ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10977195 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◢ SRX10977194: Hep G2

◣ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

SNRPB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDR74
ABCC6
STX16
EXOC2
MTRNR2L8
PSMF1
IQSEC3
NSFL1C
NOTCH2
IPO4
METTL9
COPS7B
H4C11
EIF1
CPPED1
SRSF6
TMEM242
SPATC1L
MED23
H3-3B
CCDC88A
DDX1
CLTC
MRPL44
PALB2
DCTN5
H2BC11
H2AC11
KANSL3
PSMD3
POLR3E
H4C12
ZC3H6
SCAND1
H1-4
SLC39A3
AAR2
H4C14
H4C15
WTAP
SOD2
NPAS4
CBWD5
CBWD3
CBWD6
MANBAL
PEX3
ADAT2
MAT2A
MTF2
GTF2H2
MTIF2
HSPE1-MOB4
HSPE1
HSPD1
PET117
KAT14
UBFD1
EARS2
SCFD1
ZNF76
RPS12
RABGGTA
UBC
SMARCD2
ZCCHC4
TACO1
CCDC200
NUBP1
TMEM230
PCK2
NRL
H2BC12
H2AC12
SCML1
PRDX1
DTD2
SLC35C2
RPL5
MTRNR2L9
PLEKHM3
HECTD1
ATF7IP2
RPS15A
FUS
DPY19L4
ACYP2
H2AC19
H2AC18
RMDN2
METTL25
CCDC59
UBE2F
C6orf226
TTPAL
SNRPB
CDK5RAP1
SNX16
MTERF4
MRPS23
MOB4
E2F6
STX18
PRMT5
ZKSCAN2
ZBTB4
POLR2A
CHMP4A
EDC4
NXF1
EXOSC6
FRA10AC1
CTNNB1
PLK1
RGPD8
RGPD6
RGPD5
BCL2L2-PABPN1
BCL2L2
RPL37A
NME1
NANP
MIA2
SLC25A21
SYS1
ZCCHC3
ZNF384
GTF2H2C_2
GTF2H2C
SRSF11
SRCAP
LOC730183
GTF3C3
UNC50
COA5
H2BC21
H2AC21
H2AC20
MARCHF7
MRPL39
TRPC4AP
DCAF10
PKP4
CCDC148
H2BC17
H2AC17
TSGA10
JPT1
TINF2
SLX4IP
WDR31
HDAC4
SRSF2
MFSD11
ATF4
RTEL1
AP1G2
PCIF1
H2BC14
H2AC14
NUF2
ATXN2L
WDR11
MRPL52
PIP4K2B
RPS20
MTMR2
STAT3
FAM53C
CDC25C
RPSA
RBM39
HNRNPA2B1
CBX3
HEATR5A
TTI1
RPRD1B
PPP4R3B
GDAP1
MAML3
RWDD1
C12orf73
SEC13
KIAA1586
ACIN1
C14orf119
TRIP4
BMS1
MRPL58
STAT1
RPL37
COMMD1
CCT4
WASHC1
WFDC3
DNTTIP1
NCOA3
RPS3A
CSNK2A1
RPS3
KDM8
OXA1L
DHRS4L1
MTHFD2L
ARL6IP1
MRPS31
SLC9A1
ATR
CTR9
HAUS4
IRF9
SLC9A8
CCDC97
PGBD1
DMAP1
MTHFD2
NAGK
SEC23A
H3C2
BRD2
ENOSF1
ANKRD36C
CFL2
HSPA5
NDUFC2-KCTD14
NDUFC2
VAMP4
ERCC6L2
ALG1
PBK
LIMS1
RPL31
TMEM216
ZSCAN12
ANKRD36
DCPS
TOP3B
LRRC59
ATP5MC2
RPN2
MROH8
HUS1
RPLP0
YARS1
S100PBP
EIF3C
NUDT7
DGUOK
TRMT11
HERPUD1
C1orf115
CBWD1
CSTF1
AURKA
DPH1
AHCY
TATDN3
NSL1
PTCD1
CPSF4
SNAPC5
ANKRD36B
ZNF219
TAF15
GTF2A1
SMARCE1
RBBP6
TMEM170A
RUSF1
KPNB1
EIF2D
NBPF1
SF3B6
FAM228B
ZNF248
PKIG
CALM2
NDUFS7
PNN
SDHAF2
CPSF7
USPL1
HMGB1
PCF11
ATG10
MTRNR2L2
TIGD1
EIF4E2
EAPP
GFOD2
ZNF609
MDP1
IST1
KMT2A
RBSN
NABP1
RPS16
DARS1
SLC44A1
C10orf88
DDX5
CEP95
SMIM12
RAB37
IMPDH2
NT5DC1
G2E3
TEP1
NUP160
SLX1B
SLX1A
BOLA2B
BOLA2
ZSCAN9
GCFC2
TUBGCP3
THUMPD1
COG2
POLR2J3
PSMD14
TMEM18
BOLA2-SMG1P6
SPATA6L
PLPP6
SRSF3
FAM227B
DTWD1
GTPBP10
DCP1A
MEMO1
ZFHX2
GTF2B
TAF3
RPLP1
AJUBA
STAM2
MICU2
CCNL1
TOB1
SECISBP2L
ZCCHC9
KCTD3
HEXIM2
TM9SF1
DYNLRB1
RBM12
CPNE1
INO80C
PELO
ITGA1
PSMC5
FTSJ3
PHIP
MAPK1IP1L
TRIB3
RPL19
CCT7
PRADC1
TMEM41A
CCNC
UBE2S
SYT7
NDE1
MARF1
VWA8
POMZP3
GOPC
CPLX2
KPNA1
CYCS
FAM98B
MRPL3
ASXL1
CHGB
DCAF11
RBL1
ZNF337
VRK2
TRIP12
FBXO36
RPS23
ATP6AP1L
ATF3
EIF4B
XRN2
PARPBP
NUP37
HDDC2
THAP9
SEC31A
KCTD18
RBBP9
MST1
PEX14
RAF1
SLC39A10
TBC1D19
LDHA
DDX19B
AARS1
IMMT
SDR39U1
NUDCD3
RPL17-C18orf32
RPL17
ERGIC3
TOP1
H1-2
C2orf88
CFAP20
KAT8
PNP
LRRC37B
KIF21A
PCTP
MTERF1
UTP4
DERPC
CHTF8
RSPH3
LARP1
SRSF7
UBOX5
FASTKD5
SENP1
PFKM
BIRC6
JRKL
CCDC82
CMTR2
SAYSD1
TMEM167B
FLOT1
RABL2A
BRMS1L
UBAP2L
C1orf43
CCNI
RIF1
GSTA4
ANKRD46
PDRG1
FN1
USP40
ERLEC1
ASB3
SUPT4H1
MOGAT1
ALKBH3
AFF1
EEF1A1
KMT2D
INO80D
PPP2CB
NOL10
MAP3K2
TOB2
NOMO2
KAT7
THTPA
CUL7
KCTD5
KLLN
GSTK1
C2CD5
TBPL1
DENR
SNRNP200
CCDC43
H2BC13
H2AC13
TJP3
DHRS4L2
TMEM254
PARP2
RNPS1
DHX35
STX6
RRN3
APOB
SMIM8
TTC21B
C6orf136
MRPL16
REXO5
ERI2
CZIB
RAD54L2
CUL9
SDCBP2
RPIA
RHOB
IFNGR1
HINT3
ACVR1
ISOC1
ZFP64
RTF2
GZF1
MAPKBP1
LRRC37A3
CCN2
AGK
SUPT3H
MRPL45
BAZ1A
RPS2
KIF16B
RPL23
SEC14L1
SAR1B
DIDO1
INTS2
SKIV2L
NELFE
NDUFAB1
ZNF383
LRP12
ACTR8
CTNNBL1
DLAT
SURF6
CASC3
RMND5A
ZBTB9
TMEM106B
ZNF335
ARHGAP5
MCL1
HNRNPH1
ARHGEF12
PSMA6
STXBP4
COX11
MTX2
SEC62
PRKRA
PJVK
CYP20A1
NUP62
IL4I1
ATF5
PMS1
ORMDL1
PLS1
CUL5
TGM2
LRP6
DBI
C2orf76
ANAPC4
AIG1
EXOC1
TEFM
MIPOL1
AGL
MTLN
LUC7L3
KAT6A
PFDN4
AMMECR1L
GINS1
MRPL15
H2BC15
H2AC15
ZNF391
CHEK1
VPS72
LANCL1
CPS1
SLC35B3
FAM156B
FAM156A
ITGB3BP
EFCAB7
CIRBP
CHMP3
ATAT1
NDUFV2
PNPO
SMIM26
UBXN2B
C16orf95
CMTR1
FAM133B
U2SURP
RBM34
THUMPD2
TTLL4
EIF3CL
STK4
HEBP2
LONP2
ABCC11
GNE
USP3
LURAP1L
RABEPK
GSAP
SLC24A1
TRIM25
EIF4G2
VTA1
NMBR
VPS16
PCED1A
PTRHD1
CENPO
PPP1R11
NAA20
TMEM177
CPE
NDUFA12
ZNF148
PCNA
SH2B1
FBXO33
BZW1
DCP1B
EIF4A3
SKP1
INO80B
TPK1
TRDMT1
SRP54
WIPF2
ZNF468
ATL2
XRN1
GLUL
PPIH
OTUD7B
TMEM14B
FAM177A1
MRPL53
NSF
COL1A1
H3C4
H2BC7
H2AC7
MRPL40
HIRA
MAIP1
NOMO1
PUS10
PEX13
ACSL3
VCPKMT
CSNK1D
USP10
SRSF1
DHRS4
PCBP2
KANSL1
LATS1
ADI1
TGOLN2
SULT1A4
SULT1A3
CSKMT
C11orf98
DRG2
RNF6
HNRNPC
TSC1
GFI1B
MRPL21
IGHMBP2
PRICKLE4
FRS3
NOP56
TUFT1
RAB5IF
EEF2
MRPS28
TTC12
NKIRAS2
DNAJC7
URGCP
UBE2D4
P4HA1
RPL23A
GABPB1
ADPGK
POLR2J
EFTUD2
CCDC103
SEL1L
TRIM37
OLA1
DDAH2
SOS1
ATAD2B
ABCC10
NPHP1
SERPINB6
RRP15
TBP
PSMB1
MAGEF1
CRBN
POLR2C
TIMMDC1
TJAP1
ABCD4
CEP20
HEXB
PANK2
ATG16L1
SNAPC3
DNAJA1
APTX
COQ7
SPHK2
RPL18
TEX14
RAD51C
TDP2
ACOT13
ACTR3
UBR2
GSPT1
C6orf89
LOC110384692
C4B_2
C4B
C4A
PIGBOS1
PIGB
ZNF451
PHF3
ZNF23
EPM2A
ETV4
ATXN7
STK16
GLB1L
ITCH
CAB39
RDH14
TMEM186
PMM2
KMT5B
RWDD2B
SMIM13
UBE2L3
FAN1
RALGAPA1
MRPS11
MRPL46
ADAM17
APPBP2
HMGN4
DNAJC2
NIPSNAP2
RRM1
MAN2C1
SSBP1
SLC35B1
FERMT1
MAT2B
PPIL1
LTV1
AKTIP
KIFC1
TRNAU1AP
PDE11A
RANBP9
EEF2K
CSE1L
NFATC3
NOP9
DHRS1
NUDCD1
TPT1
REXO2
ZC3H7A
MYH7B
GSS
SEPSECS
STRADA
HSDL2
SNX21
ZNF501
SRP19
INTS12
GSTCD
RTN4
AURKAIP1
POLG
SNX5
MGME1
CITED2
ZC3H15
FAM83D
ZFP1
ZKSCAN8
VSNL1
KRT8
KRT18
RPAP2
GLMN
NFAT5
CYP51A1
ASF1B
MRPL24
ACAT2
H2AX
RBM28
THOC1
ARID1A
POLR3D
HMGCS1
ELP3
LRRC40
GDF5
CEP250
RPL3
TMEM267
BRWD1
CLK1
NXT1
LMAN1
ZSCAN31
MRPS35
WWOX
FBXW2
SLC33A1
KDM3B
VAC14
MPHOSPH10
MCEE
TMEM14A
RABL2B
PIP4P2
USO1
PGRMC2
ALAD
MRPS33
ZMPSTE24
MRPS7
GGA3
PCID2
CUL4A
MATR3
SERINC3
INTS10
ARF3
MRPL19
GRPEL2
FXN
CCDC107
HSPA1B
RFXANK
BORCS8-MEF2B
BORCS8
HEXIM1
TMEM94
ATP5F1E
TCF12
ELK4
TPD52L2
NUDT15
TMEM214
CDC37L1
ATXN2
NEURL2
CTSA
RSRC1
PIP5K1B
BDP1
ZFPL1
U2AF1L5
U2AF1
CDCA5
PARK7
NBN
ARL14EP
PRORP
PPP2R3C
WDR43
SLC3A2
BECN1
TBC1D14
FOXQ1
NGRN
TOMM6
RBM15
STK35
MTRF1L
CENPS-CORT
CENPS
DMTF1
WDR41
LPCAT3
TMEM126A
GDF15
GORASP2
GTF2IRD2
SGF29
RREB1
SELENOT
DKK1
SP2
NPAT
ATM
CRNKL1
CFAP61
SPAG16
PUM2
DNM1L
TNFRSF21
RPS8
TMEM101
REPS1
SDCBP
SREK1
YWHAB
MRPL17
PIGU
ADSL
MRPL33
RPP40
TFIP11
GDE1
MRPS9
THEM4
RALGAPB
ANKRD20A1
TRIM39
VAMP5
PGBD2
ALG10
AP1G1
POLR2J2
STARD7
HIBCH
SFT2D3
TF
THBS4
MTX3
MINDY2
RBM45
CHD8
NR1H3
ACP2
MED4
SMG5
RPL13
RANBP2
TFAM
YTHDC1
HEATR6
CTBS
COMMD4
KHDC4
PPIA
GGA2
TMEM222
DNAJC16
MAPK14
POFUT1
PLAGL2
ORC2
VPS26C
KDSR
LRP2BP
ANKRD37
HNF4A
ATP6V0D1
NCAPH
DCLRE1B
AP4B1
UGP2
TANK
GID8
NEMP2
NCOA5
FAM149B1
ECD
EIF4A1
PPP1R3C
RUVBL1
PCNX1
LINS1
ASB7
UBA2
EEFSEC
TMX1
H3-3A
RPGRIP1L
FTO
KIF18B
SETD4
PSMA4
NDUFAF5