ChIP-Atlas: Target genes

Potential target genes for KDM5A

Query protein: KDM5A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186642 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
KDM5A's Target genes

◢ KDM5A: Average

◢ SRX3010238: A549

◢ SRX3010239: A549

◢ SRX3010253: GM12878

◢ SRX3010254: GM12878

◢ SRX10476598: Hep G2

◢ SRX10476599: Hep G2

◢ SRX116459: hESC H1

◢ SRX116460: hESC H1

◣ SRX186642: hESC H1

◢ SRX6783963: hESC H1

◢ SRX6783964: hESC H1

◢ SRX8053100: MM.1S

◢ SRX8538839: NB-4

◢ SRX1721564: T-47D

◢ SRX1721565: T-47D

◢ KDM5A: STRING

MTRNR2L9
RGPD2
RGPD1
MTRNR2L10
IDH3B
MTRNR2L2
METTL25
CCDC59
NAGPA
MTRNR2L8
RBM19
SUMF1
TRMT1
NGDN
MRM3
GLOD4
ATG14
ZNF830
CCT6B
HAGH
FAHD1
TMEM242
U2SURP
FAM204A
GATB
ISY1-RAB43
ISY1
MTRNR2L6
CDC23
VPS50
HEPACAM2
MRPL39
GPATCH3
MRPS18C
HELQ
PPWD1
CENPK
TSR3
GNPTG
ZFYVE26
UBE3B
KCTD10
SMG8
COPS7B
RBM48
PEX1
ZNF165
GTF3C5
MRPL1
SPNS1
EIF2D
C8orf33
LMAN2
SFSWAP
MTRNR2L1
RTTN
COMMD9
KRR1
WASHC2A
GET3
RANBP6
ZC3HC1
NDUFAF2
ERCC8
ERAL1
PHF5A
ACO2
TMEM199
POLDIP2
MED6
SSNA1
ANAPC2
TMEM41A
POLR3F
DZANK1
WDR18
TMEM39A
MRPL44
SREK1IP1
CWC27
NOC2L
BRIX1
PSMB7
SUPT7L
SLC4A1AP
NCAPH2
LMF2
TCTN2
TRIP4
INTU
TRAPPC2L
GALNS
NDUFS3
KBTBD4
PUS10
PEX13
TFPT
PRPF31
TOMM22
PPT1
XAB2
ALG1
EIF3H
DNTTIP2
TIMM22
MAIP1
BSDC1
POLR1F
C16orf91
NDUFS7
TOMM6
VIRMA
MRPS15
ZNRD2
PEPD
RNF26
MTERF4
FEM1A
CWF19L1
LARS2
MTIF2
COPS5
SAP30BP
RECQL5
FBXL12
URM1
PDCD6IP
FAM162A
CCDC58
RBM42
MRPS14
UQCC1
NUP214
BABAM1
MRPL45
NOL8
CENPP
RRP15
EIF1AD
BANF1
RPTOR
MRPL55
LRRC29
SETD3
CCNK
MDH1B
FASTKD2
PEX19
TMEM101
EIF3F
CRBN
ADPRS
BBS1
TAF3
TSR1
ZMAT2
HBS1L
LIN52
ALDH6A1
TMEM126B
DLG2
DBT
TMEM203
NDOR1
NPM3
MTBP
MRPL13
PFDN1
PMPCA
ENTR1
WASHC2C
HEXA
DNAJC30
BUD23
UBIAD1
NSFL1C
NMNAT1
LZIC
NUP160
TRIAP1
TIMM17A
BRF2
MKS1
GPATCH4
VPS11
SF3B3
COG4
SF3B2
RTN4IP1
QRSL1
MRPS11
MRPL46
CPSF1
RCE1
TXN2
COX10
MYL5
ATP5ME
YIPF2
TIMM29
MRPS22
SENP1
PFKM
IPO11
MRPL21
IGHMBP2
DDX23
MOCS3
DPM1
HNRNPA1L2
TRMO
SPRYD4
NOL11
CEP20
C5orf51
MRTO4
EMC1
COX16
ATP5MF-PTCD1
ATP5MF
PSMC3
NMT1
DCAKD
COMMD4
MRPL2
KLC4
ZNF213
METTL16
PISD
MRPS31
METAP1D
C12orf43
TACO1
QRICH1
TAS1R1
NOL9
PIGL
TRMT61B
UTP20
NUP54
RBX1
KAT8
NEURL2
CTSA
KCTD5
SUGCT
MPLKIP
C17orf75
ZFAND2A
RABL3
GTF2E1
TOP3A
SMCR8
PELP1
LONP1
CATSPERD
MFN2
TEFM
VPS33A
ZNF17
ZSCAN22
ARFGAP2
WDR74
BLOC1S1
NCAPD2
MRPL51
UHMK1
OXNAD1
DPH3
RPUSD4
FAM118B
HSPBP1
THUMPD1
MRPL58
VCPKMT
GRWD1
ATP7B
ALG11
OAZ3
ZBTB45
SLC25A53
OS9
CDK5RAP1
TATDN3
NSL1
OSCAR
NDUFA3
MZT2A
OPA1
TAF2
XPO4
STX18
TPP1
DNAJC11
MRPL48
FBXO28
LIN7C
DMAC2
VPS25
TARS2
POLR1H
MNAT1
LAMP1
ABT1
TNPO3
VAC14
PPP1R7
PASK
RNF6
KDM4D
CWC15
TJAP1
DNAJB12
WDR24
SLC25A26
ANKRD13C
WDR48
SCN11A
ERGIC2
TMX2
MED19
EIF3E
RNASEK
ZZZ3
USP54
AURKAIP1
MPHOSPH10
MCEE
ALKBH3
SLC7A6OS
PRMT7
COPS8
TIMM21
FBXO15
SLC35A3
TSN
POLR2K
SYF2
MED23
DIABLO
MRPS10
TM9SF4
DUS2
DDX28
USP30
HMGCL
ZDHHC6
VTI1A
NOC4L
DDX51
ZNF770
STX16
TRMT44
ACOX3
CSTF2
XPC
LSM3
DOHH
TBRG4
ZMPSTE24
SEC16A
C9orf163
SUPV3L1
PHB2
WDR53
FBXO45
ZNF2
RPS28
NDUFA7
TAF11
ARMC8
HAX1
DDX46
ZKSCAN4
NDUFB5
MRPL47
USP8
WDR83OS
WDR83
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ALKBH8
SLC35B1
GCDH
WDR36
NDUFV1
FDX2
SMPD4
MZT2B
EXOSC3
NDUFA10
EFTUD2
CCDC103
SNRPC
ISCU
SART3
CCDC43
EEF1E1
RFXANK
BORCS8-MEF2B
BORCS8
TUFM
SH2B1
SRPRA
YBEY
MCM3AP
APTX
KLHDC4
FANCD2
CCAR2
ZC3H18
CDKAL1
ZCCHC4
RPUSD2
MTO1
NUF2
TRUB1
STOML2
DHX35
TAX1BP3
EMC6
LRRC8A
KYAT1
NUP155
NDUFA9
AKAP3
GTF3C3
MRPS17
PUM3
MTRNR2L3
RANBP3
MTMR4
METTL2A
UQCRC1
UBL5
MCOLN1
DPP9
MAP3K7
ZSCAN30
RPS7
TBC1D17
AKT1S1
C12orf73
GTF2H3
EIF2B1
TBC1D22A
ZBTB8OS
RBBP4
CCDC97
ZDHHC16
EXOSC1
TMEM11
ZKSCAN8
PIGK
EMC4
PEX3
ADAT2
UBXN11
ZNF205
NDUFAB1
NFKBIL1
ATP6V1G2
SLIRP
ALKBH1
UBN1
GLYR1
ZNF461
ARFGEF2
MRPL35
ACIN1
MED4
TSR2
COMMD2
SF3A3
SELENOH
PHAX
GOLGA3
SDHC
GBA
AP5Z1
CXorf56
TERF2IP
KARS1
WDR11
PWP1
NSUN4
MED27
NCSTN
COPA
MAPKAPK5
MED9
L3MBTL2
MRPL11
ZNF408
ARHGAP1
AP1G1
RTEL1
ZNF383
PTCD2
MRPS27
GOSR1
TRDMT1
SH3YL1
ACP1
DLST
IQCH
AAGAB
AP3S1
ZBTB11
CWC25
MRPS7
GGA3
MTX1
NXT2
GCN1
TMEM126A
UMPS
ASH2L
FAM32A
SMG7
ZNF561
POLR2J2
TOP3B
GPX8
UQCRB
SPTLC1
TTC31
CCDC142
MRPL53
TMEM230
PCID2
CUL4A
DCP1A
ATAD3B
SPC25
GPATCH1
SSBP1
MRPL20
YIPF3
POLR1C
FAH
ELP5
CTDNEP1
NOP16
HIGD2A
PTCD3
POLR1A
HIRIP3
MED18
GFM2
MRPL4
TEPSIN
NDUFAF8
PSMB2
DDT
DDTL
WDR4
FUZ
NUP107
NBAS
PRPF38A
ORC1
DUS4L-BCAP29
DUS4L
COG5
MTOR
SEC13
SDE2
OSBPL9
TMEM128
METTL1
EEF1AKMT3
ITGB3BP
EFCAB7
TBC1D19
VPS52
RPS18
REXO4
MRPS18A
IMMP1L
ELP4
GTF2H4
FAM104B
MRPL3
SF3B6
FAM228B
LYRM4
FARS2
FAM149B1
ECD
SMU1
CEP162
ANAPC5
MRPS34
EME2
ALG10
TMEM217
TBC1D22B
MFSD5
TMEM183A
SCAF11
MAGOHB
TBC1D23
ATP6V1C1
PSME3
ABRAXAS2
SLC33A1
POMZP3
SEC11A
FRA10AC1
ITGB1BP1
CPSF3
WASHC5
NSMCE2
DHX40
TIMM44
ANAPC1
MIA3
ZNF79
CSTF2T
GRPEL2
SNRPD3
GUCD1
ANKFY1
NOB1
PEX14
RAB3GAP1
ZNF195
MRPS35
EXOSC9
PSMC4
GPN1
CCDC121
FAF2
PCNP
RUVBL1
EEFSEC
MRPS23
DNAJA3
RNF166
CTU2
SRRD
HPS4
GTPBP10
ATXN7L1
NUFIP1
GPALPP1
MRPL49
FAU
ZNF721
PIGG
SPDL1
SF3B5
TM2D1
ANAPC11
ALYREF
NDUFA5
CHMP4A
ZNF497
SUPT4H1
NOL10
NR1H3
ACP2
SSU72
DVL2
MFSD1
PNPT1
CMTR1
VAMP3
METTL14
ZCCHC10
HMBOX1
MAGOH
DDX19A
MTRF1
CHM
AQR
TTC26
RPAIN
NUP88
NELFA
BHLHB9
HIF1AN
FCF1
AREL1
TBCC
BICRAL
NOLC1
PRR3
GNL1
MYSM1
SDHAF2
CPSF7
RAD54L2
SAP18
VPS41
WBP1
IPPK
CACTIN
NOL12
NDUFC2-KCTD14
NDUFC2
EIF4B
SDR39U1
ZNF581
GID4
ATPAF2
ZNF614
NUDT5
CDC123
METTL2B
DHDDS
ATP6V1G1
UBE2L3
RPL9
LIAS
NDUFAF5
ESF1
OSGEPL1
OTUD6B
DNAJC25-GNG10
DNAJC25
OTUB1
MYNN
PPIL1
DNAJC13
ZWINT
RBBP5
PPIL3
NIF3L1
ZNF501
TBL3
STK36
RNF25
MRPL37
CYB5RL
MED28
NME1
ATF6B
KLHL7
NDUFS4
TFIP11
NFX1
RBM23
RBM28
MAZ
THAP10
LRRC49
RMDN3
TMEM237
EIF4G2
TOR1AIP1
ARMC1
DDX49
COPE
PRKRIP1
CLPTM1
THOC1
NOXA1
PPP1R10
MRPS18B
RSL24D1
ILF3
NDUFB3
FAM126B
YJU2
JRK
BORCS7
RNASEH1
B4GALT7
ZNF292
DOLPP1
SDHB
TBC1D30
GNS
GPAM
TMA16
UTP15
ANKRA2
MRPL30
MITD1
PAF1
MED29
TFB2M
CNST
RPP30
UBE2L6
TSFM
MED21
SEC24C
BMS1
TBCK
AIMP1
DGUOK
COQ3
ZNF426
FAM227B
DTWD1
CCDC57
ATRIP
ZNF594
DDX47
TBC1D15
NKAP
TIMM50
THBS4
MTX3
COPS4
GRN
POLR3B
FAM207A
MAN2C1
AASDH
LEMD3
ZSCAN9
UBN2
ALG10B
NDUFB6
NCBP2AS2
NCBP2
GOSR2
PPAN-P2RY11
PPAN
SIRT3
PSMD13
SPC24
CENPW
SERP1
EIF2A
VPS37A
CNOT7
MRPL27
EME1
TBCCD1
DNAJB11
WDR25
WARS1
RBPJ
HTRA2
UBA5
ACAD11
NAT10
TUT1
MAF1
NARS1
GATAD1
ZNF507
TCERG1
DNAJC2
ZNF3
TRAPPC4
RPS25
DCTN6
KIF22
NUP133
MESD
CHCHD1
RPL23A
PLAA
IFT74
BNIP1
PSMB6
BRCA1
RUVBL2
GYS1
ANAPC10
ABCE1
POLR2J3
TRIM23
TRAPPC13
SHLD3
DMAP1
LTN1
ANTKMT
HSD17B10
COQ5
INTS12
GSTCD
PFDN4
SDHD
BLOC1S6
IKZF2
BRMS1
YARS2
FBXW9
RPAP1
RNF181
OXLD1
CCDC137
WDR20
HSP90AA1
ZNF579
METTL17
TRAPPC8
MFSD8
ABHD18
RPL37
ZSWIM1
ZNF181
IVD
EXOSC5
BCKDHA
PINX1
GID8
DIDO1
USE1
C1D
MRPL22
PPIG
VTA1
NMBR
ZNF304
ZBED5
PRPF6
MICU2
MTMR9
STK16
GLB1L
CLN3
MRPS28
TAF9
RAD17
AK6
TDG
QTRT1
KANSL2
ATP6V0D1
SENP2
EIF3K
SBDS
NHP2
TYW1
IARS1
ST7L
CAPZA1
CHMP2A
PEF1
GTPBP3
POLR2J
COPZ1
ABCB8
RBM8A
SRSF11
LRRC40
CCDC77
KDM5A
DPH1
HNRNPH2
GLA
PROSER1
NHLRC3
SLX4IP
CHIC1
RPS6KB2
SLC24A1
FXR1
HEMK1
DCTN4
SAR1B
SPTY2D1
RPL14
WDR61
STARD3
KLHL12
MUL1
CGGBP1
C3orf38
NRAS
CFAP298-TCP10L
CFAP298
MTF2
KLHL26
MALSU1
GMPPB
POLL
DPCD
CBWD5
CBWD3
PRMT5
CBWD6
MED1
TXNL4B
DHX38
PDCD7
ATG5
ZGRF1
LARP7
MRPS30
PLEKHM3
CCDC86
MARCHF8
PURB
PRKRA
PJVK
TMEM216
FAM98B
DDX41
PSMD4
BET1