ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6783963 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◢ SRX186642: hESC H1

◣ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX23740430: SUM 149PT

◢ SRX23740431: SUM 149PT

◢ SRX23740438: SUM 149PT

◢ SRX23740439: SUM 149PT

◢ SRX23740455: SUM 149PT

◢ SRX23740458: SUM 149PT

◢ SRX23740461: SUM 149PT

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
METTL25
CCDC59
IDH3B
SUMF1
MTRNR2L2
ATG14
RBM19
NGDN
NAGPA
VPS50
HEPACAM2
MTRNR2L8
TRMT1
SPNS1
HAGH
FAHD1
U2SURP
MRM3
GLOD4
ZNF830
CCT6B
TMEM242
UBE3B
KCTD10
FAM204A
MRPS18C
HELQ
ISY1-RAB43
ISY1
PPWD1
CENPK
MRPL39
GATB
RBM48
PEX1
GPATCH3
CDC23
COMMD9
SMG8
ZFYVE26
ERAL1
COPS7B
LMAN2
TSR3
GNPTG
ZC3HC1
MRPL1
PHF5A
ACO2
ZNF165
EIF2D
C8orf33
RTTN
MTRNR2L6
NOC2L
GTF3C5
SCML1
MED6
SSNA1
ANAPC2
NDUFAF2
ERCC8
KRR1
GET3
PPT1
SFSWAP
TMEM41A
TOMM22
TCTN2
BSDC1
RANBP6
TIMM22
POLR3F
DZANK1
TMEM39A
POLR1F
PSMB7
SUPT7L
SLC4A1AP
TFPT
PRPF31
SREK1IP1
CWC27
TMEM199
POLDIP2
PEPD
TRAPPC2L
GALNS
MRPL44
XAB2
NDUFS3
KBTBD4
TRIP4
WDR18
ZNRD2
INTU
BRIX1
NCAPH2
LMF2
C16orf91
TOMM6
COPS5
NDUFS7
MRPS15
VIRMA
ALG1
FEM1A
NUP214
FBXL12
WASHC2A
DNTTIP2
PUS10
PEX13
MRPL45
WASHC2C
LIN52
ALDH6A1
MRPS14
RNF26
MRPL55
MTIF2
UQCC1
MAIP1
RBM42
RPTOR
EIF3H
TAF3
EIF1AD
BANF1
SAP30BP
RECQL5
PELP1
RRP15
CWF19L1
COX10
URM1
CRBN
TMEM101
TMEM126B
DLG2
DBT
NOL8
CENPP
MDH1B
FASTKD2
PDCD6IP
MTERF4
ADPRS
PFDN1
MTRNR2L1
LARS2
TSR1
FAM162A
CCDC58
UBIAD1
HBS1L
MRPS22
TIMM17A
YIPF2
TIMM29
TXN2
IPO11
ZMAT2
LRRC29
BBS1
RTN4IP1
QRSL1
PMPCA
ENTR1
TRIAP1
DNAJC30
BUD23
MTBP
MRPL13
METAP1D
NSFL1C
NPM3
VPS11
TMEM203
NDOR1
SETD3
CCNK
C17orf75
GPATCH4
BABAM1
PSMC3
LONP1
CATSPERD
METTL16
RPUSD4
FAM118B
BRF2
EIF3F
WDR74
HEXA
RCE1
SF3B2
TOP3A
SMCR8
PEX19
MFN2
C5orf51
SLC25A26
DNAJC11
C12orf43
NMT1
DCAKD
VCPKMT
CSTF2
COMMD4
NUP54
NUP160
CEP20
MRTO4
EMC1
NMNAT1
LZIC
CPSF1
DDX23
PIGL
NEURL2
CTSA
NOL11
SF3B3
COG4
MKS1
MYL5
ATP5ME
OAZ3
KAT8
MRPL58
MRPL21
IGHMBP2
TRMO
QRICH1
ATP5MF-PTCD1
ATP5MF
BLOC1S1
PISD
MOCS3
DPM1
MRPS11
MRPL46
ZNF213
VPS33A
RBX1
COX16
RPS28
NDUFA7
TACO1
MRPS31
ZBTB45
HNRNPA1L2
SPRYD4
UHMK1
ATXN2L
UTP20
THUMPD1
MRPL2
KLC4
TAS1R1
NOL9
TRMT61B
SENP1
PFKM
OXNAD1
DPH3
MNAT1
DPP9
USP30
TNPO3
SUPV3L1
KCTD5
RABL3
GTF2E1
ALKBH3
MRPL48
ZSCAN22
ZNF17
SUGCT
MPLKIP
DIABLO
MZT2A
VAC14
ABT1
TEFM
PPP1R7
PASK
ATP7B
ALG11
TPP1
TIMM21
FBXO15
ZFAND2A
TAF2
ARFGAP2
DMAC2
OS9
OSCAR
NDUFA3
RNF6
HMGCL
HSPBP1
SLC25A53
KDM4D
CWC15
FBXO28
NCAPD2
MRPL51
TARS2
ERGIC2
COPS8
MED23
OPA1
SEC16A
C9orf163
ANKRD13C
GRWD1
SLC35A3
MRPS10
TJAP1
WDR48
SCN11A
DNAJB12
CDK5RAP1
USP54
SMPD4
MZT2B
WDR53
FBXO45
LYRM4
FARS2
VPS25
DOHH
XPO4
MTO1
USP8
UBN1
GLYR1
LIN7C
TATDN3
NSL1
TMX2
MED19
RANBP3
TRMT44
ACOX3
TM9SF4
AP5Z1
MPHOSPH10
MCEE
EIF3E
PHB2
AURKAIP1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HAX1
APTX
ZDHHC6
VTI1A
PIGK
POLR1H
NOC4L
DDX51
TAF11
STX18
PCID2
CUL4A
SLC35B1
ZZZ3
TAX1BP3
EMC6
GCDH
SLC7A6OS
PRMT7
CCDC43
ZMPSTE24
LAMP1
NDUFB5
MRPL47
STX16
KLHDC4
WDR24
ZNF770
SYF2
CDKAL1
FDX2
TBRG4
WDR36
CCAR2
DUS2
DDX28
MFSD5
DHX35
RPS7
ZNF2
TSN
ISCU
SART3
TMEM217
TBC1D22B
UBXN11
RNASEK
EMC4
SNRPC
IQCH
AAGAB
RFXANK
BORCS8-MEF2B
BORCS8
NUP155
DUS4L-BCAP29
DUS4L
COG5
EEF1E1
ZCCHC4
EFTUD2
CCDC103
XPC
LSM3
ARMC8
TIMM44
DDX46
ZKSCAN4
POLR2K
CACTIN
DHX40
YIPF3
POLR1C
NDUFA10
ACIN1
NDUFA9
AKAP3
TRDMT1
ZC3H18
ARFGEF2
TMEM126A
RPUSD2
GOLGA3
UMPS
STOML2
UQCRC1
NDUFV1
GTF3C3
LRRC8A
KYAT1
MAGOH
WDR83OS
WDR83
PUM3
EXOSC3
NSUN4
TBC1D22A
TSR2
FANCD2
MRPL11
CCDC97
MCOLN1
SRPRA
YBEY
MCM3AP
GOSR1
SF3A3
TOP3B
CXorf56
ZNF383
MRPS7
GGA3
ANKFY1
DLST
WDR11
TBC1D23
SDE2
ABRAXAS2
MTMR4
PTCD3
POLR1A
MRPL35
MRPS34
EME2
UBL5
IPPK
TUFM
SH2B1
TRUB1
NUF2
NDUFAB1
ZDHHC16
EXOSC1
DNAJA3
TERF2IP
KARS1
MIA3
METTL2B
ZBTB8OS
RBBP4
SH3YL1
ACP1
HIRIP3
ELP5
CTDNEP1
MED4
MRPL20
UBN2
TM2D1
PTCD2
MRPS27
MTRNR2L3
PHAX
CWC25
ZSCAN30
DDT
ZNF497
CMTR1
PEX3
ADAT2
NOP16
HIGD2A
TMEM11
TBC1D19
ALKBH8
PIGS
ASH2L
ZNF561
GTF2H3
EIF2B1
MAGOHB
OTUB1
TBC1D17
AKT1S1
WASHC5
NSMCE2
EXOSC9
NCSTN
COPA
PPP1R15B
MYSM1
EIF4G2
SLIRP
ALKBH1
RNF166
CTU2
PEX14
ANAPC11
ALYREF
ZWINT
AP1G1
GTPBP10
ZNF461
SSBP1
RTEL1
GPX8
VAMP3
MRPS18A
METTL1
EEF1AKMT3
NOB1
MRPL53
L3MBTL2
SDHC
FAM32A
RUVBL2
GYS1
ZNF614
COMMD2
TMEM128
GFM2
ITGB3BP
EFCAB7
ZNF205
PNPT1
MAP3K7
MRPL4
PRPF38A
ORC1
C12orf73
RUVBL1
EEFSEC
SELENOH
AP3S1
ITGB1BP1
CPSF3
MED9
ZNF721
PIGG
SNRPD3
GUCD1
VPS41
NUP107
VPS52
RPS18
SMU1
FAM104B
GBA
FRA10AC1
CHMP4A
TTC31
CCDC142
MRPS35
TEPSIN
NDUFAF8
CEP162
TMEM230
ATAD3B
POLR2J2
SEC13
ATP6V1C1
MRPS23
NHP2
PGGT1B
MED21
ZNF408
ARHGAP1
NUFIP1
GPALPP1
B4GALT7
DGUOK
SEC11A
MTOR
STK36
RNF25
NXT2
FAM149B1
ECD
SRRD
HPS4
ZCCHC10
GPN1
CCDC121
NFKBIL1
ATP6V1G2
MTX1
SMG7
PSMB2
SF3B5
MRPS17
DCP1A
GRPEL2
HIF1AN
REXO4
NDUFC2-KCTD14
NDUFC2
SPDL1
SPTLC1
OSBPL9
NBAS
PWP1
SPC25
UQCRB
WDR4
KLHL7
GTF2H4
MRPL49
FAU
ATXN7L1
MAPKAPK5
GCN1
GPATCH1
MFSD1
NOL10
ANAPC5
MRPL3
TTC26
PPP1R10
MRPS18B
SUPT4H1
ATRIP
GADD45GIP1
SDHAF2
CPSF7
UBE2L3
SSU72
PAF1
MED29
MED18
CSTF2T
ZNF622
SCAF11
PSME3
ZKSCAN8
IMMP1L
ELP4
TBL3
NDUFAF5
ESF1
RPP30
ZBTB11
ATP6V1G1
THOC1
BNIP1
DDX49
COPE
TBC1D15
ZNF79
FAF2
EIF4B
PCNP
ZNF195
UBE2L6
ZSCAN9
NOLC1
FUZ
MRPL37
CYB5RL
ZNF507
RMDN3
GID4
ATPAF2
ANAPC1
NDUFA5
THAP10
LRRC49
BHLHB9
THBS4
MTX3
MYNN
SNX1
ATF6B
MALSU1
TBCK
AIMP1
DDX19A
PSMC4
MTRF1
DVL2
MRPL52
SF3B6
FAM228B
AHCY
AQR
NR1H3
ACP2
WDR20
HSP90AA1
ANTKMT
KANSL2
RPAIN
NUP88
WBP1
NELFA
PFAS
YJU2
JRK
DHDDS
COQ5
MRPL27
EME1
CHM
RAB3GAP1
TFIP11
NOXA1
TMEM183A
NME1
TMEM237
DNAJC25-GNG10
DNAJC25
SERP1
EIF2A
TSFM
TBC1D30
GNS
OTUD6B
ZNF292
FCF1
AREL1
DDTL
ALG10
ZNF501
ZNF426
NOL12
PPIL1
SRSF11
LRRC40
ZNF581
RAD54L2
POLR2J
MED27
SENP5
METTL2A
DNAJC13
COQ3
SBDS
ILF3
RNASEH1
GRN
AASDH
TIMM50
PRR3
GNL1
NDUFS4
ZNF594
PPAN-P2RY11
PPAN
MAF1
BMS1
MRPL16
MED28
SLC33A1
C1D
NUDT5
CDC123
POLR3B
METTL14
SEC24C
PURB
BRCA1
RPL23A
OSGEPL1
ZSWIM1
RBM23
COPZ1
RBBP5
MAZ
CHCHD1
PPIL3
NIF3L1
DCAF10
POLR2J3
FAM98B
BORCS7
ZBED5
MED1
CLPTM1L
PSMB6
SF3B4
RBM28
TFB2M
CNST
NUP188
DOLK
NDUFB6
SDR39U1
CCDC57
TOR1AIP1
GATAD1
NCBP2AS2
NCBP2
EXOSC10
DCTN4
MRPL30
MITD1
SDHB
NDUFB3
FAM126B
SAP18
RPL9
LIAS
HMBOX1
FAM227B
DTWD1
INTS3
ZFPL1
CDCA5
TBCC
BICRAL
EXOSC2
MARCHF8
STYXL1
MDH2
RPL22L1
IKZF2
WDR61
TBCCD1
DNAJB11
UTP15
ANKRA2
GOSR2
DDX47
USE1
SPC24
COPS4
MICU2
PSMC2
NKAP
HTRA2
STARD3
RPAP1
DMAP1
UBA5
ACAD11
SDHD
C1orf109
CDCA8
TMA16
RPL37
BRMS1
BBS10
ALG10B
INTS12
GSTCD
DOLPP1
MUL1
PINX1
PPIG
YARS2
SIRT3
PSMD13
PRKRIP1
NFX1
MAN2C1
XPNPEP3
ST13
EIF3K
VTA1
NMBR
CLPTM1
TRAPPC8
SPOUT1
PFDN4
ARMC1
RNF181
RBPJ
MFSD8
ABHD18
USP20
C9orf78
TIMM10B
NDUFV3
NARS1
AARSD1
SAR1B
LEMD3
DSTYK
ZNF304
NAT10
NIP7
COG8
GID8
DIDO1
TOMM40L
DCTN6
HPS5
GTF2H1
NUP133
VPS37A
CNOT7
TRIM23
TRAPPC13
SHLD3
RBM15
OST4
RSL24D1
PLAA
IFT74
ACSF3
LTN1
TUT1
KLHL26
ZNF579
MESD
GFER
HSD17B10
CCDC77
KDM5A
POMZP3
C19orf53
ANAPC10
ABCE1
IARS1
LMTK2
COX7A2L
TRAPPC4
RPS25
IPO4
PRKRA
PJVK
DDX41
TYW1
LRRC57
HAUS2
ZCRB1
PPHLN1
CFAP298-TCP10L
CFAP298
CGGBP1
C3orf38
ATG5
DNAJC2
MINDY2
TXNL4B
DHX38
MTF2
HEMK1
PSMB5
COPS9
WDR75
RPL14
UROS
BCCIP
ZNF276
VPS9D1
CHMP2A
HMGCR
LOC114841035
FKBP2