ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116459 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◣ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
METTL25
CCDC59
IDH3B
SUMF1
ATG14
MTRNR2L2
NAGPA
RBM19
MTRNR2L8
NGDN
SPNS1
VPS50
HEPACAM2
HAGH
FAHD1
TRMT1
TMEM242
U2SURP
ZNF830
CCT6B
MRM3
GLOD4
FAM204A
UBE3B
KCTD10
PPWD1
CENPK
MRPS18C
HELQ
ISY1-RAB43
ISY1
MRPL39
GATB
RBM48
PEX1
COMMD9
CDC23
GPATCH3
SMG8
ZC3HC1
ZNF165
ERAL1
MRPL1
EIF2D
COPS7B
TSR3
GNPTG
ZFYVE26
LMAN2
PHF5A
ACO2
GTF3C5
C8orf33
MED6
RTTN
NOC2L
MTRNR2L6
KRR1
SSNA1
ANAPC2
NDUFAF2
ERCC8
PPT1
GET3
SFSWAP
TOMM22
RANBP6
TMEM41A
WASHC2A
POLR3F
DZANK1
TCTN2
TIMM22
BSDC1
PEPD
POLR1F
XAB2
PSMB7
WDR18
TFPT
PRPF31
SUPT7L
SLC4A1AP
TOMM6
MRPL44
TRAPPC2L
GALNS
SCML1
TMEM39A
NDUFS3
KBTBD4
SREK1IP1
CWC27
INTU
ZNRD2
FBXL12
TMEM199
POLDIP2
C16orf91
TRIP4
NDUFS7
PUS10
PEX13
MRPS15
FEM1A
LIN52
ALDH6A1
MRPL45
NCAPH2
LMF2
MTIF2
NUP214
ALG1
BRIX1
COPS5
WASHC2C
DNTTIP2
VIRMA
UQCC1
RNF26
MRPS14
RPTOR
URM1
MAIP1
EIF3H
CWF19L1
TAF3
ADPRS
PDCD6IP
NOL8
CENPP
PELP1
SAP30BP
RECQL5
MRPL55
RRP15
COX10
TMEM126B
DLG2
TIMM17A
YIPF2
TIMM29
DBT
LRRC29
BBS1
IPO11
RBM42
TMEM101
PFDN1
LARS2
MDH1B
FASTKD2
MTERF4
VPS11
EIF1AD
BANF1
NPM3
FAM162A
CCDC58
UBIAD1
C17orf75
TXN2
CRBN
ZMAT2
METAP1D
TSR1
TRIAP1
PMPCA
ENTR1
MTBP
MRPL13
SETD3
CCNK
DNAJC30
BUD23
HBS1L
MRPS22
NSFL1C
MFN2
TMEM203
NDOR1
LONP1
CATSPERD
RPUSD4
FAM118B
METTL16
BRF2
EIF3F
CPSF1
COMMD4
RTN4IP1
QRSL1
WDR74
DNAJC11
TOP3A
SMCR8
BABAM1
PSMC3
GPATCH4
VCPKMT
MRPL58
PIGL
NUP54
MRTO4
EMC1
CEP20
MRPL21
IGHMBP2
HEXA
RCE1
MKS1
NEURL2
CTSA
DDX23
SF3B2
MYL5
ATP5ME
KAT8
QRICH1
C5orf51
PEX19
C12orf43
SLC25A26
CSTF2
MTRNR2L1
BLOC1S1
MRPL2
KLC4
NMT1
DCAKD
NOL11
ATP5MF-PTCD1
ATP5MF
NMNAT1
LZIC
SF3B3
COG4
NUP160
COX16
TACO1
HNRNPA1L2
TAS1R1
NOL9
VPS33A
OAZ3
ZBTB45
UHMK1
TRMO
UTP20
TRMT61B
DPP9
ZFAND2A
PISD
SENP1
PFKM
MNAT1
SUPV3L1
MOCS3
DPM1
USP30
OXNAD1
DPH3
ZNF213
MRPS11
MRPL46
MRPL48
RBX1
SPRYD4
ALKBH3
ZNF17
RPS28
NDUFA7
MRPS31
KCTD5
ZSCAN22
ATP7B
ALG11
VAC14
HMGCL
THUMPD1
TNPO3
RNF6
OS9
RABL3
GTF2E1
USP54
ARFGAP2
MZT2A
SLC25A53
SUGCT
MPLKIP
ERGIC2
DIABLO
PPP1R7
PASK
ABT1
SLC35A3
TM9SF4
DMAC2
TPP1
TEFM
TIMM21
FBXO15
TJAP1
TAF2
DNAJB12
HSPBP1
CDK5RAP1
LYRM4
FARS2
XPO4
KDM4D
CWC15
RANBP3
USP8
POLR1H
TATDN3
NSL1
SMPD4
MZT2B
TARS2
LIN7C
NCAPD2
MRPL51
OSCAR
NDUFA3
MED23
COPS8
OPA1
GRWD1
FBXO28
SEC16A
C9orf163
ANKRD13C
AURKAIP1
MTO1
UBN1
GLYR1
PIGK
ZDHHC6
VTI1A
STX18
DOHH
MRPS10
WDR48
SCN11A
VPS25
WDR53
FBXO45
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PPP1R15B
METTL2B
PCID2
CUL4A
TAF11
SLC35B1
TRMT44
ACOX3
WDR24
ZZZ3
ZNF770
ATXN2L
MPHOSPH10
MCEE
NDUFB5
MRPL47
SLC7A6OS
PRMT7
STX16
DHX35
AP5Z1
DUS2
DDX28
EIF3E
SYF2
ZNF2
MFSD5
TMX2
MED19
PHB2
CCAR2
TMEM217
TBC1D22B
APTX
EMC4
TSN
NOC4L
DDX51
ISCU
SART3
IQCH
AAGAB
HAX1
CCDC43
NUP155
TAX1BP3
EMC6
GCDH
CDKAL1
RFXANK
BORCS8-MEF2B
BORCS8
NDUFA10
EEF1E1
XPC
LSM3
TBRG4
WDR36
LAMP1
ZC3H18
GOLGA3
DHX40
ARFGEF2
YIPF3
POLR1C
RPUSD2
KLHDC4
ZMPSTE24
CACTIN
FDX2
UMPS
POLR2K
LRRC8A
KYAT1
GTF3C3
SNRPC
RPS7
DUS4L-BCAP29
DUS4L
COG5
ACIN1
EFTUD2
CCDC103
RNASEK
ARMC8
WDR83OS
WDR83
TSR2
DDX46
MAGOH
ZCCHC4
ZKSCAN4
EXOSC3
UQCRC1
TIMM44
UBXN11
TBC1D22A
SRPRA
FANCD2
NDUFA9
AKAP3
TRDMT1
TMEM126A
STOML2
NDUFV1
GOSR1
TBC1D23
PUM3
NSUN4
WDR11
MTMR4
NUF2
ZDHHC16
EXOSC1
NDUFAB1
TUFM
SH2B1
MIA3
TRUB1
UBN2
MCOLN1
HIRIP3
PTCD2
MRPS27
TM2D1
NOP16
HIGD2A
MED4
CCDC97
YBEY
MCM3AP
PHAX
ZNF561
SF3A3
TOP3B
ALKBH8
ZNF383
MYSM1
MRPL11
WASHC5
NSMCE2
FAM149B1
ECD
EXOSC9
TEPSIN
NDUFAF8
DLST
MAGOHB
SSBP1
NCSTN
COPA
ANAPC11
ALYREF
GTPBP10
COMMD2
ANKFY1
GPX8
VAMP3
UBL5
MRPS7
GGA3
METTL1
EEF1AKMT3
PTCD3
POLR1A
CXorf56
TERF2IP
KARS1
SDE2
SDHC
DNAJA3
MRPS34
EME2
FAM32A
IPPK
RTEL1
MRPL35
SH3YL1
ACP1
AP3S1
TBC1D19
SPTLC1
MRPL4
MRPS18A
ABRAXAS2
NOB1
L3MBTL2
ZBTB8OS
RBBP4
ZNF497
CWC25
MED9
MRPL20
ZSCAN30
CMTR1
TMEM11
ELP5
CTDNEP1
NXT2
PIGS
TTC31
CCDC142
PEX3
ADAT2
TBC1D17
AKT1S1
SNRPD3
GUCD1
SMU1
B4GALT7
GTF2H3
EIF2B1
TMEM230
ASH2L
GPN1
CCDC121
VPS52
RPS18
PSMB2
FRA10AC1
ZNF461
CHMP4A
NUP107
ZNF408
ARHGAP1
NUFIP1
GPALPP1
OTUB1
PEX14
SLIRP
ALKBH1
MRPS23
SDHAF2
CPSF7
ZWINT
RUVBL2
GYS1
SMG7
RNF166
CTU2
MTOR
NFKBIL1
ATP6V1G2
TBL3
EIF4G2
OSBPL9
TMEM128
REXO4
PRPF38A
ORC1
ATAD3B
GTF2H4
MTX1
MAP3K7
MRPL53
NBAS
AP1G1
ZNF614
ITGB3BP
EFCAB7
DDT
PNPT1
DDTL
RMDN3
ZNF205
SPDL1
ITGB1BP1
CPSF3
WDR4
SELENOH
GFM2
C12orf73
RUVBL1
EEFSEC
MAPKAPK5
FAM104B
ANAPC5
ZNF721
PIGG
MTRNR2L3
SUPT4H1
ATP6V1C1
ATF6B
STK36
RNF25
GBA
MRPL49
FAU
NR1H3
ACP2
IMMP1L
ELP4
VPS41
MRPS35
CEP162
PPP1R10
MRPS18B
GPM6A
SSU72
MRPS17
MED18
GRPEL2
SEC13
MED21
NHP2
TBC1D15
DGUOK
ZBTB11
SEC11A
SRRD
HPS4
SF3B5
MRPL52
DCP1A
ZCCHC10
BHLHB9
ZNF195
NDUFC2-KCTD14
NDUFC2
ANAPC1
MTRF1
THAP10
LRRC49
NDUFA5
AQR
THBS4
MTX3
UQCRB
CHM
RAB3GAP1
SPC25
HIF1AN
DDX19A
PWP1
KANSL2
GCN1
MFSD1
KLHL7
UBE2L6
ATXN7L1
GADD45GIP1
JRK
NOL10
MRPL3
ATRIP
PGGT1B
MRPL27
EME1
NME1
NDUFAF5
ESF1
ZNF622
CSTF2T
ZNF426
GPATCH1
TTC26
ZKSCAN8
PAF1
MED29
RPAIN
NUP88
RPP30
OTUD6B
SCAF11
PSME3
BNIP1
ZNF79
NOLC1
GTF2H2
POLR2J2
MALSU1
EIF4B
GID4
ATPAF2
THOC1
ALG10
FAF2
COQ3
FUZ
DDX49
COPE
AASDH
ZSCAN9
GRN
MED27
WDR20
HSP90AA1
MRPL37
CYB5RL
ATP6V1G1
PCNP
AHCY
ZNF507
SNX1
MYNN
TBCK
AIMP1
SF3B6
FAM228B
COQ5
NELFA
NUDT5
CDC123
PRR3
GNL1
POLR3B
DHDDS
PSMC4
DVL2
PURB
WBP1
RBBP5
SLC33A1
PFAS
ANTKMT
RBM23
BMS1
TFIP11
SDR39U1
MED1
MAZ
PSMB6
TMEM183A
TMEM237
NOXA1
RBM28
FAM98B
CLPTM1L
TBC1D30
GNS
NUP188
DOLK
POMZP3
TBCC
BICRAL
RAD54L2
DNAJC25-GNG10
DNAJC25
NDUFB3
FAM126B
SERP1
EIF2A
FCF1
AREL1
PPIL1
TSFM
NOL12
ZNF292
INTS3
ZNF501
YJU2
NCBP2AS2
NCBP2
ZNF581
SDHB
SRSF11
LRRC40
C1orf109
COPS4
DNAJC13
CDCA8
SPC24
RNASEH1
STARD3
INTS12
GSTCD
EXOSC2
MAF1
RPL37
COPZ1
HTRA2
BRMS1
YARS2
NDUFS4
UBA5
ACAD11
MED28
SENP5
PPAN-P2RY11
PPAN
RPAP1
ATG16L1
ZSWIM1
TIMM50
DOLPP1
PINX1
MUL1
ZNF594
VTA1
NMBR
RPL23A
ILF3
ARMC1
METTL2A
MRPL16
BRCA1
HSD17B10
RNF181
AARSD1
PPIG
DCAF10
LEMD3
ZBED5
NARS1
BORCS7
METTL14
NAT10
PPIL3
NIF3L1
CHCHD1
POLR2J3
C1D
RPL9
LIAS
OSGEPL1
PLAA
IFT74
MRPL22
UBE2L3
NDUFB6
SEC24C
ZFPL1
CDCA5
EXOSC10
MRPL30
MITD1
MARCHF8
ZCRB1
PPHLN1
FAM227B
DTWD1
RBM15
CCDC57
GATAD1
PRKRA
PJVK
SF3B4
ALG10B
TFB2M
CNST
NKAP
SAP18
UTP15
ANKRA2
TUT1
DDX47
COX7A2L
IPO4
HMBOX1
TRAPPC4
RPS25
TOR1AIP1
CHIC1
IKZF2
GOSR2
TBCCD1
DNAJB11
DMAP1
PSMC2
IARS1
USE1
ATG5
RPL22L1
ZNF181
SPOUT1
DCTN4
MICU2
KLHL26
BBS10
WDR61
SIRT3
PSMD13
STYXL1
MDH2
UROS
BCCIP
SDHD
SBDS
CHMP2A
POLR2J
PRKRIP1
TCERG1
DUS1L
BLOC1S6
TMA16
TYW1
ZNF778
XPNPEP3
ST13
TRAPPC8
MRPS28
DNAJC2
KIF15
KIAA1143
CLPTM1
FBXW9
MAN2C1
USP20
C9orf78
SAR1B
PRPF6
PFDN4
TIMM10B
RBPJ
TRUB2
COQ4
FXR1
SENP2
RECQL4
LRRC14
MFSD8
ABHD18
EIF3K
TOMM40L
ZNF304
OST4
RSL24D1
HPS5
GTF2H1
TMEM68
TGS1
ZGRF1
LARP7
PSMD4
LMTK2
LTN1
NIP7
COG8
DSTYK
NDUFV3
VPS37A
CNOT7
MESD
GID8
DIDO1
DCTN6
MRPL40
HIRA
SLC30A9
PTPA
CRAT
NUP133
CCDC77
KDM5A