4AP
SRSF11
GTF2A1
DARS1
SLC16A1
STXBP4
COX11
SLC38A2
RAF1
GABPB1
SRSF3
TNFRSF21
RPL23
CTR9
TBP
PSMB1
BMS1
SURF6
HSPE1-MOB4
HSPE1
HSPD1
TSGA10
U2SURP
RBL1
PRORP
PPP2R3C
COQ7
EGR1
SEC14L1
METTL8
DCAF17
MOB4
RPN2
MROH8
CCN2
INTS12
GSTCD
TAF1D
C11orf54
ATF3
DCP1A
H2AC4
CZIB
RDH14
MRPS33
PABPC1
GORASP2
MTRNR2L2
AP1G2
FOS
HAUS4
HNRNPAB
WDR11
DHRS4L1
TPK1
RTF2
ZNF124
TUBA1B
NDE1
MARF1
HSP90AA1
FAM98B
GSTA4
MIPOL1
ARL15
PGBD1
SNX11
TOB1
LRRC59
SEC13
NOMO3
MCL1
MIA2
ANKRD46
SF3B6
FAM228B
ZBTB4
POLR2A
SNRPB
PIP4K2B
NBN
CHGB
ANKRD36
HUS1
ATP5MC2
AJUBA
PCIF1
ALG1
RAB37
PCTP
WASHC1
TRA2B
CHD8
C12orf73
ACIN1
OTUD7B
AARS2
RPS3A
NPM1
PTP4A1
MTMR2
SLX4IP
DHRS4
NCL
RMDN2
C6orf226
KPNB1
ZNF384
TTC4
RNF6
NUDT4B
NUDT4
PBLD
HNRNPH3
CSKMT
C11orf98
C14orf119
DCAF11
VRK2
SDCBP
GGA2
H2BC8
H2AC8
NUP214
C17orf75
XRN2
VPS16
PCED1A
MAIP1
MYL12A
CCNL1
SRCAP
LOC730183
ISOC1
REPS1
TEFM
RPL19
BCL2L2-PABPN1
BCL2L2
SLC9A8
ADRA1D
H3C15
H3C14
RBBP6
BRWD1
RANBP9
ID1
PSMD7
TATDN3
NSL1
ATR
SNAPC5
TINF2
SYS1
NCOA3
PARPBP
NUP37
MTX2
TUBB4B
RPL27A
SMARCE1
TRMT11
FAM83D
TBC1D5
MCM7
AP4M1
ANKRD36B
PDRG1
RAD54L
HDDC2
SPHK2
RPL18
NEU1
KPNA2
CCNC
MRPL16
CSNK2A1
WDR31
TAF3
ZFP1
NDUFC2-KCTD14
NDUFC2
ANKRD36C
IRF9
THUMPD1
PTRHD1
CENPO
SDC4
TBPL1
TMEM254
RPL31
GTPBP10
IMPDH2
DPH1
KAT7
CLK1
RBM34
WDR43
INO80C
MDP1
AGK
RNF146
SUV39H2
MFAP3
FAM114A2
ERCC6L2
HDAC4
LMAN1
C5orf24
MSANTD2
CCNG1
KIAA1586
CFL2
CIRBP
STAM2
OAZ1
NXT1
STAMBP
APOB
CDC7
PTPN2
STAT3
SECISBP2L
GLUL
REXO5
ERI2
DDX59
GABRR1
NBPF1
GDAP1
STX6
ABCD3
ICE2
MRPL58
CITED2
KANSL1
SRP54
CFAP20
LATS1
ACVR1
CDH24
DENR
TEX14
RAD51C
RBM45
CSTF1
AURKA
CCT7
SLC44A1
CBWD1
DDX19B
AARS1
GMNN
MAGEF1
PRADC1
CHMP3
TFRC
TAF15
IMMT
KAT6A
MRPS35
H3C13
PLK1
SAR1B
H2BC18
SDR39U1
TRIP12
FBXO36
SLC20A1
RFX3
MRPL27
EME1
DGUOK
SYT7
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
NOMO1
LINC02210-CRHR1
RPS6
ANKRD40
RIPK1
ZNF282
VPS52
RPS18
SRSF1
VTA1
NMBR
IST1
SNX17
EIF2B4
RBM28
GTF2H4
NOMO2
PIGBOS1
PIGB
PELO
ITGA1
POLE4
H3-2
YDJC
RBBP9
MTLN
FERMT1
XPOT
SRRM2
FAM207A
ERBIN
H4C5
ZNF609
ZSCAN30
TMEM267
TRDMT1
CRBN
PYROXD1
PRKAG1
DNAJC16
HSPA9
NDUFS7
DRG2
HNRNPC
DUSP1
NOP56
ZNF181
PRKAR1A
RPL37
RPL12
LRSAM1
VAMP4
SMIM12
PCBP2
TMBIM4
MMADHC
AGL
ADPGK
ZNF23
RIF1
KMT2D
C2CD5
SENP1
PFKM
VWA8
CYLD
TBC1D19
PNN
RAB5IF
ATP5F1E
MYLIP
CRLS1
H3C3
MRPS31
EAPP
ZCCHC7
NFE2L2
TANK
RNPS1
TMEM94
NAA20
RPL36
BZW2
ANKMY2
NAGK
RALGAPA1
ANKRD17
NDUFB2
BCKDHB
TACO1
NFYC
GPN1
CCDC121
RPAP2
GLMN
PKP4
CCDC148
DR1
ITGAV
AMMECR1L
ASNS
TCTN3
RPS8
THTPA
ATP5MC3
GTF2H5
FAM133B
EXOSC6
CASC3
PRICKLE4
FRS3
CUL9
MRPS11
MRPL46
TGOLN2
VSNL1
HOMEZ
YWHAB
EFHC1
STAT1
AGFG1
TCAF1
NANS
SLC30A6
HINT3
PSMC5
FTSJ3
KAT8
PTPN4
MRPS7
GGA3
AGPS
ANXA4
TNPO1
MTHFD2L
NT5DC1
SUPT3H
TOX4
RAB2B
TRMT61B
FTH1
GADD45A
PBK
PKIG
REV3L
SEC62
SESN2
SEPTIN2
HDLBP
SPOCD1
SKIV2L
NELFE
CSE1L
NARF
DDIT4
NMNAT1
LZIC
RRM2
HSP90AB1
LIMS1
PPP1R11
TMEM14B
RPL13
ASB1
AMACR
DCLRE1B
AP4B1
COG2
HEXIM2
RPL17-C18orf32
RPL17
TMEM186
PMM2
SDCBP2
PPA2
SRSF5
NET1
UBE2R2
RAB3IP
ZNF391
EIF4A2
ERMARD
RAD54L2
NOL10
SLC3A2
TUFT1
POLR2J
GBE1
AP5S1
ZFAND3
RTN4
ZNF248
NUDCD3
FLOT1
NOL7
EDC4
THOC1
EDEM2
MAPK14
PCID2
CUL4A
ASCC1
ANAPC16
TRAF6
RAG1
NRSN2
SLC35D1
ZNF770
SLC25A6
AURKAIP1
LZTR1
IARS1
G2E3
CUL7
RGL2
ZNF518A
GABPA
ATP5PF
LRP10
TMED7-TICAM2
TMED7
MRPS15
UBFD1
EARS2
LRRC37A3
SLC1A5
SGF29
RRN3
MAPK1IP1L
KCTD5
CYP20A1
GINS1
MAT2B
CENPC
USP42
STEAP2
SLC5A6
ATRAID
C12orf65
TUBA1C
RTEL1
PPIA
UNC50
COA5
TM9SF1
ERGIC3
RABL2A
SNRNP200
CPE
NFATC3
SMC3
ZNF524
FIZ1
C2orf42
SEC23A
USPL1
HMGB1
SLC35B1
ZSCAN9
RPS10-NUDT3
RPS10
FUT10
TMEM177
WIPF2
SMIM8
OMA1
DAB1
MRPS28
ZSCAN16
RETSAT
ELMOD3
FAM110A
UBE2D1
CMC1
SLC35A3
CWC22
PSMD14
EIF3C
DDAH2
ATAT1
FOSL1
CHD1
PON2
FBXO4
WDR55
RNF138
AATF
EBAG9
ZNF780A
MRPL40
HIRA
SREK1IP1
CWC27
MICU2
E2F3
LSR
TDP2
ACOT13
FAM177A1
NEMP2
RANBP2
HNRNPLL
ANGEL1
POLR3B
RMND5A
BRMS1L
NDUFV2
EPM2A
CSRNP2
MRPL53
KLHL8
GLS
GNAL
IMP3
ARRDC4
PHF3
YWHAG
TMEM217
TBC1D22B
METTL18
C1orf112
ALDH5A1
SEMA3D
PCF11
PRKRA
PJVK
FUCA2
COQ8A
NAE1
RBMXL1
KYAT3
GTF3C5
GTF2A2
TFB1M
CNOT1
EIF1B
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
TMEM167B
RPS7
ZKSCAN8
RPL22L1
USP40
MRPL48
KCTD18
CCNG2
SMIM26
UBR2
KRT8
KRT18
SLC35B3
ALG10B
ERCC3
BIRC6
ADI1
PFDN4
EEF2
DNAJC9
METTL22
COQ9
CIAPIN1
ELMO2
KATNBL1
BAG2
H3C10
CAP1
RPL27
TIMMDC1
CDK1
SAR1A
TNFAIP3
C10orf88
GTF2IRD2
UTP4
DERPC
CHTF8
POLR2C
MRPL45
ABT1
ACTR3
TEX10
LTV1
CKAP2L
SLC25A13
PHACTR2
FKBP1A
PSMD12
GEMIN7
HEXIM1
RSPH3
RPL9
LIAS
PRMT3
GSPT1
SELENOT
SCRN3
CIR1
RAD50
ANKAR
RGS9
MKS1
FYN
ZCCHC17
SNRNP40
H4C3
WWOX
CCDC90B
NUP62
IL4I1
ATF5
BCLAF1
TMEM33
ADPRHL1
ZC3H15
MRPL52
KMT2A
ATL2
ZNF335
CX3CL1
SORL1
CDKN2AIP
HNRNPA1L2
DDX50
C16orf72
ADARB1
PARK7
POLG
ASH1L
INTS2
GZF1
PMS1
ORMDL1
ZBTB9
NOP9
DHRS1
FGGY
CCDC138
RSPRY1
PSME3IP1
INO80B
ZFP64
ZCWPW1
MEPCE
DCPS
TOP1
SDHAF3
POFUT1
PLAGL2
TTC12
ID2
CHD9
REV1
WDR70
COPS9
SENP6
CEBPB
SREK1
TMEM170A
TEP1
VPS13B
MOGAT1
ZNF24
ZNF148
CALU
SLC39A7
RXRB
RPS14
TCP1
MRPL18
UBE3B
KCTD10
TMEM19
RPL38